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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 23416715

Journal: J Proteomics (1874-3919)

Year of Publication: 2013

Title: The PI(3)P Interactome from a Colon Cancer Cell.

Author List: Catimel B., Kapp E., Yin M.X., Gregory M., Wong L.S., Condron M., Church N., Kershaw N., Holmes A.B., Burgess A.W.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
Apoptosis - Interactions involving proteins with a function related to apoptosis
Neurodegeneration - Publications depicting interactions involved in neurodegenerative diseases.
Huntington's - Publications describing interactions involved in Huntington's disease

Experiment (1 interaction)

Accession: EBI-4402301

Name: catimel-2013-2

Host organism: In vitro

Organism: In vitro

Accession: EBI-1318

Name: in vitro

Description: In vitro

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
�Host Organism' is in vitro on experiments when one of the interacting proteins is extracellular or has an extracellular domain that participates in the interaction and /or the interaction is shown to occur in a tube.
The term is also used to indicate in vitro produced protein e.g. by coupled in vitro transcription translation system.
1. Interaction between a cellsurface receptor and a labelled purified protein ligand; 2. Two cells each of which express cellsurface molecules and are demonstrated to interact; 3. One cell expressing two or more cellsurface molecules which are demonstrated to interact.

Interaction Detection Method: pull down

Interaction detection method: pull down
Accession: EBI-1223

Name: pull down

Description: pull down

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0096
-
identity


Annotations:
Topic
Text
definition
A specific affinity chromatography method where a molecule of interest (bait) is bound to a column, often via an affinity tag expressed as a protein fusion (GST, HIS tag and others) or chemically linked to the bait molecule . The molecule may be expressed or synthesised and purified first, often in an heterologous system, bound to the matrix at high concentration and then challenged with a solution or cellular extract containing the candidate partner molecules. Alternatively, a multi-molecular complex may be adsorbed to the resin and the retained binding molecules subsequently identified.


Participant Identification Method: sequence tag

Participant identification method: sequence tag
Accession: EBI-81

Name: sequence tag

Description: sequence tag identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
11805837
-
see-also
psi-mi
MI:0102
-
identity
pubmed
11752590
-
method reference
pubmed
10967324
-
primary-reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by combining mass measurement and short amino acid sequence information obtained by tandem mass spectrometry. This information is then used to automatically find the best match in a sequence database. A mixture of peptides derived from a protease digestion is analysed by nanoelectrospray LC-MS/MS (Liquid Chromatography Tandem Mass Spectrometer or nanoESI MS/MS) mass spectrometry. Electrospray mass spectrometry cannot be applied to dilute samples and is affected by high salt. As a consequence peptides, normally extracted from acrylamide gels by in situ proteolysis, are desalted and concentrated on a microcolumn followed by elution into a capillary used for nanoelectrospray tandem mass spectrometry. A first mass spectrum (Normal mass spectrum or Q1 mass spectrum) gives information about the masses of all the peptides. Peptides observed in the normal mass spectrum are isolated in turn and dissociated into fragments by collision with gas molecules within the mass spectrometer. Some of the fragments obtained from a peptide constitute a nested set, differing by one amino acid, and the mass difference between them allows assignment of a partial sequence. The masses of the fragments define the position of the partial sequence in the peptide. Together with the cleavage specificity of the protease used to cleave the protein, and mass information such sequence tag provides much higher search specificity to match the a database entry. The procedure is repeated with several peptides from the digest, resulting in multiple identifications of the same protein or identification of several proteins from the peptide mixture. Unknown proteins can easily be identified by using the high specificity of the peptide sequence tag for searches in most sequence databases including EST or genome databases.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
The amino phosphoinositide analog of PI(3)P conjugated to Affi-gel 10. Data analysed using a Linear ion trap mass spectrometer (LTQ XL)
Bruno.Catimel@ludwig.edu.au
imex curation
2011-09-13: Bruno Catimel, Ludwig Institute for Cancer Research, Royal Melbourne Hospital, Parkville, Victoria, 3052, Australia
Only protein-protein interactions
-

Interaction

Accession: EBI-4402441

Name: 1_phosphatidy-abi1-1

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
Supp. Table 1B

Participants (469)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp12345678910pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp12345678910pp
1
EBI-1257113
 logo
1-phosphatidyl-1D-myo-inositol 3-phosphates
Organism Details

Accession:

Name:

-
Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


small molecule
Interactor type: small molecule
Accession: EBI-619656

Name: small molecule

Description: small molecule

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0328
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule not part of or directly encoded by the genome, encompasses any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer, etc., identifiable as a separately distinguishable entity.


