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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 15506919

Journal: Biochem. Soc. Trans. (0300-5127)

Year of Publication: 2004

Title: Proteomic analysis of chromatin-modifying complexes in Saccharomyces cerevisiae identifies novel subunits.

Author List: Lee KK., Prochasson P., Florens L., Swanson SK., Washburn MP., Workman JL.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
Chromatin - Epigenetic interactions resulting in chromatin modulation

Experiment (4 interactions)

Accession: EBI-1189699

Name: lee-2004g-2

Host organism: Saccharomyces cerevisiae (Baker's yeast)

Organism: Saccharomyces cerevisiae (Baker's yeast)

Accession: EBI-140

Name: yeasx

Description: Saccharomyces cerevisiae (Baker's yeast)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
yeast
-

Interaction Detection Method: affinity chrom

Interaction detection method: affinity chrom
Accession: EBI-86

Name: affinity chrom

Description: affinity chromatography technology

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0004
-
identity
pubmed
7708014
-
primary-reference


Annotations:
Topic
Text
definition
This class of approaches is characterised by the use of affinity resins as tools to purify molecule of interest (baits) and their binding partners. The baits can be captured by a variety of high affinity ligands linked to a resin - for example, antibodies specific for the bait itself, antibodies for specific tags engineered to be expressed as part of the bait or other high affinity binders such as glutathione resins for GST fusion proteins, metal resins for histidine-tagged proteins.


Participant Identification Method: mudpit

Participant identification method: mudpit
Accession: EBI-933988

Name: mudpit

Description: multidimensional protein identification technology

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0658
-
identity
pubmed
11231557
-
primary-reference


Annotations:
Topic
Text
definition
MudPIT is a method for rapid and large-scale protein identification by multidimensional liquid chromatography associated with tandem mass spectrometry. The chromatography step consists of strong cation exchange material back-to-back with reversed phase material inside fused silica capillaries. The peptides bound to the cation-exchange resin are freed by the gradually increasing salt concentration of the buffer and are subsequently retained by the reversed phase resin. Increasing buffers hydrophobicity progressively elute peptides from the reversed phase packing directly into the mass spectrometer. Typically this mass spectrometer will be a tandem electrospray, so peptides undergo ionization in the liquid phase, are separated in a primary mass spectrometer, analysed in the second mass spectrometer and identified.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
JLW@stowers-institute.org
Immuno-affinity purification was carried out using IgG-sepharose.

Interaction

Accession: EBI-1189559

Name: ada1-ada2-1

Description: SLIK complex.

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
SLIK (SAGA-like) complex

Annotations:

Topic
Text
1 and 2
Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.

Participants (17)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
1
EBI-17921
 logo
dastyLogo
SPT3
YDR392W
D9509.12

[+1]
Protein SPT3
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein SPT3

Participant: Protein SPT3

Accession: EBI-1189561

Name: EBI-17921

P
Participant: Protein SPT3

Participant: Protein SPT3

Accession: EBI-1189561

Name: EBI-17921

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein SPT3

Participant: Protein SPT3

Accession: EBI-1189561

Name: EBI-17921

Stoichiometry: 0.0

F
Participant: Protein SPT3

Participant: Protein SPT3

Accession: EBI-1189561

Name: EBI-17921

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein SPT3

Participant: Protein SPT3

Accession: EBI-1189561

Name: EBI-17921

Confidences:

Type
Value
No records found.

2
EBI-19863
 logo
dastyLogo
UBP8
YMR223W
YM9959.05

[+3]
Ubiquitin carboxyl-terminal hydrolase 8
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Ubiquitin carboxyl-terminal hydrolase 8

Participant: Ubiquitin carboxyl-terminal hydrolase 8

Accession: EBI-1189562

Name: EBI-19863

P
Participant: Ubiquitin carboxyl-terminal hydrolase 8

Participant: Ubiquitin carboxyl-terminal hydrolase 8

Accession: EBI-1189562

Name: EBI-19863

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Ubiquitin carboxyl-terminal hydrolase 8

Participant: Ubiquitin carboxyl-terminal hydrolase 8

Accession: EBI-1189562

Name: EBI-19863

Stoichiometry: 0.0

F
Participant: Ubiquitin carboxyl-terminal hydrolase 8

Participant: Ubiquitin carboxyl-terminal hydrolase 8

Accession: EBI-1189562

Name: EBI-19863

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Ubiquitin carboxyl-terminal hydrolase 8

Participant: Ubiquitin carboxyl-terminal hydrolase 8

Accession: EBI-1189562

Name: EBI-19863

Confidences:

Type
Value
No records found.

