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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 11805837

Journal: Nature (0028-0836)

Year of Publication: 2002

Title: Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.

Author List: Ho Y., Gruhler A., Heilbut A., Bader G.D., Moore L., Adams S.L., Millar A., Taylor P., Bennett K., Boutilier K., Yang L., Wolting C., Donaldson I., Schandorff S., Shewnarane J., Vo M., Taggart J., Goudreault M., Muskat B., Alfarano C., Dewar D., Lin Z., Michalickova K., Willems A.R., Sassi H., Nielsen P.A., Rasmussen K.J., Andersen J.R., Johansen L.E., Hansen L.H., Jespersen H., Podtelejnikov A., Nielsen E., Crawford J., Poulsen V., Sorensen B.D., Matthiesen J., Hendrickson R.C., Gleeson F., Pawson T., Moran M.F., Durocher D., Mann M., Hogue C.W., Figeys D., Tyers M.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Experiment (733 interactions)

Accession: EBI-13

Name: ho-2002-1

Host organism: Saccharomyces cerevisiae (Baker's yeast)

Organism: Saccharomyces cerevisiae (Baker's yeast)

Accession: EBI-140

Name: yeasx

Description: Saccharomyces cerevisiae (Baker's yeast)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
yeast

Interaction Detection Method: anti tag coip

Interaction detection method: anti tag coip
Accession: EBI-90

Name: anti tag coip

Description: anti tag coimmunoprecipitation

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0007
-
identity
pubmed
7708014
-
primary-reference


Annotations:
Topic
Text
definition
A specific antibody for the molecule of interest is not available, therefore the bait protein is expressed as a hybrid protein fused to a tag peptide/protein for which efficient and specific antibodies or a specific ligand are available.


Participant Identification Method: fingerprinting

Participant identification method: fingerprinting
Accession: EBI-70

Name: fingerprinting

Description: peptide massfingerprinting

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
11805826
-
see-also
psi-mi
MI:0082
-
identity
pubmed
11752590
-
primary-reference
pubmed
10967324
-
method reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by matching peptide masses, as measured by mass spectrometry, to the ones calculated from in silico fragmentation of a protein sequence database. A peptide mixture from a tryptic digest is analysed by MALDI-MS (Matrix-assisted laser desorption ionization mass spectrometry). The list of peptide masses obtained by MALDI MS is automatically compared to the calculated masses of the predicted peptide fragments for each entry in the database. High mass accuracy is very important in order to obtain a statistically significant and unambiguous match This method is best applied to completely sequenced genomes and well characterised proteomes. However, depending on the data quality, proteins that are highly homologous to already characterised proteins (greater than 80 to 90% sequence identity) can also be identified. The retrieved sequence are evaluated by mass accuracy of the peptides, matching of additional peptide masses in the MALDI spectrum after accounting for common modifications such as oxidation, acrylamidation of cysteine and missed cleavages and the use of secondary information (apparent isoelectric point and molecular weight). If any ambiguity about the identification by MALDI-MS still exists, the results must verified by an other identification method. Peptide mass fingerprint is generally carried out with a MALDI-TOF (Matrix-assisted laser desorption ionization time-of-flight ) instrument but can also be achieved ESI-TOF (Electrospray Ionisation time-of-flight) or LC-MS (Liquid Chromatography-Mass Spectrometry) mass spectrometer.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
Over expressed proteins used in this study

Interaction

Accession: EBI-47399

Name: ho-436

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Participants (30)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp12pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp12pp
1
EBI-1797
 logo
SRP1
KAP60
YNL189W

[+4]
Importin subunit alpha
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
No records found.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Importin subunit alpha

Participant: Importin subunit alpha

Accession: EBI-47400

Name: EBI-1797

P
Participant: Importin subunit alpha

Participant: Importin subunit alpha

Accession: EBI-47400

Name: EBI-1797

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Importin subunit alpha

Participant: Importin subunit alpha

Accession: EBI-47400

Name: EBI-1797

Stoichiometry: 0.0

F
Participant: Importin subunit alpha

Participant: Importin subunit alpha

Accession: EBI-47400

Name: EBI-1797

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
region
  • ?-?
  • A
    Feature: EBI-610435

    Feature: region

    Accession: EBI-610435

    Name: region


    C
    Participant: Importin subunit alpha

    Participant: Importin subunit alpha

    Accession: EBI-47400

    Name: EBI-1797

    Confidences:

    Type
    Value
    No records found.