A
Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Accession: EBI-4402532

Name: EBI-1257113

P
Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Accession: EBI-4402532

Name: EBI-1257113

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Accession: EBI-4402532

Name: EBI-1257113

Stoichiometry: 0.0

F
Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Accession: EBI-4402532

Name: EBI-1257113

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Participant: 1-phosphatidyl-1D-myo-inositol 3-phosphates

Accession: EBI-4402532

Name: EBI-1257113

Confidences:

Type
Value
No records found.

2
EBI-4402464
 logo
dastyLogo
p17-Beckwith-Wiedemann region 1 C
PHLDA2
BWR1C

[+7]
Pleckstrin homology-like domain family A member 2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Pleckstrin homology-like domain family A member 2

Participant: Pleckstrin homology-like domain family A member 2

Accession: EBI-4402522

Name: EBI-4402464

P
Participant: Pleckstrin homology-like domain family A member 2

Participant: Pleckstrin homology-like domain family A member 2

Accession: EBI-4402522

Name: EBI-4402464

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Pleckstrin homology-like domain family A member 2

Participant: Pleckstrin homology-like domain family A member 2

Accession: EBI-4402522

Name: EBI-4402464

Stoichiometry: 0.0

F
Participant: Pleckstrin homology-like domain family A member 2

Participant: Pleckstrin homology-like domain family A member 2

Accession: EBI-4402522

Name: EBI-4402464

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Pleckstrin homology-like domain family A member 2

Participant: Pleckstrin homology-like domain family A member 2

Accession: EBI-4402522

Name: EBI-4402464

Confidences:

Type
Value
No records found.

3
EBI-3221827
 logo
dastyLogo
STX7
Syntaxin-7
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Syntaxin-7

Participant: Syntaxin-7

Accession: EBI-4402523

Name: EBI-3221827

P
Participant: Syntaxin-7

Participant: Syntaxin-7

Accession: EBI-4402523

Name: EBI-3221827

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Syntaxin-7

Participant: Syntaxin-7

Accession: EBI-4402523

Name: EBI-3221827

Stoichiometry: 0.0

F
Participant: Syntaxin-7

Participant: Syntaxin-7

Accession: EBI-4402523

Name: EBI-3221827

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Syntaxin-7

Participant: Syntaxin-7

Accession: EBI-4402523

Name: EBI-3221827

Confidences:

Type
Value
No records found.

4
EBI-740160
 logo
dastyLogo
VTA1
HSPC228
My012

[+4]
Vacuolar protein sorting-associated protein VTA1 homolog
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Accession: EBI-4402524

Name: EBI-740160

P
Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Accession: EBI-4402524

Name: EBI-740160

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Accession: EBI-4402524

Name: EBI-740160

Stoichiometry: 0.0

F
Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Accession: EBI-4402524

Name: EBI-740160

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Participant: Vacuolar protein sorting-associated protein VTA1 homolog

Accession: EBI-4402524

Name: EBI-740160

Confidences:

Type
Value
No records found.

5
EBI-993903
 logo
dastyLogo
Erbb2-interacting protein
Densin-180-like protein
ERBB2IP

[+3]
Protein LAP2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein LAP2

Participant: Protein LAP2

Accession: EBI-4402525

Name: EBI-993903

P
Participant: Protein LAP2

Participant: Protein LAP2

Accession: EBI-4402525

Name: EBI-993903

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein LAP2

Participant: Protein LAP2

Accession: EBI-4402525

Name: EBI-993903

Stoichiometry: 0.0

F
Participant: Protein LAP2

Participant: Protein LAP2

Accession: EBI-4402525

Name: EBI-993903

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein LAP2

Participant: Protein LAP2

Accession: EBI-4402525

Name: EBI-993903

Confidences:

Type
Value
No records found.

6
EBI-1049004
 logo
dastyLogo
Mitochondrial outer membrane protein 25
SYNJ2BP
OMP25
Synaptojanin-2-binding protein
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Synaptojanin-2-binding protein

Participant: Synaptojanin-2-binding protein

Accession: EBI-4402526

Name: EBI-1049004

P
Participant: Synaptojanin-2-binding protein

Participant: Synaptojanin-2-binding protein

Accession: EBI-4402526

Name: EBI-1049004

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Synaptojanin-2-binding protein

Participant: Synaptojanin-2-binding protein

Accession: EBI-4402526

Name: EBI-1049004

Stoichiometry: 0.0

F
Participant: Synaptojanin-2-binding protein

Participant: Synaptojanin-2-binding protein

Accession: EBI-4402526

Name: EBI-1049004

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Synaptojanin-2-binding protein

Participant: Synaptojanin-2-binding protein

Accession: EBI-4402526

Name: EBI-1049004

Confidences:

Type
Value
No records found.