3
EBI-23812
 logo
dastyLogo
YGL066W
SGF73
73 kDa SAGA-associated factor

[+1]
SAGA-associated factor 73
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: SAGA-associated factor 73

Participant: SAGA-associated factor 73

Accession: EBI-1189563

Name: EBI-23812

P
Participant: SAGA-associated factor 73

Participant: SAGA-associated factor 73

Accession: EBI-1189563

Name: EBI-23812

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: SAGA-associated factor 73

Participant: SAGA-associated factor 73

Accession: EBI-1189563

Name: EBI-23812

Stoichiometry: 0.0

F
Participant: SAGA-associated factor 73

Participant: SAGA-associated factor 73

Accession: EBI-1189563

Name: EBI-23812

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: SAGA-associated factor 73

Participant: SAGA-associated factor 73

Accession: EBI-1189563

Name: EBI-23812

Confidences:

Type
Value
No records found.

4
EBI-34550
 logo
dastyLogo
SGF11
11 kDa SAGA-associated factor
YPL047W
SAGA-associated factor 11
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: SAGA-associated factor 11

Participant: SAGA-associated factor 11

Accession: EBI-1189564

Name: EBI-34550

P
Participant: SAGA-associated factor 11

Participant: SAGA-associated factor 11

Accession: EBI-1189564

Name: EBI-34550

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: SAGA-associated factor 11

Participant: SAGA-associated factor 11

Accession: EBI-1189564

Name: EBI-34550

Stoichiometry: 0.0

F
Participant: SAGA-associated factor 11

Participant: SAGA-associated factor 11

Accession: EBI-1189564

Name: EBI-34550

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: SAGA-associated factor 11

Participant: SAGA-associated factor 11

Accession: EBI-1189564

Name: EBI-34550

Confidences:

Type
Value
No records found.

5
EBI-35097
 logo
dastyLogo
TAF12
TAF61
TAF68

[+6]
Transcription initiation factor TFIID subunit 12
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transcription initiation factor TFIID subunit 12

Participant: Transcription initiation factor TFIID subunit 12

Accession: EBI-1189565

Name: EBI-35097

P
Participant: Transcription initiation factor TFIID subunit 12

Participant: Transcription initiation factor TFIID subunit 12

Accession: EBI-1189565

Name: EBI-35097

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transcription initiation factor TFIID subunit 12

Participant: Transcription initiation factor TFIID subunit 12

Accession: EBI-1189565

Name: EBI-35097

Stoichiometry: 0.0

F
Participant: Transcription initiation factor TFIID subunit 12

Participant: Transcription initiation factor TFIID subunit 12

Accession: EBI-1189565

Name: EBI-35097

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Transcription initiation factor TFIID subunit 12

Participant: Transcription initiation factor TFIID subunit 12

Accession: EBI-1189565

Name: EBI-35097

Confidences:

Type
Value
No records found.

6
EBI-7458
 logo
dastyLogo
YGR252W
GCN5
ADA4

[+1]
Histone acetyltransferase GCN5
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone acetyltransferase GCN5

Participant: Histone acetyltransferase GCN5

Accession: EBI-1189566

Name: EBI-7458

P
Participant: Histone acetyltransferase GCN5

Participant: Histone acetyltransferase GCN5

Accession: EBI-1189566

Name: EBI-7458

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone acetyltransferase GCN5

Participant: Histone acetyltransferase GCN5

Accession: EBI-1189566

Name: EBI-7458

Stoichiometry: 0.0

F
Participant: Histone acetyltransferase GCN5

Participant: Histone acetyltransferase GCN5

Accession: EBI-1189566

Name: EBI-7458

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone acetyltransferase GCN5

Participant: Histone acetyltransferase GCN5

Accession: EBI-1189566

Name: EBI-7458

Confidences:

Type
Value
No records found.

