spacer
spacer

Jump to: InterProScan Databases Documentation FTP site Help Advanced search

InterPro: IPR000590 Hydroxymethylglutaryl-coenzyme A synthase, active site

Protein matchesHelp
UniProtKB
Matches:
166 proteins
AccessionHelp IPR000590 HMG_CoA_synt_AS
TypeHelp Active_site
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR010122 Hydroxymethylglutaryl-CoA synthase, eukaryotic
IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
IPR016039 Thiolase-like
GO Term annotationHelp
Process GO:0008299 isoprenoid biosynthetic process
Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase.

Hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA [1].

HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria [2]. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi [3]. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [4, 5].

This entry represents the sequence surrounding the catalytic cysteine required for nucleophilic attack in the first step of the reaction, the acetylation of the enzyme by acetyl-CoA.

Database linksHelp
PDBe-motif: PS01226
Enzyme: EC:2.3.3.10
PROSITE doc: PDOC00942
Blocks: IPB000590

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000590 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P54839 Hydroxymethylglutaryl-CoA synthase

P54868 Hydroxymethylglutaryl-CoA synthase, mitochondrial

P54869 Hydroxymethylglutaryl-CoA synthase, mitochondrial

P54871 Hydroxymethylglutaryl-CoA synthase

P54873 Hydroxymethylglutaryl-CoA synthase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal
IPR016039 Thiolase-like
IPR000590 Hydroxymethylglutaryl-coenzyme A synthase, active site
IPR010122 Hydroxymethylglutaryl-CoA synthase, eukaryotic
SWISS-MODEL
PDB Chain
ModBase

PublicationsHelp
1. Theisen MJ, Misra I, Saadat D, Campobasso N, Miziorko HM, Harrison DH.
3-hydroxy-3-methylglutaryl-CoA synthase intermediate complex observed in "real-time".
Proc. Natl. Acad. Sci. U.S.A. 101 16442-7 2004 [PubMed: 15498869]
http://dx.doi.org/10.1073/pnas.0405809101
2. Bahnson BJ.
An atomic-resolution mechanism of 3-hydroxy-3-methylglutaryl-CoA synthase.
Proc. Natl. Acad. Sci. U.S.A. 101 16399-400 2004 [PubMed: 15546978]
http://dx.doi.org/10.1073/pnas.0407418101
3. Bearfield JC, Keeling CI, Young S, Blomquist GJ, Tittiger C.
Isolation, endocrine regulation and mRNA distribution of the 3-hydroxy-3-methylglutaryl coenzyme A synthase (HMG-S) gene from the pine engraver, Ips pini (Coleoptera: Scolytidae).
Insect Mol. Biol. 15 187-95 2006 [PubMed: 16640729]
http://dx.doi.org/10.1111/j.1365-2583.2006.00627.x
4. Steussy CN, Robison AD, Tetrick AM, Knight JT, Rodwell VW, Stauffacher CV, Sutherlin AL.
A structural limitation on enzyme activity: the case of HMG-CoA synthase.
Biochemistry 45 14407-14 2006 [PubMed: 17128980]
http://dx.doi.org/10.1021/bi061505q
5. Steussy CN, Vartia AA, Burgner JW 2nd, Sutherlin A, Rodwell VW, Stauffacher CV.
X-ray crystal structures of HMG-CoA synthase from Enterococcus faecalis and a complex with its second substrate/inhibitor acetoacetyl-CoA.
Biochemistry 44 14256-67 2005 [PubMed: 16245942]
http://dx.doi.org/10.1021/bi051487x

Additional ReadingHelp
Rokosz LL, Boulton DA, Butkiewicz EA, Sanyal G, Cueto MA, Lachance PA, Hermes JD.
Human cytoplasmic 3-hydroxy-3-methylglutaryl coenzyme A synthase: expression, purification, and characterization of recombinant wild-type and Cys129 mutant enzymes.
Arch. Biochem. Biophys. 312 1994 1-13 [PubMed: 7913309]
http://dx.doi.org/10.1006/abbi.1994.1273
spacer
spacer
InterPro 23.1