PRP4
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Saccharomyces cerevisiae |
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PRP4 is differentially expressed in 22 experiments: 7 compound treatments: none, methyl methanesulfonate, ... (5 more);, 2 developmental stages: meiotic development, mitotic growth;, 17 genotypes 9 growth conditions 3 material types and 5 other conditions. |
| Synonyms |
RNA4 |
| Orthologs |
LOC100362836
(Rattus norvegicus)
WDR69
(Gallus gallus)
LOC363267
(Rattus norvegicus)
WDR69
(Bos taurus)
poc1b
(Danio rerio)
PRPF4
(Gallus gallus)
ENSCING00000009330
(Ciona intestinalis)
POC1A
(Homo sapiens)
Poc1b
(Mus musculus)
wdr69
(Danio rerio)
Prpf4
(Mus musculus)
ENSCING00000001299
(Ciona intestinalis)
POC1B
(Homo sapiens)
A5PKH9_BOVIN
(Bos taurus)
POC1A
(Gallus gallus)
PRP4_BOVIN
(Bos taurus)
POC1A_BOVIN
(Bos taurus)
PRPF4 (2 of 2)
(Danio rerio)
Prpf4
(Rattus norvegicus)
Poc1a
(Mus musculus)
WDR69
(Homo sapiens)
Wdr51a
(Rattus norvegicus)
PRPF4
(Homo sapiens)
Wdr69
(Mus musculus)
poc1a
(Danio rerio)
prpf4
(Danio rerio)
ENSCING00000007834
(Ciona intestinalis)
CG7568
(Drosophila melanogaster)
Poc1
(Drosophila melanogaster)
U4-U6-60K
(Drosophila melanogaster)
poc1a
(Xenopus tropicalis)
ENSXETG00000012678
(Xenopus tropicalis)
prpf4
(Xenopus tropicalis)
poc1b
(Xenopus tropicalis)
wdr69
(Xenopus tropicalis)
(Compare orthologs)
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| Gene Ontology ID |
GO:0008380, GO:0005515 |
| Gene Ontology Term |
RNA splicing, protein binding |
| InterPro ID |
IPR001680, IPR017986, IPR019775, IPR020472, IPR003648, IPR011046 |
| Ensembl Family Description |
U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4 U4/U6 SNRNP 60 KDA WD SPLICING FACTOR PRP4 |
| Ensembl Family |
ENSFM00260000050846 |
| EMBL-Bank ID |
U25842, M26597, M28518, BK006949 |
| UniProt Accession |
P20053 |
| RefSeq ID |
NP_015504 |
| Ensembl Protein ID |
YPR178W |
| Entrez Gene ID |
856307 |
| Description |
Splicing factor, component of the U4/U6-U5 snRNP complex [Source:SGD;Acc:S000006382] |
| Ensembl Gene ID |
YPR178W |
| Ensembl Transcript ID |
YPR178W |
| InterPro Term |
WD40-repeat-containing domain, G-protein beta WD-40 repeat, WD40 repeat-like-containing domain, Splicing factor motif, WD40 repeat, conserved site, WD40 repeat |
| Design Element |
1770289_at, YPR178W, 7576_at |
| EMAGE ID |
|
| Search EB-eye |
YPR178W
|
 Show more
properties
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studied in
E-GEOD-2224, E-GEOD-423, E-GEOD-2343, E-MTAB-643, E-GEOD-4669,
... (6 experiments)
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Number of published studies where the gene is over/under expressed compared to the gene's overall mean
expression level in the study.
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studied in
E-TABM-291
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studied in
E-TABM-291, E-MEXP-585, E-MEXP-1551, E-MEXP-27, E-GEOD-1934,
... (10 experiments)
| Factor Value |
U/D
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Experiments |
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dcp1::URA3
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1
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E-MEXP-26
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alpha ade2-1 his3- leu2-3,112 trp1-1 ura3-1 [WT]
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1
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E-MEXP-585
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UASGAL1-IFH1-13myc-TRP1
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1
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E-GEOD-1934
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rnt1 delta
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1
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E-GEOD-2683
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MATalpha; cdc13-1-int mfa::MFA1pr-HIS3 can1 ura3 leu2 his3 lys2
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1
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E-MEXP-1551
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abf1-1 hypomorph / GAL-ABF1 overexpression transgene
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1
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E-TABM-291
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studied in
E-TABM-291, E-MTAB-78, E-GEOD-8379, E-GEOD-1314
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studied in
E-MEXP-526
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studied in
E-MEXP-2581
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studied in
E-GEOD-11801
studied in
E-GEOD-4135
studied in
E-TABM-291
studied in
E-GEOD-15254
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