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InterPro: IPR000334 Glycoside hydrolase, family 45
Protein matches
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UniProtKB Matches: 134 proteins |
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Accession
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IPR000334 Glyco_hydro_45 |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR014733 Barwin-like endoglucanase
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GO Term annotation
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Process
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GO:0005975 carbohydrate metabolic process
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Function
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GO:0008810 cellulase activity
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InterPro annotation
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Entry Details in BioMart
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Abstract
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O-Glycosyl hydrolases EC:3.2.1. are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [1, 2, 3]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [4]. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in clans.
Glycoside hydrolase family 45 GH45 comprises enzymes with only one known activity; endoglucanase (EC:3.2.1.4).
The microbial degradation of cellulose and xylans requires several types of
enzymes such as endoglucanases, cellobiohydrolases (EC:3.2.1.91)
(exoglucanases), or xylanases (EC:3.2.1.8) [5, 6].
Fungi and bacteria produce
a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the
basis of sequence similarities, can be classified into families. One of these
families is known as the cellulase family K or as the glycosyl hydrolases
family 45 [7].
The best conserved regions in these enzymes is located in the N-terminal
section. It contains an aspartic acid residue which has been shown [8] to act
as a nucleophile in the catalytic mechanism.
This also has several cysteines that are involved in forming disulphide bridges.
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Structural links
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Database links
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Pfam Clan: CL0199.8
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Publications
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1.
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Henrissat B, Callebaut I, Fabrega S, Lehn P, Mornon JP, Davies G.
Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.
Proc. Natl. Acad. Sci. U.S.A. 92 7090-4 1995
[PubMed: 7624375]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=7624375&action=stream&blobtype=pdf
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2.
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Davies G, Henrissat B.
Structures and mechanisms of glycosyl hydrolases.
Structure 3 853-9 1995
[PubMed: 8535779]
http://dx.doi.org/10.1016/S0969-2126(01)00220-9
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3.
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Bairoch A.
Classification of glycosyl hydrolase families and index of glycosyl hydrolase entries in SWISS-PROT.
1999
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4.
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Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999
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5.
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Beguin P.
Molecular biology of cellulose degradation.
Annu. Rev. Microbiol. 44 219-48 1990
[PubMed: 2252383]
http://dx.doi.org/10.1146/annurev.mi.44.100190.001251
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6.
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Gilkes NR, Henrissat B, Kilburn DG, Miller RC Jr, Warren RA.
Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families.
Microbiol. Rev. 55 303-15 1991
[PubMed: 1886523]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=1886523
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7.
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Henrissat B, Bairoch A.
New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.
Biochem. J. 293 ( Pt 3) 781-8 1993
[PubMed: 8352747]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=8352747&action=stream&blobtype=pdf
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8.
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Davies GJ, Dodson GG, Hubbard RE, Tolley SP, Dauter Z, Wilson KS, Hjort C, Mikkelsen JM, Rasmussen G, Schulein M.
Structure and function of endoglucanase V.
Nature 365 362-4 1993
[PubMed: 8377830]
http://dx.doi.org/10.1038/365362a0
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Additional Reading
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Valjakka J, Rouvinen J.
Structure of 20K endoglucanase from Melanocarpus albomyces at 1.8 A resolution.
Acta Crystallogr. D Biol. Crystallogr. 59 2003 765-8
[PubMed: 12657806]
http://dx.doi.org/10.1107/S0907444903002051
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Davies GJ, Tolley SP, Henrissat B, Hjort C, Schulein M.
Structures of oligosaccharide-bound forms of the endoglucanase V from Humicola insolens at 1.9 A resolution.
Biochemistry 34 1995 16210-20
[PubMed: 8519779]
http://dx.doi.org/10.1021/bi00049a037
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Davies GJ, Dodson G, Moore MH, Tolley SP, Dauter Z, Wilson KS, Rasmussen G, Schulein M.
Structure determination and refinement of the Humicola insolens endoglucanase V at 1.5 A resolution.
Acta Crystallogr. D Biol. Crystallogr. 52 1996 7-17
[PubMed: 15299721]
http://dx.doi.org/10.1107/S0907444995009280
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Hirvonen M, Papageorgiou AC.
Crystal structure of a family 45 endoglucanase from Melanocarpus albomyces: mechanistic implications based on the free and cellobiose-bound forms.
J. Mol. Biol. 329 2003 403-10
[PubMed: 12767825]
http://dx.doi.org/10.1016/S0022-2836(03)00467-4
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InterPro 23.1
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