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InterPro: IPR000421 Coagulation factor 5/8 type, C-terminal
Protein matches
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UniProtKB Matches: 3133 proteins |
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Accession
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IPR000421 Coagulation_factor_5/8-type_C |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR008979 Galactose-binding domain-like
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Found in
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IPR012111 Hemolectin/hemocytin
IPR014648 Neuropilin
IPR014707 Coagulation factor VIII
IPR020742 Tyrosine-protein kinase, discoidin domain-containing receptor
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GO Term annotation
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Process
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GO:0007155 cell adhesion
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Blood coagulation factors V and VIII contain a C-terminal, twice repeated,
domain of about 150 amino acids, which is called F5/8 type C, FA58C, or C1/C2-
like domain. In the Dictyostelium discoideum (Slime mold) cell adhesion protein discoidin, a related
domain, named discoidin I-like domain, DLD, or DS, has been found which shares
a common C-terminal region of about 110 amino acids with the FA58C domain, but
whose N-terminal 40 amino acids are much less conserved. Similar domains have
been detected in other extracellular and membrane proteins [1, 2, 3]
In coagulation factors V and VIII the repeated domains compose part of a
larger functional domain which promotes binding to anionic phospholipids on
the surface of platelets and endothelial cells [4]. The C-terminal domain of
the second FA58C repeat (C2) of coagulation factor VIII has been shown to be
responsible for phosphatidylserine-binding and essential for activity [5, 6].
It forms an amphipathic alpha-helix, which binds to the membrane [7].
FA58C contains two conserved cysteines in most proteins, which link the
extremities of the domain by a disulphide bond [8, 9, 10]. A further disulphide
bond is located near the C-terminal of the second FA58C domain in MFGM Q08431 [10].
+------------------------------------------------------------------------+
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CxPLGxxQITASxxxxxRLxxxWxxxxWxxxxxxQGxxxxxxxxxxxxGNxxxxxxxxxxRxPxcxcLRxExGC
'C': conserved cysteine involved in a disulphide bond.
'c': cysteine involved in a disulphide bond in MFGM Q08431.
'x': any amino acid.
upper case letters: conserved residues.
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Structural links
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Database links
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Pfam Clan: CL0202.7
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Publications
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1.
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Kane WH, Davie EW.
Cloning of a cDNA coding for human factor V, a blood coagulation factor homologous to factor VIII and ceruloplasmin.
Proc. Natl. Acad. Sci. U.S.A. 83 6800-4 1986
[PubMed: 3092220]
http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=3092220&action=stream&blobtype=pdf
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2.
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Johnson JD, Edman JC, Rutter WJ.
A receptor tyrosine kinase found in breast carcinoma cells has an extracellular discoidin I-like domain.
Proc. Natl. Acad. Sci. U.S.A. 90 5677-81 1993
[PubMed: 8390675]
http://ukpmc.ac.uk/articlerender.cgi?tool=EBI&pubmedid=8390675
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3.
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Couto JR, Taylor MR, Godwin SG, Ceriani RL, Peterson JA.
Cloning and sequence analysis of human breast epithelial antigen BA46 reveals an RGD cell adhesion sequence presented on an epidermal growth factor-like domain.
DNA Cell Biol. 15 281-6 1996
[PubMed: 8639264]
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4.
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Kane WH, Davie EW.
Blood coagulation factors V and VIII: structural and functional similarities and their relationship to hemorrhagic and thrombotic disorders.
Blood 71 539-55 1988
[PubMed: 3125864]
http://www.bloodjournal.org/cgi/content/abstract/71/3/539
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5.
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Foster PA, Fulcher CA, Houghten RA, Zimmerman TS.
Synthetic factor VIII peptides with amino acid sequences contained within the C2 domain of factor VIII inhibit factor VIII binding to phosphatidylserine.
Blood 75 1999-2004 1990
[PubMed: 2110840]
http://www.bloodjournal.org/cgi/content/abstract/75/10/1999
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6.