7
EBI-1569256
 logo
dastyLogo
Autophagy-linked FYVE protein
WDFY3
KIAA0993
WD repeat and FYVE domain-containing protein 3
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: WD repeat and FYVE domain-containing protein 3

Participant: WD repeat and FYVE domain-containing protein 3

Accession: EBI-4402527

Name: EBI-1569256

P
Participant: WD repeat and FYVE domain-containing protein 3

Participant: WD repeat and FYVE domain-containing protein 3

Accession: EBI-4402527

Name: EBI-1569256

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: WD repeat and FYVE domain-containing protein 3

Participant: WD repeat and FYVE domain-containing protein 3

Accession: EBI-4402527

Name: EBI-1569256

Stoichiometry: 0.0

F
Participant: WD repeat and FYVE domain-containing protein 3

Participant: WD repeat and FYVE domain-containing protein 3

Accession: EBI-4402527

Name: EBI-1569256

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: WD repeat and FYVE domain-containing protein 3

Participant: WD repeat and FYVE domain-containing protein 3

Accession: EBI-4402527

Name: EBI-1569256

Confidences:

Type
Value
No records found.

8
EBI-1042602
 logo
dastyLogo
TJP2
X104
Zonula occludens protein 2

[+3]
Tight junction protein ZO-2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Tight junction protein ZO-2

Participant: Tight junction protein ZO-2

Accession: EBI-4402528

Name: EBI-1042602

P
Participant: Tight junction protein ZO-2

Participant: Tight junction protein ZO-2

Accession: EBI-4402528

Name: EBI-1042602

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Tight junction protein ZO-2

Participant: Tight junction protein ZO-2

Accession: EBI-4402528

Name: EBI-1042602

Stoichiometry: 0.0

F
Participant: Tight junction protein ZO-2

Participant: Tight junction protein ZO-2

Accession: EBI-4402528

Name: EBI-1042602

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Tight junction protein ZO-2

Participant: Tight junction protein ZO-2

Accession: EBI-4402528

Name: EBI-1042602

Confidences:

Type
Value
No records found.

9
EBI-346882
 logo
dastyLogo
TSG101
ESCRT-I complex subunit TSG101
Tumor susceptibility gene 101 protein
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Tumor susceptibility gene 101 protein

Participant: Tumor susceptibility gene 101 protein

Accession: EBI-4402529

Name: EBI-346882

P
Participant: Tumor susceptibility gene 101 protein

Participant: Tumor susceptibility gene 101 protein

Accession: EBI-4402529

Name: EBI-346882

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Tumor susceptibility gene 101 protein

Participant: Tumor susceptibility gene 101 protein

Accession: EBI-4402529

Name: EBI-346882

Stoichiometry: 0.0

F
Participant: Tumor susceptibility gene 101 protein

Participant: Tumor susceptibility gene 101 protein

Accession: EBI-4402529

Name: EBI-346882

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Tumor susceptibility gene 101 protein

Participant: Tumor susceptibility gene 101 protein

Accession: EBI-4402529

Name: EBI-346882

Confidences:

Type
Value
No records found.

10
EBI-742503
 logo
dastyLogo
PACSIN2
Syndapin-II
Syndapin-2
Protein kinase C and casein kinase substrate in neurons protein 2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Accession: EBI-4402530

Name: EBI-742503

P
Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Accession: EBI-4402530

Name: EBI-742503

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Accession: EBI-4402530

Name: EBI-742503

Stoichiometry: 0.0

F
Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Accession: EBI-4402530

Name: EBI-742503

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Participant: Protein kinase C and casein kinase substrate in neurons protein 2

Accession: EBI-4402530

Name: EBI-742503

Confidences:

Type
Value
No records found.

11
EBI-711759
 logo
dastyLogo
ADP-ribosylation factor-related protein 2
ARL15
ARFRP2
ADP-ribosylation factor-like protein 15
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: ADP-ribosylation factor-like protein 15

Participant: ADP-ribosylation factor-like protein 15

Accession: EBI-4402531

Name: EBI-711759

P
Participant: ADP-ribosylation factor-like protein 15

Participant: ADP-ribosylation factor-like protein 15

Accession: EBI-4402531

Name: EBI-711759

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: ADP-ribosylation factor-like protein 15

Participant: ADP-ribosylation factor-like protein 15

Accession: EBI-4402531

Name: EBI-711759

Stoichiometry: 0.0

F
Participant: ADP-ribosylation factor-like protein 15

Participant: ADP-ribosylation factor-like protein 15

Accession: EBI-4402531

Name: EBI-711759

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: ADP-ribosylation factor-like protein 15

Participant: ADP-ribosylation factor-like protein 15

Accession: EBI-4402531

Name: EBI-711759

Confidences:

Type
Value
No records found.

