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GCD6
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Saccharomyces cerevisiae
GCD6 is differentially expressed in 23 experiments: 7 compound treatments: methyl methanesulfonate, none, ... (5 more);, 2 developmental stages: meiotic development, mitotic growth;, 9 genotypes 10 growth conditions 2 material types and 5 other conditions.
Orthologs EIF2B5 (Bos taurus)   eif2b5 (Danio rerio)   Eif2b5 (Rattus norvegicus)   ENSCING00000000067 (Ciona intestinalis)   ENSCING00000014650 (Ciona intestinalis)   Eif2b5 (Mus musculus)   EIF2B5 (Gallus gallus)   EIF2B5 (Homo sapiens)   EIF2B5 (2 of 2) (Danio rerio)   eIF2B-epsilon (Drosophila melanogaster)   eif2b5 (Xenopus laevis)   (Compare orthologs)
InterPro Term Trimer_LpxA-like, ARM-type_fold, eIF5C, NTP_transferase
Gene Ontology Term RNA metabolic process, regulation of translation, regulation of translational initiation, translation, guanyl-nucleotide exchange factor activity, eukaryotic translation initiation factor 2B complex, translational initiation, translation initiation factor activity, biosynthetic process, transferase activity, binding, nucleotidyltransferase activity, guanyl-nucleotide exchange factor complex
UniProt Accession P32501
Search EB-eye YDR211W
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Experimental Factors
Compound treatment

studied in E-GEOD-2224, E-GEOD-2343, E-GEOD-17257, E-MEXP-998, E-GEOD-4669, ... (6 experiments)

3
1
Number of published studies where the gene is over/under expressed compared to the gene's overall mean expression level in the study.
Factor Value U/D Experiments
methyl methanesulfonate
1
2
E-GEOD-2343, E-GEOD-2224
1% DMSO
1
E-GEOD-17257
doxycycline
1
1
E-GEOD-3200
hydrogen peroxide
1
1
E-MEXP-998
alpha-tomatine
1
E-GEOD-4669
80 µM CQ
1
E-GEOD-17257
1 more value(s).


Developmental stage

studied in E-TABM-291

Factor Value U/D Experiments
meiotic development
1
E-TABM-291
mitotic growth
1
E-TABM-291


Genotype

studied in E-TABM-291, E-TABM-544, E-GEOD-1934, E-MEXP-1407, E-GEOD-3200, ... (6 experiments)

Factor Value U/D Experiments
MATa URA3 HIS3 TRP1 LEU2 SUC2 MAL2–8C snf4(4,966)::loxP-Kan-loxP
1
E-MEXP-1407
IFH1-13myc-TRP1
1
E-GEOD-1934
tetO2-PAF1-6HA
1
E-GEOD-3200
sip2Δ gal83Δ
1
E-GEOD-20591
erg5
1
E-TABM-544
MATa URA3 HIS3 TRP1 LEU2 SUC2 MAL2-8C
1
E-MEXP-1407
3 more value(s).


Growth condition

studied in E-TABM-291, E-GEOD-1313, E-GEOD-21988, E-MTAB-78, E-GEOD-8379, ... (8 experiments)

Factor Value U/D Experiments
control
1
E-GEOD-1314
dessication
1
E-GEOD-1314
nitrogen limitation with glucose as carbon source
1
E-GEOD-21988
3 days in YPD (control)
1
E-GEOD-8379
YPD media
1
E-TABM-291
aerobic
1
1
E-MTAB-78
4 more value(s).


Material type

studied in E-MEXP-526

Factor Value U/D Experiments
total_RNA
1
E-MEXP-526
monosomal_RNA
1
E-MEXP-526


Protocol type

studied in E-MEXP-2581

Factor Value U/D Experiments
light
1
E-MEXP-2581
heavy
1
E-MEXP-2581


Strain Background is FY23 x FY86 (Winston et al. 1995), carrying the auxotrophic markers
studied in E-GEOD-11801

Strain or line
studied in E-GEOD-1314

Temperature
studied in E-TABM-291

Treatment
studied in E-GEOD-15254

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Gene Expression Atlas 2.0.11.1- 12/23/11 3:09:34 PM