Please wait...
loading   Loading...
What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 23289620

Journal: FEBS J. (1742-464X)

Year of Publication: 2013

Title: Tetraspanin protein CD9 interacts with metalloprotease CD10 and enhances its release via exosomes.

Author List: Mazurov D., Barbashova L., Filatov A.

Cross References:

Experiment (2 interactions)

Accession: EBI-8293559

Name: mazurov-2013-3

Host organism: Homo sapiens NALM-6 B cell precursor leukemia cells

Organism: Homo sapiens NALM-6 B cell precursor leukemia cells

Accession: EBI-1373038

Name: human-nalm_6

Description: Homo sapiens NALM-6 B cell precursor leukemia cells

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Interaction Detection Method: anti bait coip

Interaction detection method: anti bait coip
Accession: EBI-976

Name: anti bait coip

Description: anti bait coimmunoprecipitation

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
7708014
-
primary-reference
psi-mi
MI:0006
-
identity


Annotations:
Topic
Text
definition
A specific antibody for the molecule of interest (bait) is available, this is used to generate a high affinity resin to capture the endogenous bait present in a sample.


Participant Identification Method: experimental particp

Participant identification method: experimental particp
Accession: EBI-933978

Name: experimental particp

Description: experimental participant identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0661
-
identity


Annotations:
Topic
Text
definition
experimental participant identification.


Cross References:

Annotations:

Topic
Text
dvmazurov@yandex.ru

Interaction

Accession: EBI-8293769

Name: mme-anxa6

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
homomint
mint
T1 F1A

Participants (12)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
1
EBI-353759
 logo
dastyLogo
MME
EPN
Neutral endopeptidase 24.11

[+4]
Neprilysin
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0496
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Neprilysin

Participant: Neprilysin

Accession: EBI-8293786

Name: EBI-353759

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Neprilysin

Participant: Neprilysin

Accession: EBI-8293786

Name: EBI-353759

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Neprilysin

Participant: Neprilysin

Accession: EBI-8293786

Name: EBI-353759

Stoichiometry: 0.0

F
Participant: Neprilysin

Participant: Neprilysin

Accession: EBI-8293786

Name: EBI-353759

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Neprilysin

Participant: Neprilysin

Accession: EBI-8293786

Name: EBI-353759

Confidences:

Type
Value
No records found.

2
EBI-5457304
 logo
dastyLogo
FAM207A
C21orf70
PRED56
Protein FAM207A
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein FAM207A

Participant: Protein FAM207A

Accession: EBI-8293774

Name: EBI-5457304

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Protein FAM207A

Participant: Protein FAM207A

Accession: EBI-8293774

Name: EBI-5457304

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein FAM207A

Participant: Protein FAM207A

Accession: EBI-8293774

Name: EBI-5457304

Stoichiometry: 0.0

F
Participant: Protein FAM207A

Participant: Protein FAM207A

Accession: EBI-8293774

Name: EBI-5457304

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein FAM207A

Participant: Protein FAM207A

Accession: EBI-8293774

Name: EBI-5457304

Confidences:

Type
Value
No records found.

3
EBI-352541
 logo
dastyLogo
ANXA6
ANX6
Annexin-6

[+8]
Annexin A6
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Annexin A6

Participant: Annexin A6

Accession: EBI-8293778

Name: EBI-352541

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Annexin A6

Participant: Annexin A6

Accession: EBI-8293778

Name: EBI-352541

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Annexin A6

Participant: Annexin A6

Accession: EBI-8293778

Name: EBI-352541

Stoichiometry: 0.0

F
Participant: Annexin A6

Participant: Annexin A6

Accession: EBI-8293778

Name: EBI-352541

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Annexin A6

Participant: Annexin A6

Accession: EBI-8293778

Name: EBI-352541

Confidences:

Type
Value
No records found.

4
EBI-1222221
 logo
dastyLogo
IGLL1
IGL1
Immunoglobulin-related protein 14.1

[+3]
Immunoglobulin lambda-like polypeptide 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Immunoglobulin lambda-like polypeptide 1

Participant: Immunoglobulin lambda-like polypeptide 1

Accession: EBI-8293782

Name: EBI-1222221

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Immunoglobulin lambda-like polypeptide 1

Participant: Immunoglobulin lambda-like polypeptide 1

Accession: EBI-8293782

Name: EBI-1222221

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Immunoglobulin lambda-like polypeptide 1

Participant: Immunoglobulin lambda-like polypeptide 1

Accession: EBI-8293782

Name: EBI-1222221

Stoichiometry: 0.0

F
Participant: Immunoglobulin lambda-like polypeptide 1

Participant: Immunoglobulin lambda-like polypeptide 1

Accession: EBI-8293782

Name: EBI-1222221

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Immunoglobulin lambda-like polypeptide 1

Participant: Immunoglobulin lambda-like polypeptide 1

Accession: EBI-8293782

Name: EBI-1222221

Confidences:

Type
Value
No records found.

5
EBI-5456022
 logo
dastyLogo
NOP9
C14orf21
KIAA2021
Nucleolar protein 9
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Nucleolar protein 9

Participant: Nucleolar protein 9

Accession: EBI-8293790

Name: EBI-5456022

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Nucleolar protein 9

Participant: Nucleolar protein 9

Accession: EBI-8293790

Name: EBI-5456022

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Nucleolar protein 9

Participant: Nucleolar protein 9

Accession: EBI-8293790

Name: EBI-5456022

Stoichiometry: 0.0

F
Participant: Nucleolar protein 9

Participant: Nucleolar protein 9

Accession: EBI-8293790

Name: EBI-5456022

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Nucleolar protein 9

Participant: Nucleolar protein 9

Accession: EBI-8293790

Name: EBI-5456022

Confidences:

Type
Value
No records found.