12
EBI-876651
 logo
dastyLogo
Rho-associated, coiled-coil-containing protein kinase 1
p160 ROCK-1
Renal carcinoma antigen NY-REN-35

[+2]
Rho-associated protein kinase 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Rho-associated protein kinase 1

Participant: Rho-associated protein kinase 1

Accession: EBI-4402533

Name: EBI-876651

P
Participant: Rho-associated protein kinase 1

Participant: Rho-associated protein kinase 1

Accession: EBI-4402533

Name: EBI-876651

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Rho-associated protein kinase 1

Participant: Rho-associated protein kinase 1

Accession: EBI-4402533

Name: EBI-876651

Stoichiometry: 0.0

F
Participant: Rho-associated protein kinase 1

Participant: Rho-associated protein kinase 1

Accession: EBI-4402533

Name: EBI-876651

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Rho-associated protein kinase 1

Participant: Rho-associated protein kinase 1

Accession: EBI-4402533

Name: EBI-876651

Confidences:

Type
Value
No records found.

13
EBI-465400
 logo
dastyLogo
ARHGEF1
115 kDa guanine nucleotide exchange factor
Sub1.5
Rho guanine nucleotide exchange factor 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Rho guanine nucleotide exchange factor 1

Participant: Rho guanine nucleotide exchange factor 1

Accession: EBI-4402534

Name: EBI-465400

P
Participant: Rho guanine nucleotide exchange factor 1

Participant: Rho guanine nucleotide exchange factor 1

Accession: EBI-4402534

Name: EBI-465400

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Rho guanine nucleotide exchange factor 1

Participant: Rho guanine nucleotide exchange factor 1

Accession: EBI-4402534

Name: EBI-465400

Stoichiometry: 0.0

F
Participant: Rho guanine nucleotide exchange factor 1

Participant: Rho guanine nucleotide exchange factor 1

Accession: EBI-4402534

Name: EBI-465400

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Rho guanine nucleotide exchange factor 1

Participant: Rho guanine nucleotide exchange factor 1

Accession: EBI-4402534

Name: EBI-465400

Confidences:

Type
Value
No records found.

14
EBI-2563783
 logo
dastyLogo
Strumpellin and WASH-interacting protein
KIAA1033
WASH complex subunit 7
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: WASH complex subunit 7

Participant: WASH complex subunit 7

Accession: EBI-4402535

Name: EBI-2563783

P
Participant: WASH complex subunit 7

Participant: WASH complex subunit 7

Accession: EBI-4402535

Name: EBI-2563783

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: WASH complex subunit 7

Participant: WASH complex subunit 7

Accession: EBI-4402535

Name: EBI-2563783

Stoichiometry: 0.0

F
Participant: WASH complex subunit 7

Participant: WASH complex subunit 7

Accession: EBI-4402535

Name: EBI-2563783

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: WASH complex subunit 7

Participant: WASH complex subunit 7

Accession: EBI-4402535

Name: EBI-2563783

Confidences:

Type
Value
No records found.

15
EBI-718439
 logo
dastyLogo
Zinc finger protein MCG4
ZFPL1
Zinc finger protein-like 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Zinc finger protein-like 1

Participant: Zinc finger protein-like 1

Accession: EBI-4402536

Name: EBI-718439

P
Participant: Zinc finger protein-like 1

Participant: Zinc finger protein-like 1

Accession: EBI-4402536

Name: EBI-718439

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Zinc finger protein-like 1

Participant: Zinc finger protein-like 1

Accession: EBI-4402536

Name: EBI-718439

Stoichiometry: 0.0

F
Participant: Zinc finger protein-like 1

Participant: Zinc finger protein-like 1

Accession: EBI-4402536

Name: EBI-718439

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Zinc finger protein-like 1

Participant: Zinc finger protein-like 1

Accession: EBI-4402536

Name: EBI-718439

Confidences:

Type
Value
No records found.