7
EBI-24638
 logo
dastyLogo
TRA1
p400 kDa component of SAGA
YHR099W
Transcription-associated protein 1
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transcription-associated protein 1

Participant: Transcription-associated protein 1

Accession: EBI-1189567

Name: EBI-24638

P
Participant: Transcription-associated protein 1

Participant: Transcription-associated protein 1

Accession: EBI-1189567

Name: EBI-24638

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transcription-associated protein 1

Participant: Transcription-associated protein 1

Accession: EBI-1189567

Name: EBI-24638

Stoichiometry: 0.0

F
Participant: Transcription-associated protein 1

Participant: Transcription-associated protein 1

Accession: EBI-1189567

Name: EBI-24638

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Transcription-associated protein 1

Participant: Transcription-associated protein 1

Accession: EBI-1189567

Name: EBI-24638

Confidences:

Type
Value
No records found.

8
EBI-17751
 logo
dastyLogo
SPT20
ADA5
YOL148C
Transcription factor SPT20
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transcription factor SPT20

Participant: Transcription factor SPT20

Accession: EBI-1189568

Name: EBI-17751

P
Participant: Transcription factor SPT20

Participant: Transcription factor SPT20

Accession: EBI-1189568

Name: EBI-17751

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transcription factor SPT20

Participant: Transcription factor SPT20

Accession: EBI-1189568

Name: EBI-17751

Stoichiometry: 0.0

F
Participant: Transcription factor SPT20

Participant: Transcription factor SPT20

Accession: EBI-1189568

Name: EBI-17751

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Transcription factor SPT20

Participant: Transcription factor SPT20

Accession: EBI-1189568

Name: EBI-17751

Confidences:

Type
Value
No records found.

9
EBI-2192
 logo
dastyLogo
NGG1
ADA3
YDR176W

[+3]
Chromatin-remodeling complexes subunit NGG1
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Chromatin-remodeling complexes subunit NGG1

Participant: Chromatin-remodeling complexes subunit NGG1

Accession: EBI-1189569

Name: EBI-2192

P
Participant: Chromatin-remodeling complexes subunit NGG1

Participant: Chromatin-remodeling complexes subunit NGG1

Accession: EBI-1189569

Name: EBI-2192

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Chromatin-remodeling complexes subunit NGG1

Participant: Chromatin-remodeling complexes subunit NGG1

Accession: EBI-1189569

Name: EBI-2192

Stoichiometry: 0.0

F
Participant: Chromatin-remodeling complexes subunit NGG1

Participant: Chromatin-remodeling complexes subunit NGG1

Accession: EBI-1189569

Name: EBI-2192

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Chromatin-remodeling complexes subunit NGG1

Participant: Chromatin-remodeling complexes subunit NGG1

Accession: EBI-1189569

Name: EBI-2192

Confidences:

Type
Value
No records found.

10
EBI-18876
 logo
dastyLogo
TAF6
TAF60
YGL112C

[+3]
Transcription initiation factor TFIID subunit 6
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transcription initiation factor TFIID subunit 6

Participant: Transcription initiation factor TFIID subunit 6

Accession: EBI-1189570

Name: EBI-18876

P
Participant: Transcription initiation factor TFIID subunit 6

Participant: Transcription initiation factor TFIID subunit 6

Accession: EBI-1189570

Name: EBI-18876

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transcription initiation factor TFIID subunit 6

Participant: Transcription initiation factor TFIID subunit 6

Accession: EBI-1189570

Name: EBI-18876

Stoichiometry: 0.0

F
Participant: Transcription initiation factor TFIID subunit 6

Participant: Transcription initiation factor TFIID subunit 6

Accession: EBI-1189570

Name: EBI-18876

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Transcription initiation factor TFIID subunit 6

Participant: Transcription initiation factor TFIID subunit 6

Accession: EBI-1189570

Name: EBI-18876

Confidences:

Type
Value
No records found.

