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InterPro: IPR000556 Glycoside hydrolase, 48F
Protein matches
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UniProtKB Matches: 90 proteins |
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Accession
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IPR000556 Glyco_hydro_48F |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR012341 Six-hairpin glycosidase
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GO Term annotation
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Process
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GO:0005975 carbohydrate metabolic process
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Function
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GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
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InterPro annotation
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Entry Details in BioMart
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Abstract
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O-Glycosyl hydrolases EC:3.2.1. are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [1, 2, 3]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [4]. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in clans.
Glycoside hydrolase family 48 GH48 comprises enzymes with several known activities; endoglucanase (EC:3.2.1.4); cellobiohydrolase (EC:3.2.1.91).
The largest cellulase gene sequenced to
date is one of the cellulases (celA) from the genome of the thermophilic anaerobic bacterium Caldocellum saccharolyticum. The celA gene product is a polypeptide of 1751 amino acids; this has a multidomain structure
comprising two catalytic domains and two cellulose-binding domains, linked by Pro-Thr-rich regions. The
N-terminal domain encodes an endoglucanase activity on carboxymethylcellulose, consistent with its similarity
to several endo-1, 4-beta-D-glucanase sequences. The C-terminal domain shows similarity to a cellulase from
Clostridium thermocellum (CelS), which acts synergistically with a second component to hydrolyse crystalline
cellulose [5].
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Structural links
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Database links
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Pfam Clan: CL0059.11
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Publications
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1.
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Henrissat B, Callebaut I, Fabrega S, Lehn P, Mornon JP, Davies G.
Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.
Proc. Natl. Acad. Sci. U.S.A. 92 7090-4 1995
[PubMed: 7624375]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=7624375&action=stream&blobtype=pdf
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2.
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Davies G, Henrissat B.
Structures and mechanisms of glycosyl hydrolases.
Structure 3 853-9 1995
[PubMed: 8535779]
http://dx.doi.org/10.1016/S0969-2126(01)00220-9
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3.
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Bairoch A.
Classification of glycosyl hydrolase families and index of glycosyl hydrolase entries in SWISS-PROT.
1999
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4.
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Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999
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5.
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Te'o VS, Saul DJ, Bergquist PL.
celA, another gene coding for a multidomain cellulase from the extreme thermophile Caldocellum saccharolyticum.
Appl. Microbiol. Biotechnol. 43 291-6 1995
[PubMed: 7612247]
http://dx.doi.org/10.1007/s002530050405
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Additional Reading
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Parsiegla G, Reverbel C, Tardif C, Driguez H, Haser R.
Structures of mutants of cellulase Cel48F of Clostridium cellulolyticum in complex with long hemithiocellooligosaccharides give rise to a new view of the substrate pathway during processive action.
J. Mol. Biol. 375 2008 499-510
[PubMed: 18035374]
http://dx.doi.org/10.1016/j.jmb.2007.10.039
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Parsiegla G, Juy M, Reverbel-Leroy C, Tardif C, Belaich JP, Driguez H, Haser R.
The crystal structure of the processive endocellulase CelF of Clostridium cellulolyticum in complex with a thiooligosaccharide inhibitor at 2.0 A resolution.
EMBO J. 17 1998 5551-62
[PubMed: 9755156]
http://dx.doi.org/10.1093/emboj/17.19.5551
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Guimaraes BG, Souchon H, Lytle BL, David Wu JH, Alzari PM.
The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome.
J. Mol. Biol. 320 2002 587-96
[PubMed: 12096911]
http://dx.doi.org/10.1016/S0022-2836(02)00497-7
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Parsiegla G, Reverbel-Leroy C, Tardif C, Belaich JP, Driguez H, Haser R.
Crystal structures of the cellulase Cel48F in complex with inhibitors and substrates give insights into its processive action.
Biochemistry 39 2000 11238-46
[PubMed: 10985769]
http://dx.doi.org/10.1021/bi001139p
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el Hassouni M, Henrissat B, Chippaux M, Barras F.
Nucleotide sequences of the arb genes, which control beta-glucoside utilization in Erwinia chrysanthemi: comparison with the Escherichia coli bgl operon and evidence for a new beta-glycohydrolase family including enzymes from eubacteria, archeabacteria, and humans.
J. Bacteriol. 174 1992 765-77
[PubMed: 1732212]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=1732212&action=stream&blobtype=pdf
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InterPro 23.1
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