TIF1
close
Please copy/paste those URLs into your code to get same results in machine-readable formats:
|
Saccharomyces cerevisiae |
|
TIF1 is differentially expressed in 12 experiments: 4 compound treatments: DMSO 1 volume percent, clioquinol 80 micromolar, ... (2 more);, 3 cell stages: 1hr HU arrest after release from 4hr α-factor arrest, Asynchronous, ... (1 more);, 2 developmental stages 6 genotypes 8 growth conditions and 3 other conditions. |
| Synonyms |
eIF4A |
| Orthologs |
IF4A2_CHICK
(Gallus gallus)
EIF4A3
(Homo sapiens)
Gm8994
(Mus musculus)
E1BSE5_CHICK
(Gallus gallus)
EIF4A2
(Homo sapiens)
DDX20
(Homo sapiens)
F6WTF3_CIOIN
(Ciona intestinalis)
eif4a1b
(Danio rerio)
Eif4a1
(Rattus norvegicus)
Ddx20
(Rattus norvegicus)
EIF4A1
(Homo sapiens)
Ddx20
(Mus musculus)
Eif4a2
(Rattus norvegicus)
F1P5C0_CHICK
(Gallus gallus)
eif4a3
(Danio rerio)
IF4A1_BOVIN
(Bos taurus)
eif4a2
(Danio rerio)
Eif4a3
(Mus musculus)
IF4A2_BOVIN
(Bos taurus)
D3ZVJ6_RAT
(Rattus norvegicus)
Eif4a1
(Mus musculus)
F1MRW7_BOVIN
(Bos taurus)
Eif4a2
(Mus musculus)
ddx20
(Danio rerio)
ENSCING00000007818
(Ciona intestinalis)
IF4A3_BOVIN
(Bos taurus)
Gem3
(Drosophila melanogaster)
eIF-4a
(Drosophila melanogaster)
eIF4AIII
(Drosophila melanogaster)
eif4a1
(Xenopus tropicalis)
Gm5576
(Mus musculus)
eif4a1a
(Danio rerio)
eif4a3
(Xenopus tropicalis)
ddx20
(Xenopus tropicalis)
eif4a2
(Xenopus tropicalis)
(Compare orthologs)
|
| Gene Ontology ID |
GO:0003676, GO:0008026, GO:0004386, GO:0005524 |
| InterPro ID |
IPR001650, IPR011545, IPR000629, IPR014001, IPR014014 |
| Gene Ontology Term |
ATP-dependent helicase activity, nucleic acid binding, ATP binding, helicase activity |
| Ensembl Family |
ENSFM00400000131727 |
| Ensembl Family Description |
ATP DEPENDENT RNA HELICASE EIF4A EUKARYOTIC INITIATION FACTOR 4A |
| EMBL-Bank ID |
Z49413, U25436, X58099, Z28284, X12814, X12813, X87371, BK006943, BK006944 |
| UniProt Accession |
P10081 |
| Entrez Gene ID |
853933, 853303 |
| RefSeq ID |
NP_012985, NP_012397 |
| Ensembl Gene ID |
YKR059W |
| Ensembl Protein ID |
YKR059W |
| Description |
Translation initiation factor eIF4A, identical to Tif2p; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G [Source:SGD;Acc:S000001767] |
| Ensembl Transcript ID |
YKR059W |
| InterPro Term |
RNA helicase, ATP-dependent, DEAD-box, conserved site, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, Helicase, C-terminal, RNA helicase, DEAD-box type, Q motif, DEAD-like helicase |
| Design Element |
1779786_s_at, YKR059W, 11156_s_at |
| EMAGE ID |
|
| Search EB-eye |
YKR059W
|
 Show more
properties
|
|
|
studied in
E-GEOD-17257, E-GEOD-3200
|
|
Number of published studies where the gene is over/under expressed compared to the gene's overall mean
expression level in the study.
|
|
studied in
E-GEOD-33677
|
|
studied in
E-TABM-291
|
studied in
E-TABM-291, E-GEOD-1934, E-GEOD-3200
|
|
studied in
E-TABM-291, E-GEOD-8379, E-MEXP-593, E-MEXP-2127
|
studied in
E-GEOD-11801
| Factor Value |
U/D
|
Experiments |
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52. The strain contains deletions in the genes RRP6, LSM1, and PAT1.
|
1
|
E-GEOD-11801
|
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52. The strain contains deletions in the genes XRN1, RRP6, LSM1, and PAT1.
|
1
|
E-GEOD-11801
|
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52.
|
1
|
E-GEOD-11801
|
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52. The strain contains deletions in the genes SKI2, SKI8, and RRP6.
|
1
|
E-GEOD-11801
|
|
studied in
E-TABM-291
studied in
E-GEOD-15254
|
|
|
Processing time: 4.803 secs.