    2
    EBI-33008
     logo
    YPR090W
    YPR089W
    Dilute domain-containing protein YPR089W
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Dilute domain-containing protein YPR089W

    Participant: Dilute domain-containing protein YPR089W

    Accession: EBI-1544263

    Name: EBI-33008

    P
    Participant: Dilute domain-containing protein YPR089W

    Participant: Dilute domain-containing protein YPR089W

    Accession: EBI-1544263

    Name: EBI-33008

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Dilute domain-containing protein YPR089W

    Participant: Dilute domain-containing protein YPR089W

    Accession: EBI-1544263

    Name: EBI-33008

    Stoichiometry: 0.0

    F
    Participant: Dilute domain-containing protein YPR089W

    Participant: Dilute domain-containing protein YPR089W

    Accession: EBI-1544263

    Name: EBI-33008

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Dilute domain-containing protein YPR089W

    Participant: Dilute domain-containing protein YPR089W

    Accession: EBI-1544263

    Name: EBI-33008

    Confidences:

    Type
    Value
    No records found.

    3
    EBI-1740
     logo
    DIS3
    Ribosomal RNA-processing protein 44
    Chromosome disjunction protein 3

    [+3]
    Exosome complex exonuclease DIS3
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Exosome complex exonuclease DIS3

    Participant: Exosome complex exonuclease DIS3

    Accession: EBI-47401

    Name: EBI-1740

    P
    Participant: Exosome complex exonuclease DIS3

    Participant: Exosome complex exonuclease DIS3

    Accession: EBI-47401

    Name: EBI-1740

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Exosome complex exonuclease DIS3

    Participant: Exosome complex exonuclease DIS3

    Accession: EBI-47401

    Name: EBI-1740

    Stoichiometry: 0.0

    F
    Participant: Exosome complex exonuclease DIS3

    Participant: Exosome complex exonuclease DIS3

    Accession: EBI-47401

    Name: EBI-1740

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Exosome complex exonuclease DIS3

    Participant: Exosome complex exonuclease DIS3

    Accession: EBI-47401

    Name: EBI-1740

    Confidences:

    Type
    Value
    No records found.

    4
    EBI-35018
     logo
    RTT103
    YDR289C
    Regulator of Ty1 transposition protein 103
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Regulator of Ty1 transposition protein 103

    Participant: Regulator of Ty1 transposition protein 103

    Accession: EBI-47402

    Name: EBI-35018

    P
    Participant: Regulator of Ty1 transposition protein 103

    Participant: Regulator of Ty1 transposition protein 103

    Accession: EBI-47402

    Name: EBI-35018

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Regulator of Ty1 transposition protein 103

    Participant: Regulator of Ty1 transposition protein 103

    Accession: EBI-47402

    Name: EBI-35018

    Stoichiometry: 0.0

    F
    Participant: Regulator of Ty1 transposition protein 103

    Participant: Regulator of Ty1 transposition protein 103

    Accession: EBI-47402

    Name: EBI-35018

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Regulator of Ty1 transposition protein 103

    Participant: Regulator of Ty1 transposition protein 103

    Accession: EBI-47402

    Name: EBI-35018

    Confidences:

    Type
    Value
    No records found.

    5
    EBI-17136
     logo
    SIF2
    EMB1
    YBR103W

    [+1]
    SIR4-interacting protein SIF2
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: SIR4-interacting protein SIF2

    Participant: SIR4-interacting protein SIF2

    Accession: EBI-47403

    Name: EBI-17136

    P
    Participant: SIR4-interacting protein SIF2

    Participant: SIR4-interacting protein SIF2

    Accession: EBI-47403

    Name: EBI-17136

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: SIR4-interacting protein SIF2

    Participant: SIR4-interacting protein SIF2

    Accession: EBI-47403

    Name: EBI-17136

    Stoichiometry: 0.0

    F
    Participant: SIR4-interacting protein SIF2

    Participant: SIR4-interacting protein SIF2

    Accession: EBI-47403

    Name: EBI-17136

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: SIR4-interacting protein SIF2

    Participant: SIR4-interacting protein SIF2

    Accession: EBI-47403

    Name: EBI-17136

    Confidences:

    Type
    Value
    No records found.