6
EBI-8293751
 logo
dastyLogo
GUCD1
C22orf13
Guanylyl cyclase domain-containing protein 1

[+2]
Protein GUCD1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein GUCD1

Participant: Protein GUCD1

Accession: EBI-8293794

Name: EBI-8293751

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Protein GUCD1

Participant: Protein GUCD1

Accession: EBI-8293794

Name: EBI-8293751

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein GUCD1

Participant: Protein GUCD1

Accession: EBI-8293794

Name: EBI-8293751

Stoichiometry: 0.0

F
Participant: Protein GUCD1

Participant: Protein GUCD1

Accession: EBI-8293794

Name: EBI-8293751

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein GUCD1

Participant: Protein GUCD1

Accession: EBI-8293794

Name: EBI-8293751

Confidences:

Type
Value
No records found.

7
EBI-2839473
 logo
dastyLogo
HLA-A
HLAA
MHC class I antigen A*2
HLA class I histocompatibility antigen, A-2 alpha chain
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Accession: EBI-8293798

Name: EBI-2839473

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Accession: EBI-8293798

Name: EBI-2839473

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Accession: EBI-8293798

Name: EBI-2839473

Stoichiometry: 0.0

F
Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Accession: EBI-8293798

Name: EBI-2839473

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Participant: HLA class I histocompatibility antigen, A-2 alpha chain

Accession: EBI-8293798

Name: EBI-2839473

Confidences:

Type
Value
No records found.

8
EBI-3865697
 logo
dastyLogo
HLA-DRB1
MHC class II antigen DRB1*1
HLA class II histocompatibility antigen, DRB1-1 beta chain
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Accession: EBI-8293802

Name: EBI-3865697

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Accession: EBI-8293802

Name: EBI-3865697

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Accession: EBI-8293802

Name: EBI-3865697

Stoichiometry: 0.0

F
Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Accession: EBI-8293802

Name: EBI-3865697

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Participant: HLA class II histocompatibility antigen, DRB1-1 beta chain

Accession: EBI-8293802

Name: EBI-3865697

Confidences:

Type
Value
No records found.

9
EBI-395649
 logo
dastyLogo
CMSS1
C3orf26
Cms1 ribosomal small subunit homolog
Protein CMSS1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein CMSS1

Participant: Protein CMSS1

Accession: EBI-8293806

Name: EBI-395649

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Protein CMSS1

Participant: Protein CMSS1

Accession: EBI-8293806

Name: EBI-395649

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein CMSS1

Participant: Protein CMSS1

Accession: EBI-8293806

Name: EBI-395649

Stoichiometry: 0.0

F
Participant: Protein CMSS1

Participant: Protein CMSS1

Accession: EBI-8293806

Name: EBI-395649

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein CMSS1

Participant: Protein CMSS1

Accession: EBI-8293806

Name: EBI-395649

Confidences:

Type
Value
No records found.

10
EBI-4280101
 logo
dastyLogo
CD9
MIC3
TSPAN29

[+7]
CD9 antigen
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: CD9 antigen

Participant: CD9 antigen

Accession: EBI-8293810

Name: EBI-4280101

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: CD9 antigen

Participant: CD9 antigen

Accession: EBI-8293810

Name: EBI-4280101

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: CD9 antigen

Participant: CD9 antigen

Accession: EBI-8293810

Name: EBI-4280101

Stoichiometry: 0.0

F
Participant: CD9 antigen

Participant: CD9 antigen

Accession: EBI-8293810

Name: EBI-4280101

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: CD9 antigen

Participant: CD9 antigen

Accession: EBI-8293810

Name: EBI-4280101

Confidences:

Type
Value
No records found.

11
EBI-2817289
 logo
dastyLogo
DAAM1
KIAA0666
Disheveled-associated activator of morphogenesis 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Disheveled-associated activator of morphogenesis 1

Participant: Disheveled-associated activator of morphogenesis 1

Accession: EBI-8293814

Name: EBI-2817289

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: Disheveled-associated activator of morphogenesis 1

Participant: Disheveled-associated activator of morphogenesis 1

Accession: EBI-8293814

Name: EBI-2817289

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Disheveled-associated activator of morphogenesis 1

Participant: Disheveled-associated activator of morphogenesis 1

Accession: EBI-8293814

Name: EBI-2817289

Stoichiometry: 0.0

F
Participant: Disheveled-associated activator of morphogenesis 1

Participant: Disheveled-associated activator of morphogenesis 1

Accession: EBI-8293814

Name: EBI-2817289

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Disheveled-associated activator of morphogenesis 1

Participant: Disheveled-associated activator of morphogenesis 1

Accession: EBI-8293814

Name: EBI-2817289

Confidences:

Type
Value
No records found.

12
EBI-712921
 logo
dastyLogo
26 kDa cell surface protein TAPA-1
Target of the antiproliferative antibody 1
Tetraspanin-28

[+3]
CD81 antigen
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0498
-
identity


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0499
-
identity


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: CD81 antigen

Participant: CD81 antigen

Accession: EBI-8293818

Name: EBI-712921

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

P
Participant: CD81 antigen

Participant: CD81 antigen

Accession: EBI-8293818

Name: EBI-712921

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: CD81 antigen

Participant: CD81 antigen

Accession: EBI-8293818

Name: EBI-712921

Stoichiometry: 0.0

F
Participant: CD81 antigen

Participant: CD81 antigen

Accession: EBI-8293818

Name: EBI-712921

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: CD81 antigen

Participant: CD81 antigen

Accession: EBI-8293818

Name: EBI-712921

Confidences:

Type
Value
No records found.