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Ortel TL, Quinn-Allen MA, Keller FG, Peterson JA, Larocca D, Kane WH.
Localization of functionally important epitopes within the second C-type domain of coagulation factor V using recombinant chimeras.
J. Biol. Chem. 269 15898-905 1994
[PubMed: 7515064]
http://intl.jbc.org/cgi/content/abstract/269/22/15898
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7.
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Gilbert GE, Baleja JD.
Membrane-binding peptide from the C2 domain of factor VIII forms an amphipathic structure as determined by NMR spectroscopy.
Biochemistry 34 3022-31 1995
[PubMed: 7893714]
http://dx.doi.org/10.1021/bi00009a033
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8.
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Xue J, Kalafatis M, Mann KG.
Determination of the disulfide bridges in factor Va light chain.
Biochemistry 32 5917-23 1993
[PubMed: 8504111]
http://dx.doi.org/10.1021/bi00073a026
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9.
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McMullen BA, Fujikawa K, Davie EW, Hedner U, Ezban M.
Locations of disulfide bonds and free cysteines in the heavy and light chains of recombinant human factor VIII (antihemophilic factor A).
Protein Sci. 4 740-6 1995
[PubMed: 7613471]
http://www.proteinscience.org/cgi/content/abstract/4/4/740
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10.
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Hvarregaard J, Andersen MH, Berglund L, Rasmussen JT, Petersen TE.
Characterization of glycoprotein PAS-6/7 from membranes of bovine milk fat globules.
Eur. J. Biochem. 240 628-36 1996
[PubMed: 8856064]
http://dx.doi.org/10.1111/j.1432-1033.1996.0628h.x
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Additional Reading
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Shao C, Novakovic VA, Head JF, Seaton BA, Gilbert GE.
Crystal structure of lactadherin C2 domain at 1.7A resolution with mutational and computational analyses of its membrane-binding motif.
J. Biol. Chem. 283 2008 7230-41
[PubMed: 18160406]
http://dx.doi.org/10.1074/jbc.M705195200
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Baumgartner S, Hofmann K, Chiquet-Ehrismann R, Bucher P.
The discoidin domain family revisited: new members from prokaryotes and a homology-based fold prediction.
Protein Sci. 7 1998 1626-31
[PubMed: 9684896]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=9684896
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Rogers MS, Hurtado-Guerrero R, Firbank SJ, Halcrow MA, Dooley DM, Phillips SE, Knowles PF, McPherson MJ.
Cross-link formation of the cysteine 228-tyrosine 272 catalytic cofactor of galactose oxidase does not require dioxygen.
Biochemistry 47 2008 10428-39
[PubMed: 18771294]
http://dx.doi.org/10.1021/bi8010835
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Rogers MS, Tyler EM, Akyumani N, Kurtis CR, Spooner RK, Deacon SE, Tamber S, Firbank SJ, Mahmoud K, Knowles PF, Phillips SE, McPherson MJ, Dooley DM.
The stacking tryptophan of galactose oxidase: a second-coordination sphere residue that has profound effects on tyrosyl radical behavior and enzyme catalysis.
Biochemistry 46 2007 4606-18
[PubMed: 17385891]
http://dx.doi.org/10.1021/bi062139d
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Ramelot TA, Raman S, Kuzin AP, Xiao R, Ma LC, Acton TB, Hunt JF, Montelione GT, Baker D, Kennedy MA.
Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study.
Proteins 75 2009 147-67
[PubMed: 18816799]
http://dx.doi.org/10.1002/prot.22229
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Lin L, Huai Q, Huang M, Furie B, Furie BC.
Crystal structure of the bovine lactadherin C2 domain, a membrane binding motif, shows similarity to the C2 domains of factor V and factor VIII.
J. Mol. Biol. 371 2007 717-24
[PubMed: 17583728]
http://dx.doi.org/10.1016/j.jmb.2007.05.054
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