    6
    EBI-745
     logo
    STO1
    CBC1
    SUT1

    [+9]
    Nuclear cap-binding protein complex subunit 1
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Nuclear cap-binding protein complex subunit 1

    Participant: Nuclear cap-binding protein complex subunit 1

    Accession: EBI-47404

    Name: EBI-745

    P
    Participant: Nuclear cap-binding protein complex subunit 1

    Participant: Nuclear cap-binding protein complex subunit 1

    Accession: EBI-47404

    Name: EBI-745

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Nuclear cap-binding protein complex subunit 1

    Participant: Nuclear cap-binding protein complex subunit 1

    Accession: EBI-47404

    Name: EBI-745

    Stoichiometry: 0.0

    F
    Participant: Nuclear cap-binding protein complex subunit 1

    Participant: Nuclear cap-binding protein complex subunit 1

    Accession: EBI-47404

    Name: EBI-745

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Nuclear cap-binding protein complex subunit 1

    Participant: Nuclear cap-binding protein complex subunit 1

    Accession: EBI-47404

    Name: EBI-745

    Confidences:

    Type
    Value
    No records found.

    7
    EBI-627
     logo
    YDR240C
    SNU56
    MUD10
    56 kDa U1 small nuclear ribonucleoprotein component
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Accession: EBI-47405

    Name: EBI-627

    P
    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Accession: EBI-47405

    Name: EBI-627

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Accession: EBI-47405

    Name: EBI-627

    Stoichiometry: 0.0

    F
    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Accession: EBI-47405

    Name: EBI-627

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Participant: 56 kDa U1 small nuclear ribonucleoprotein component

    Accession: EBI-47405

    Name: EBI-627

    Confidences:

    Type
    Value
    No records found.

    8
    EBI-20731
     logo
    YAR002W
    NUP60
    FUN17

    [+1]
    Nucleoporin NUP60
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Nucleoporin NUP60

    Participant: Nucleoporin NUP60

    Accession: EBI-47406

    Name: EBI-20731

    P
    Participant: Nucleoporin NUP60

    Participant: Nucleoporin NUP60

    Accession: EBI-47406

    Name: EBI-20731

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Nucleoporin NUP60

    Participant: Nucleoporin NUP60

    Accession: EBI-47406

    Name: EBI-20731

    Stoichiometry: 0.0

    F
    Participant: Nucleoporin NUP60

    Participant: Nucleoporin NUP60

    Accession: EBI-47406

    Name: EBI-20731

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Nucleoporin NUP60

    Participant: Nucleoporin NUP60

    Accession: EBI-47406

    Name: EBI-20731

    Confidences:

    Type
    Value
    No records found.

    9
    EBI-12917
     logo
    YKR002W
    PAP1
    Polynucleotide adenylyltransferase
    Poly(A) polymerase
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Poly(A) polymerase

    Participant: Poly(A) polymerase

    Accession: EBI-47407

    Name: EBI-12917

    P
    Participant: Poly(A) polymerase

    Participant: Poly(A) polymerase

    Accession: EBI-47407

    Name: EBI-12917

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Poly(A) polymerase

    Participant: Poly(A) polymerase

    Accession: EBI-47407

    Name: EBI-12917

    Stoichiometry: 0.0

    F
    Participant: Poly(A) polymerase

    Participant: Poly(A) polymerase

    Accession: EBI-47407

    Name: EBI-12917

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Poly(A) polymerase

    Participant: Poly(A) polymerase

    Accession: EBI-47407

    Name: EBI-12917

    Confidences:

    Type
    Value
    No records found.

    10
    EBI-9145
     logo
    KAP95
    YLR347C
    L8300.15

    [+3]
    Importin subunit beta-1
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Importin subunit beta-1

    Participant: Importin subunit beta-1

    Accession: EBI-47408

    Name: EBI-9145

    P
    Participant: Importin subunit beta-1

    Participant: Importin subunit beta-1

    Accession: EBI-47408

    Name: EBI-9145

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Importin subunit beta-1

    Participant: Importin subunit beta-1

    Accession: EBI-47408

    Name: EBI-9145

    Stoichiometry: 0.0

    F
    Participant: Importin subunit beta-1

    Participant: Importin subunit beta-1

    Accession: EBI-47408

    Name: EBI-9145

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Importin subunit beta-1

    Participant: Importin subunit beta-1

    Accession: EBI-47408

    Name: EBI-9145

    Confidences:

    Type
    Value
    No records found.

    11
    EBI-12401
     logo
    NUP2
    YLR335W
    L8300.9

    [+2]
    Nucleoporin NUP2
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Nucleoporin NUP2

    Participant: Nucleoporin NUP2

    Accession: EBI-47409

    Name: EBI-12401

    P
    Participant: Nucleoporin NUP2

    Participant: Nucleoporin NUP2

    Accession: EBI-47409

    Name: EBI-12401

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Nucleoporin NUP2

    Participant: Nucleoporin NUP2

    Accession: EBI-47409

    Name: EBI-12401

    Stoichiometry: 0.0

    F
    Participant: Nucleoporin NUP2

    Participant: Nucleoporin NUP2

    Accession: EBI-47409

    Name: EBI-12401

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Nucleoporin NUP2

    Participant: Nucleoporin NUP2

    Accession: EBI-47409

    Name: EBI-12401

    Confidences:

    Type
    Value
    No records found.

