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InterPro: IPR000023 Phosphofructokinase

Protein matchesHelp
UniProtKB
Matches:
2398 proteins
AccessionHelp IPR000023 Phosphofructokinase
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Children IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB
IPR011403 Pyrophosphate-dependent phosphofructokinase, TM0289
IPR011404 Phosphofructokinase, XF0274
IPR011405 Pyrophosphate-dependent phosphofructokinase, SMc01852
IPR012003 ATP-dependent phosphofructokinase, prokaryotic
IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108
Found in IPR009161 6-phosphofructokinase, eukaryotic type
Contains IPR013981 Pyrophosphate-dependent phosphofructokinase, alpha-helical
IPR015912 Phosphofructokinase, conserved site
GO Term annotationHelp
Process GO:0006096 glycolysis
Function GO:0003872 6-phosphofructokinase activity
Component GO:0005945 6-phosphofructokinase complex
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [1]. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [2, 3]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains [3]).

PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [4], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react [4].

Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise [3]. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [3].

Structural linksHelp
SCOP: c.89.1.1
Database linksHelp
Enzyme: EC:2.7.1.11
PANDIT: PF00365
Blocks: IPB000023
Pfam Clan: CL0240.4

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000023 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P08237 6-phosphofructokinase, muscle type

P12382 6-phosphofructokinase, liver type

P16861 6-phosphofructokinase subunit alpha

P52034 6-phosphofructokinase

Q27483 Probable 6-phosphofructokinase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR015912 Phosphofructokinase, conserved site
IPR000023 Phosphofructokinase
IPR009161 6-phosphofructokinase, eukaryotic type
SWISS-MODEL
ModBase

PublicationsHelp
1. Hellinga HW, Evans PR.
Mutations in the active site of Escherichia coli phosphofructokinase.
Nature 327 437-9 1987 [PubMed: 2953977]
http://dx.doi.org/10.1038/327437a0
2. Wegener G, Krause U.
Different modes of activating phosphofructokinase, a key regulatory enzyme of glycolysis, in working vertebrate muscle.
Biochem. Soc. Trans. 30 264-70 2002 [PubMed: 12023862]
http://dx.doi.org/10.1042/0300-5127:0300264
3. Raben N, Exelbert R, Spiegel R, Sherman JB, Nakajima H, Plotz P, Heinisch J.
Functional expression of human mutant phosphofructokinase in yeast: genetic defects in French Canadian and Swiss patients with phosphofructokinase deficiency.
Am. J. Hum. Genet. 56 131-41 1995 [PubMed: 7825568]
http://ukpmc.ac.uk/articlerender.cgi?tool=EBI&pubmedid=7825568
4. Shirakihara Y, Evans PR.
Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction products.
J. Mol. Biol. 204 973-94 1988 [PubMed: 2975709]
http://dx.doi.org/10.1016/0022-2836(88)90056-3

Additional ReadingHelp
Paricharttanakul NM, Ye S, Menefee AL, Javid-Majd F, Sacchettini JC, Reinhart GD.
Kinetic and structural characterization of phosphofructokinase from Lactobacillus bulgaricus.
Biochemistry 44 2005 15280-6 [PubMed: 16285731]
http://dx.doi.org/10.1021/bi051283g
Moore SA, Ronimus RS, Roberson RS, Morgan HW.
The structure of a pyrophosphate-dependent phosphofructokinase from the Lyme disease spirochete Borrelia burgdorferi.
Structure 10 2002 659-71 [PubMed: 12015149]
http://dx.doi.org/10.1016/S0969-2126(02)00760-8
Riley-Lovingshimer MR, Ronning DR, Sacchettini JC, Reinhart GD.
Reversible ligand-induced dissociation of a tryptophan-shift mutant of phosphofructokinase from Bacillus stearothermophilus.
Biochemistry 41 2002 12967-74 [PubMed: 12390023]
http://dx.doi.org/10.1021/bi0263412
Schirmer T, Evans PR.
Structural basis of the allosteric behaviour of phosphofructokinase.
Nature 343 1990 140-5 [PubMed: 2136935]
http://dx.doi.org/10.1038/343140a0
Rypniewski WR, Evans PR.
Crystal structure of unliganded phosphofructokinase from Escherichia coli.
J. Mol. Biol. 207 1989 805-21 [PubMed: 2527305]
http://dx.doi.org/10.1016/0022-2836(89)90246-5
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InterPro 23.1