16
EBI-721179
 logo
dastyLogo
ATP6V0C
ATP6C
ATP6L

[+2]
V-type proton ATPase 16 kDa proteolipid subunit
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: V-type proton ATPase 16 kDa proteolipid subunit

Participant: V-type proton ATPase 16 kDa proteolipid subunit

Accession: EBI-4402537

Name: EBI-721179

P
Participant: V-type proton ATPase 16 kDa proteolipid subunit

Participant: V-type proton ATPase 16 kDa proteolipid subunit

Accession: EBI-4402537

Name: EBI-721179

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: V-type proton ATPase 16 kDa proteolipid subunit

Participant: V-type proton ATPase 16 kDa proteolipid subunit

Accession: EBI-4402537

Name: EBI-721179

Stoichiometry: 0.0

F
Participant: V-type proton ATPase 16 kDa proteolipid subunit

Participant: V-type proton ATPase 16 kDa proteolipid subunit

Accession: EBI-4402537

Name: EBI-721179

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: V-type proton ATPase 16 kDa proteolipid subunit

Participant: V-type proton ATPase 16 kDa proteolipid subunit

Accession: EBI-4402537

Name: EBI-721179

Confidences:

Type
Value
No records found.

17
EBI-4401517
 logo
dastyLogo
GOSR2
GS27
27 kDa Golgi SNARE protein

[+1]
Golgi SNAP receptor complex member 2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Golgi SNAP receptor complex member 2

Participant: Golgi SNAP receptor complex member 2

Accession: EBI-4402538

Name: EBI-4401517

P
Participant: Golgi SNAP receptor complex member 2

Participant: Golgi SNAP receptor complex member 2

Accession: EBI-4402538

Name: EBI-4401517

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Golgi SNAP receptor complex member 2

Participant: Golgi SNAP receptor complex member 2

Accession: EBI-4402538

Name: EBI-4401517

Stoichiometry: 0.0

F
Participant: Golgi SNAP receptor complex member 2

Participant: Golgi SNAP receptor complex member 2

Accession: EBI-4402538

Name: EBI-4401517

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Golgi SNAP receptor complex member 2

Participant: Golgi SNAP receptor complex member 2

Accession: EBI-4402538

Name: EBI-4401517

Confidences:

Type
Value
No records found.

18
EBI-4402330
 logo
dastyLogo
SFT2D2
SFT2 domain-containing protein 2
UNQ512/PRO1027
Vesicle transport protein SFT2B
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Vesicle transport protein SFT2B

Participant: Vesicle transport protein SFT2B

Accession: EBI-4402539

Name: EBI-4402330

P
Participant: Vesicle transport protein SFT2B

Participant: Vesicle transport protein SFT2B

Accession: EBI-4402539

Name: EBI-4402330

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Vesicle transport protein SFT2B

Participant: Vesicle transport protein SFT2B

Accession: EBI-4402539

Name: EBI-4402330

Stoichiometry: 0.0

F
Participant: Vesicle transport protein SFT2B

Participant: Vesicle transport protein SFT2B

Accession: EBI-4402539

Name: EBI-4402330

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Vesicle transport protein SFT2B

Participant: Vesicle transport protein SFT2B

Accession: EBI-4402539

Name: EBI-4402330

Confidences:

Type
Value
No records found.

19
EBI-79464
 logo
dastyLogo
PIK3R1
GRB1
Phosphatidylinositol 3-kinase 85 kDa regulatory subunit alpha
Phosphatidylinositol 3-kinase regulatory subunit alpha
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Accession: EBI-4402540

Name: EBI-79464

P
Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Accession: EBI-4402540

Name: EBI-79464

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Accession: EBI-4402540

Name: EBI-79464

Stoichiometry: 0.0

F
Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Accession: EBI-4402540

Name: EBI-79464

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Participant: Phosphatidylinositol 3-kinase regulatory subunit alpha

Accession: EBI-4402540

Name: EBI-79464

Confidences:

Type
Value
No records found.

20
EBI-741261
 logo
dastyLogo
Adapter protein containing PH domain, PTB domain and leucine zipper motif 2
APPL2
DIP13B
DCC-interacting protein 13-beta
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession: EBI-4289532

Name: human-lim1215

Description: -

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: DCC-interacting protein 13-beta

Participant: DCC-interacting protein 13-beta

Accession: EBI-4402541

Name: EBI-741261

P
Participant: DCC-interacting protein 13-beta

Participant: DCC-interacting protein 13-beta

Accession: EBI-4402541

Name: EBI-741261

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: DCC-interacting protein 13-beta

Participant: DCC-interacting protein 13-beta

Accession: EBI-4402541

Name: EBI-741261

Stoichiometry: 0.0

F
Participant: DCC-interacting protein 13-beta

Participant: DCC-interacting protein 13-beta

Accession: EBI-4402541

Name: EBI-741261

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: DCC-interacting protein 13-beta

Participant: DCC-interacting protein 13-beta

Accession: EBI-4402541

Name: EBI-741261

Confidences:

Type
Value
No records found.