    12
    EBI-32695
     logo
    NOP6
    D1018
    YDL213C
    Nucleolar protein 6
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Nucleolar protein 6

    Participant: Nucleolar protein 6

    Accession: EBI-47410

    Name: EBI-32695

    P
    Participant: Nucleolar protein 6

    Participant: Nucleolar protein 6

    Accession: EBI-47410

    Name: EBI-32695

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Nucleolar protein 6

    Participant: Nucleolar protein 6

    Accession: EBI-47410

    Name: EBI-32695

    Stoichiometry: 0.0

    F
    Participant: Nucleolar protein 6

    Participant: Nucleolar protein 6

    Accession: EBI-47410

    Name: EBI-32695

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Nucleolar protein 6

    Participant: Nucleolar protein 6

    Accession: EBI-47410

    Name: EBI-32695

    Confidences:

    Type
    Value
    No records found.

    13
    EBI-12392
     logo
    NUP1
    YOR098C
    YOR3182C

    [+1]
    Nucleoporin NUP1
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Nucleoporin NUP1

    Participant: Nucleoporin NUP1

    Accession: EBI-47412

    Name: EBI-12392

    P
    Participant: Nucleoporin NUP1

    Participant: Nucleoporin NUP1

    Accession: EBI-47412

    Name: EBI-12392

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Nucleoporin NUP1

    Participant: Nucleoporin NUP1

    Accession: EBI-47412

    Name: EBI-12392

    Stoichiometry: 0.0

    F
    Participant: Nucleoporin NUP1

    Participant: Nucleoporin NUP1

    Accession: EBI-47412

    Name: EBI-12392

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Nucleoporin NUP1

    Participant: Nucleoporin NUP1

    Accession: EBI-47412

    Name: EBI-12392

    Confidences:

    Type
    Value
    No records found.

    14
    EBI-10841
     logo
    YML062C
    MFT1
    Mitochondrial fusion target protein 1
    THO complex subunit MFT1
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: THO complex subunit MFT1

    Participant: THO complex subunit MFT1

    Accession: EBI-47413

    Name: EBI-10841

    P
    Participant: THO complex subunit MFT1

    Participant: THO complex subunit MFT1

    Accession: EBI-47413

    Name: EBI-10841

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: THO complex subunit MFT1

    Participant: THO complex subunit MFT1

    Accession: EBI-47413

    Name: EBI-10841

    Stoichiometry: 0.0

    F
    Participant: THO complex subunit MFT1

    Participant: THO complex subunit MFT1

    Accession: EBI-47413

    Name: EBI-10841

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: THO complex subunit MFT1

    Participant: THO complex subunit MFT1

    Accession: EBI-47413

    Name: EBI-10841

    Confidences:

    Type
    Value
    No records found.

    15
    EBI-17160
     logo
    YOL004W
    GAM2
    RPD1

    [+5]
    Transcriptional regulatory protein SIN3
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transcriptional regulatory protein SIN3

    Participant: Transcriptional regulatory protein SIN3

    Accession: EBI-47414

    Name: EBI-17160

    P
    Participant: Transcriptional regulatory protein SIN3

    Participant: Transcriptional regulatory protein SIN3

    Accession: EBI-47414

    Name: EBI-17160

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transcriptional regulatory protein SIN3

    Participant: Transcriptional regulatory protein SIN3

    Accession: EBI-47414

    Name: EBI-17160

    Stoichiometry: 0.0

    F
    Participant: Transcriptional regulatory protein SIN3

    Participant: Transcriptional regulatory protein SIN3

    Accession: EBI-47414

    Name: EBI-17160

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transcriptional regulatory protein SIN3

    Participant: Transcriptional regulatory protein SIN3

    Accession: EBI-47414

    Name: EBI-17160

    Confidences:

    Type
    Value
    No records found.