11
EBI-2186
 logo
dastyLogo
ADA2
D9461.33
YDR448W
Transcriptional adapter 2
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
neutral component
Experimental role: neutral component
Accession: EBI-55

Name: neutral component

Description: neutral component

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0497
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule role in an experimental setting that does not have an embedded asymmetry.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transcriptional adapter 2

Participant: Transcriptional adapter 2

Accession: EBI-1189571

Name: EBI-2186

P
Participant: Transcriptional adapter 2

Participant: Transcriptional adapter 2

Accession: EBI-1189571

Name: EBI-2186

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transcriptional adapter 2

Participant: Transcriptional adapter 2

Accession: EBI-1189571

Name: EBI-2186

Stoichiometry: 0.0

F
Participant: Transcriptional adapter 2

Participant: Transcriptional adapter 2

Accession: EBI-1189571

Name: EBI-2186

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
region
  • ?-?
  • A
    Feature: EBI-1189579

    Feature: region

    Accession: EBI-1189579

    Name: region


    C
    Participant: Transcriptional adapter 2

    Participant: Transcriptional adapter 2

    Accession: EBI-1189571

    Name: EBI-2186

    Confidences:

    Type
    Value
    No records found.

    12
    EBI-27500
     logo
    dastyLogo
    TAF9
    TAF17
    YMR236W

    [+5]
    Transcription initiation factor TFIID subunit 9
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    neutral component
    Experimental role: neutral component
    Accession: EBI-55

    Name: neutral component

    Description: neutral component

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0497
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule role in an experimental setting that does not have an embedded asymmetry.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transcription initiation factor TFIID subunit 9

    Participant: Transcription initiation factor TFIID subunit 9

    Accession: EBI-1189572

    Name: EBI-27500

    P
    Participant: Transcription initiation factor TFIID subunit 9

    Participant: Transcription initiation factor TFIID subunit 9

    Accession: EBI-1189572

    Name: EBI-27500

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transcription initiation factor TFIID subunit 9

    Participant: Transcription initiation factor TFIID subunit 9

    Accession: EBI-1189572

    Name: EBI-27500

    Stoichiometry: 0.0

    F
    Participant: Transcription initiation factor TFIID subunit 9

    Participant: Transcription initiation factor TFIID subunit 9

    Accession: EBI-1189572

    Name: EBI-27500

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transcription initiation factor TFIID subunit 9

    Participant: Transcription initiation factor TFIID subunit 9

    Accession: EBI-1189572

    Name: EBI-27500

    Confidences:

    Type
    Value
    No records found.

    13
    EBI-18868
     logo
    dastyLogo
    TAF5
    TAF90
    YBR198C

    [+4]
    Transcription initiation factor TFIID subunit 5
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    neutral component
    Experimental role: neutral component
    Accession: EBI-55

    Name: neutral component

    Description: neutral component

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0497
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule role in an experimental setting that does not have an embedded asymmetry.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transcription initiation factor TFIID subunit 5

    Participant: Transcription initiation factor TFIID subunit 5

    Accession: EBI-1189573

    Name: EBI-18868

    P
    Participant: Transcription initiation factor TFIID subunit 5

    Participant: Transcription initiation factor TFIID subunit 5

    Accession: EBI-1189573

    Name: EBI-18868

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transcription initiation factor TFIID subunit 5

    Participant: Transcription initiation factor TFIID subunit 5

    Accession: EBI-1189573

    Name: EBI-18868

    Stoichiometry: 0.0

    F
    Participant: Transcription initiation factor TFIID subunit 5

    Participant: Transcription initiation factor TFIID subunit 5

    Accession: EBI-1189573

    Name: EBI-18868

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transcription initiation factor TFIID subunit 5

    Participant: Transcription initiation factor TFIID subunit 5

    Accession: EBI-1189573

    Name: EBI-18868

    Confidences:

    Type
    Value
    No records found.

    14
    EBI-21678
     logo
    dastyLogo
    YCL010C
    YCL10C
    SGF29

    [+2]
    SAGA-associated factor 29
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    neutral component
    Experimental role: neutral component
    Accession: EBI-55

    Name: neutral component

    Description: neutral component

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0497
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule role in an experimental setting that does not have an embedded asymmetry.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: SAGA-associated factor 29

    Participant: SAGA-associated factor 29

    Accession: EBI-1189575

    Name: EBI-21678

    P
    Participant: SAGA-associated factor 29

    Participant: SAGA-associated factor 29

    Accession: EBI-1189575

    Name: EBI-21678

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: SAGA-associated factor 29

    Participant: SAGA-associated factor 29

    Accession: EBI-1189575

    Name: EBI-21678

    Stoichiometry: 0.0

    F
    Participant: SAGA-associated factor 29

    Participant: SAGA-associated factor 29

    Accession: EBI-1189575

    Name: EBI-21678

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: SAGA-associated factor 29

    Participant: SAGA-associated factor 29

    Accession: EBI-1189575

    Name: EBI-21678

    Confidences:

    Type
    Value
    No records found.

