VAC8
close
Please copy/paste those URLs into your code to get same results in machine-readable formats:
|
Saccharomyces cerevisiae |
|
VAC8 is differentially expressed in 19 experiments: 4 compound treatments: methyl methanesulfonate, none, ... (2 more);, 2 developmental stages: meiotic development, mitotic growth;, 15 genotypes 10 growth conditions 2 material types and 3 other conditions. |
| Synonyms |
YEB3 |
| Orthologs |
ARMC4
(Homo sapiens)
ENSCING00000009585
(Ciona intestinalis)
CTNB1_BOVIN
(Bos taurus)
Armc4
(Mus musculus)
CABZ01092303.1
(Danio rerio)
ARMC4
(Gallus gallus)
ENSCING00000007020
(Ciona intestinalis)
ENSGALG00000003676
(Gallus gallus)
CTNNB1
(Gallus gallus)
ARMC4
(Danio rerio)
Jup
(Rattus norvegicus)
ctnnb1
(Danio rerio)
ARMC4
(Bos taurus)
Armc4
(Rattus norvegicus)
Jup
(Mus musculus)
jup
(Danio rerio)
JUP
(Homo sapiens)
Ctnnb1
(Rattus norvegicus)
ENSGALG00000017414
(Gallus gallus)
Ctnnb1
(Mus musculus)
CTNNB1
(Homo sapiens)
PLAK_BOVIN
(Bos taurus)
JUP (1 of 2)
(Danio rerio)
ARMC3
(Bos taurus)
Armc3
(Mus musculus)
ARMC3
(Gallus gallus)
ARMC3
(Danio rerio)
ENSCING00000006895
(Ciona intestinalis)
arm
(Drosophila melanogaster)
ARMC3
(Homo sapiens)
CG5155
(Drosophila melanogaster)
LOC100364294
(Rattus norvegicus)
armc4
(Xenopus tropicalis)
ctnnb1
(Xenopus tropicalis)
Gm17697
(Mus musculus)
armc3
(Xenopus tropicalis)
jup
(Xenopus tropicalis)
Q4H3U7_CIOIN
(Ciona intestinalis)
(Compare orthologs)
|
| Gene Ontology ID |
GO:0016020, GO:0016236, GO:0005488, GO:0005515, GO:0005773, GO:0005774, GO:0043495, GO:0071255, GO:0000011, GO:0042144, GO:0000329, GO:0034727, GO:0071561, GO:0071563, GO:0071562 |
| Gene Ontology Term |
macroautophagy, protein binding, vacuolar membrane, membrane, vacuole, binding, protein anchor, Myo2p-Vac17p-Vac8p transport complex, nucleus-vacuole junction, piecemeal microautophagy of nucleus, vacuole fusion, non-autophagic, fungal-type vacuole membrane, nucleus-vacuole junction assembly, vacuole inheritance, CVT vesicle assembly |
| InterPro ID |
IPR000225, IPR016024 |
| InterPro Term |
Armadillo, Armadillo-type fold |
| Ensembl Protein ID |
YEL013W |
| Description |
Phosphorylated and palmitoylated vacuolar membrane protein that interacts with Atg13p, required for the cytoplasm-to-vacuole targeting (Cvt) pathway; interacts with Nvj1p to form nucleus-vacuole junctions [Source:SGD;Acc:S000000739] |
| Entrez Gene ID |
856702 |
| EMBL-Bank ID |
AF005267, U18530, BK006939 |
| Ensembl Family Description |
VACUOLAR 8 |
| Ensembl Gene ID |
YEL013W |
| RefSeq ID |
NP_010903 |
| Ensembl Family |
ENSFM00420000142047 |
| UniProt Accession |
P39968 |
| Ensembl Transcript ID |
YEL013W |
| Design Element |
YEL013W, 5734_at, 1775270_at |
| EMAGE ID |
|
| Search EB-eye |
YEL013W
|
 Show more
properties
|
|
|
studied in
E-GEOD-2224, E-GEOD-2343, E-GEOD-3200
|
|
Number of published studies where the gene is over/under expressed compared to the gene's overall mean
expression level in the study.
|
|
studied in
E-TABM-291
|
|
studied in
E-TABM-291, E-MEXP-1407, E-GEOD-20591, E-TABM-544, E-GEOD-3200,
... (6 experiments)
|
studied in
E-TABM-291, E-GEOD-21988, E-GEOD-2076, E-MTAB-78, E-GEOD-8379,
... (7 experiments)
|
|
studied in
E-MEXP-526
|
studied in
E-GEOD-11801
| Factor Value |
U/D
|
Experiments |
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52. The strain contains deletions in the genes SKI2, SKI8, and RRP6.
|
1
|
E-GEOD-11801
|
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52. The strain contains deletions in the genes XRN1, RRP6, LSM1, and PAT1.
|
1
|
E-GEOD-11801
|
|
his3-delta200, leu2-delta1, trp1-delta63, ura3-52. The strain contains deletions in the genes RRP6, LSM1, and PAT1.
|
1
|
E-GEOD-11801
|
|
studied in
E-TABM-291
studied in
E-GEOD-15254, E-GEOD-33136
|
|
|
Processing time: 2.408 secs.