    16
    EBI-1782
     logo
    RRP6
    UNC733
    Ribosomal RNA-processing protein 6

    [+1]
    Exosome complex exonuclease RRP6
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Exosome complex exonuclease RRP6

    Participant: Exosome complex exonuclease RRP6

    Accession: EBI-47415

    Name: EBI-1782

    P
    Participant: Exosome complex exonuclease RRP6

    Participant: Exosome complex exonuclease RRP6

    Accession: EBI-47415

    Name: EBI-1782

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Exosome complex exonuclease RRP6

    Participant: Exosome complex exonuclease RRP6

    Accession: EBI-47415

    Name: EBI-1782

    Stoichiometry: 0.0

    F
    Participant: Exosome complex exonuclease RRP6

    Participant: Exosome complex exonuclease RRP6

    Accession: EBI-47415

    Name: EBI-1782

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Exosome complex exonuclease RRP6

    Participant: Exosome complex exonuclease RRP6

    Accession: EBI-47415

    Name: EBI-1782

    Confidences:

    Type
    Value
    No records found.

    17
    EBI-6940
     logo
    J1911
    YJR093C
    FIP1
    Pre-mRNA polyadenylation factor FIP1
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Pre-mRNA polyadenylation factor FIP1

    Participant: Pre-mRNA polyadenylation factor FIP1

    Accession: EBI-47416

    Name: EBI-6940

    P
    Participant: Pre-mRNA polyadenylation factor FIP1

    Participant: Pre-mRNA polyadenylation factor FIP1

    Accession: EBI-47416

    Name: EBI-6940

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Pre-mRNA polyadenylation factor FIP1

    Participant: Pre-mRNA polyadenylation factor FIP1

    Accession: EBI-47416

    Name: EBI-6940

    Stoichiometry: 0.0

    F
    Participant: Pre-mRNA polyadenylation factor FIP1

    Participant: Pre-mRNA polyadenylation factor FIP1

    Accession: EBI-47416

    Name: EBI-6940

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Pre-mRNA polyadenylation factor FIP1

    Participant: Pre-mRNA polyadenylation factor FIP1

    Accession: EBI-47416

    Name: EBI-6940

    Confidences:

    Type
    Value
    No records found.

    18
    EBI-1773
     logo
    RRP43
    YCR035C
    YCR35C

    [+2]
    Exosome complex component RRP43
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Exosome complex component RRP43

    Participant: Exosome complex component RRP43

    Accession: EBI-47417

    Name: EBI-1773

    P
    Participant: Exosome complex component RRP43

    Participant: Exosome complex component RRP43

    Accession: EBI-47417

    Name: EBI-1773

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Exosome complex component RRP43

    Participant: Exosome complex component RRP43

    Accession: EBI-47417

    Name: EBI-1773

    Stoichiometry: 0.0

    F
    Participant: Exosome complex component RRP43

    Participant: Exosome complex component RRP43

    Accession: EBI-47417

    Name: EBI-1773

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Exosome complex component RRP43

    Participant: Exosome complex component RRP43

    Accession: EBI-47417

    Name: EBI-1773

    Confidences:

    Type
    Value
    No records found.

    19
    EBI-11835
     logo
    NAM8
    MRE2
    YHR086W
    Protein NAM8
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Protein NAM8

    Participant: Protein NAM8

    Accession: EBI-47418

    Name: EBI-11835

    P
    Participant: Protein NAM8

    Participant: Protein NAM8

    Accession: EBI-47418

    Name: EBI-11835

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Protein NAM8

    Participant: Protein NAM8

    Accession: EBI-47418

    Name: EBI-11835

    Stoichiometry: 0.0

    F
    Participant: Protein NAM8

    Participant: Protein NAM8

    Accession: EBI-47418

    Name: EBI-11835

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Protein NAM8

    Participant: Protein NAM8

    Accession: EBI-47418

    Name: EBI-11835

    Confidences:

    Type
    Value
    No records found.

    20
    EBI-15673
     logo
    RNT1
    YMR239C
    YM9408.01C

    [+2]
    Ribonuclease 3
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Ribonuclease 3

    Participant: Ribonuclease 3

    Accession: EBI-47419

    Name: EBI-15673

    P
    Participant: Ribonuclease 3

    Participant: Ribonuclease 3

    Accession: EBI-47419

    Name: EBI-15673

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Ribonuclease 3

    Participant: Ribonuclease 3

    Accession: EBI-47419

    Name: EBI-15673

    Stoichiometry: 0.0

    F
    Participant: Ribonuclease 3

    Participant: Ribonuclease 3

    Accession: EBI-47419

    Name: EBI-15673

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Ribonuclease 3

    Participant: Ribonuclease 3

    Accession: EBI-47419

    Name: EBI-15673

    Confidences:

    Type
    Value
    No records found.


    Graphical Representation of Experimental Features