    15
    EBI-8287
     logo
    dastyLogo
    YPL254W
    HFI1
    ADA1

    [+1]
    Transcriptional coactivator HFI1/ADA1
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    neutral component
    Experimental role: neutral component
    Accession: EBI-55

    Name: neutral component

    Description: neutral component

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0497
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule role in an experimental setting that does not have an embedded asymmetry.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transcriptional coactivator HFI1/ADA1

    Participant: Transcriptional coactivator HFI1/ADA1

    Accession: EBI-1189576

    Name: EBI-8287

    P
    Participant: Transcriptional coactivator HFI1/ADA1

    Participant: Transcriptional coactivator HFI1/ADA1

    Accession: EBI-1189576

    Name: EBI-8287

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transcriptional coactivator HFI1/ADA1

    Participant: Transcriptional coactivator HFI1/ADA1

    Accession: EBI-1189576

    Name: EBI-8287

    Stoichiometry: 0.0

    F
    Participant: Transcriptional coactivator HFI1/ADA1

    Participant: Transcriptional coactivator HFI1/ADA1

    Accession: EBI-1189576

    Name: EBI-8287

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transcriptional coactivator HFI1/ADA1

    Participant: Transcriptional coactivator HFI1/ADA1

    Accession: EBI-1189576

    Name: EBI-8287

    Confidences:

    Type
    Value
    No records found.

    16
    EBI-18889
     logo
    dastyLogo
    TAF25
    TAFII-23
    TAFII-25

    [+7]
    Transcription initiation factor TFIID subunit 10
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    neutral component
    Experimental role: neutral component
    Accession: EBI-55

    Name: neutral component

    Description: neutral component

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0497
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule role in an experimental setting that does not have an embedded asymmetry.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transcription initiation factor TFIID subunit 10

    Participant: Transcription initiation factor TFIID subunit 10

    Accession: EBI-1189577

    Name: EBI-18889

    P
    Participant: Transcription initiation factor TFIID subunit 10

    Participant: Transcription initiation factor TFIID subunit 10

    Accession: EBI-1189577

    Name: EBI-18889

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transcription initiation factor TFIID subunit 10

    Participant: Transcription initiation factor TFIID subunit 10

    Accession: EBI-1189577

    Name: EBI-18889

    Stoichiometry: 0.0

    F
    Participant: Transcription initiation factor TFIID subunit 10

    Participant: Transcription initiation factor TFIID subunit 10

    Accession: EBI-1189577

    Name: EBI-18889

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transcription initiation factor TFIID subunit 10

    Participant: Transcription initiation factor TFIID subunit 10

    Accession: EBI-1189577

    Name: EBI-18889

    Confidences:

    Type
    Value
    No records found.

    17
    EBI-17958
     logo
    dastyLogo
    YBR0739
    YBR081C
    SPT7
    Transcriptional activator SPT7
    Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    neutral component
    Experimental role: neutral component
    Accession: EBI-55

    Name: neutral component

    Description: neutral component

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0497
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule role in an experimental setting that does not have an embedded asymmetry.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transcriptional activator SPT7

    Participant: Transcriptional activator SPT7

    Accession: EBI-1189578

    Name: EBI-17958

    P
    Participant: Transcriptional activator SPT7

    Participant: Transcriptional activator SPT7

    Accession: EBI-1189578

    Name: EBI-17958

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transcriptional activator SPT7

    Participant: Transcriptional activator SPT7

    Accession: EBI-1189578

    Name: EBI-17958

    Stoichiometry: 0.0

    F
    Participant: Transcriptional activator SPT7

    Participant: Transcriptional activator SPT7

    Accession: EBI-1189578

    Name: EBI-17958

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transcriptional activator SPT7

    Participant: Transcriptional activator SPT7

    Accession: EBI-1189578

    Name: EBI-17958

    Confidences:

    Type
    Value
    No records found.


    Graphical Representation of Experimental Features