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InterPro: IPR002676 RimM protein

Protein matches Help

UniProtKB

Matches:

1510 proteins

Overview:	sorted by AC,	sorted by name,	of known structure,	proteins with splice variants
Detailed:	sorted by AC,	sorted by name,	of known structure	proteins with splice variants
Table:	For all matching proteins,	of known structure
Architectures
Accession List
Matches in BioMart

Accession

IPR002676 RimM

Type

Domain

Signatures Help

Database	ID	Name	Proteins
Pfam	PF01782	RimM	1510
Signatures in BioMart

InterPro Relationships Help

Found in

IPR011961 16S rRNA processing protein RimM

GO Term annotation Help

Process

GO:0006364 rRNA processing

InterPro annotation

Entry Details in BioMart

Abstract

The RimM protein is essential for efficient processing of 16S rRNA [1]. The RimM protein was shown to have affinity for free ribosomal 30S subunits but not for 30S subunits in the 70S ribosomes [1].

Structural links Help

PDB - click here

SCOP: b.43.3.4

CATH: 2.40.30.60

Database links Help

PANDIT: PF01782

Blocks: IPB002676

Taxonomic coverage Help

Overlapping InterPro entries Help

IPR002676

Numbers of overlapping proteins

Average numbers of overlapping amino acids

Example proteins Help

A2BTI7 Ribosome maturation factor rimM

P44568 Ribosome maturation factor rimM

P74035 Ribosome maturation factor rimM

More proteins

Example Proteins Key

InterPro entry accession number/name and structure databases		Colour code
IPR007903	PRC-barrel
IPR011033	PRC-barrel-like
IPR011961	16S rRNA processing protein RimM
IPR002676	RimM protein
	SWISS-MODEL
	PDB Chain

Publications Open in usermanual
1.	Bylund GO, Wipemo LC, Lundberg LA, Wikstrom PM. RimM and RbfA are essential for efficient processing of 16S rRNA in Escherichia coli. J. Bacteriol. 180 73-82 1998 [PubMed: 9422595] http://ukpmc.ac.uk/articlerender.cgi?tool=EBI&pubmedid=9422595

Additional Reading Open in usermanual
	Anantharaman V, Aravind L. The PRC-barrel: a widespread, conserved domain shared by photosynthetic reaction center subunits and proteins of RNA metabolism. Genome Biol. 3 2002 RESEARCH0061 [PubMed: 12429060] http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=12429060&action=stream&blobtype=pdf

InterPro 23.1