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SEC7
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Saccharomyces cerevisiae
SEC7 is differentially expressed in 20 experiments: 8 compound treatments: DMSO 1 volume percent, ammonium, ... (6 more);, 2 affinity selections: Biotin-16-UTP selection with Dynabeads MyOne Streptavidin C1, none;, 2 developmental stages 9 genotypes 13 growth conditions and 5 other conditions.
Orthologs CYTH3 (Gallus gallus)   CYTH1 (Gallus gallus)   Cyth2 (Rattus norvegicus)   CYTH4 (Gallus gallus)   arfgef1 (Danio rerio)   CYTH3 (Bos taurus)   CYTH2 (Danio rerio)   Cyth3 (Mus musculus)   Cyth4 (Mus musculus)   ARFGEF2 (Bos taurus)   ARFGEF1 (Homo sapiens)   ENSCING00000002700 (Ciona intestinalis)   CYTH1 (2 of 2) (Danio rerio)   cyth4b (Danio rerio)   Arfgef2 (Rattus norvegicus)   Cyth4 (Rattus norvegicus)   ARFGEF2 (Gallus gallus)   CYTH4 (2 of 2) (Danio rerio)   ARFGEF2 (Homo sapiens)   CYTH3 (1 of 3) (Danio rerio)   Cyth1 (Mus musculus)   ARFGEF2 (Danio rerio)   ENSGALG00000015553 (Gallus gallus)   CYTH1 (Bos taurus)   CYTH3 (2 of 3) (Danio rerio)   CYTH4 (Homo sapiens)   Arfgef2 (Mus musculus)   Arfgef1 (Mus musculus)   CYH2_BOVIN (Bos taurus)   D4A8L6_RAT (Rattus norvegicus)   cyth1 (Danio rerio)   Arfgef1 (Rattus norvegicus)   CYTH1 (Homo sapiens)   Cyth3 (Rattus norvegicus)   CYTH3 (3 of 3) (Danio rerio)   ARFGEF1 (Bos taurus)   CYTH2 (Homo sapiens)   CYTH4 (Bos taurus)   Cyth2 (Mus musculus)   CYTH3 (Homo sapiens)   sec71 (Drosophila melanogaster)   step (Drosophila melanogaster)   ARFGEF1 (Gallus gallus)   cyth1 (Xenopus tropicalis)   ARFGEF1 (Xenopus tropicalis)   cyth2 (Xenopus tropicalis)   arfgef2 (Xenopus tropicalis)   cyth3 (Xenopus tropicalis)   cyth4 (Xenopus tropicalis)   ENSCING00000018657 (Ciona intestinalis)   (Compare orthologs)
Gene Ontology Term ARF guanyl-nucleotide exchange factor activity, intracellular, binding, regulation of ARF protein signal transduction
UniProt Accession P11075
InterPro Term SEC7-like, Armadillo-type fold, Domain of unknown function DUF1981, SEC7 associated
Search EB-eye YDR170C
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Experimental Factors
Compound treatment

studied in E-GEOD-17257, E-MTAB-78, E-MTAB-643, E-GEOD-3200

3
1
Number of published studies where the gene is over/under expressed compared to the gene's overall mean expression level in the study.
Factor Value U/D Experiments
ammonium
1
E-MTAB-643
clioquinol 80 micromolar
1
E-GEOD-17257
doxycycline
1
1
E-GEOD-3200
nitrogen
1
E-MTAB-78
glucose
1
1
E-MTAB-643
DMSO 1 volume percent
1
E-GEOD-17257
2 more value(s).


affinity selection

studied in E-GEOD-33136

Factor Value U/D Experiments
Biotin-16-UTP selection with Dynabeads MyOne Streptavidin C1
1
E-GEOD-33136
none
1
E-GEOD-33136


developmental stage

studied in E-TABM-291

Factor Value U/D Experiments
meiotic development
1
E-TABM-291
mitotic growth
1
E-TABM-291


genotype

studied in E-TABM-291, E-MEXP-1407, E-GEOD-20591, E-GEOD-4135, E-GEOD-3200, ... (6 experiments)

Factor Value U/D Experiments
wild type
1
E-GEOD-4135
MATa URA3 HIS3 TRP1 LEU2 SUC2 MAL2�8C snf4(4,966)::loxP-Kan-loxP
1
E-MEXP-1407
GAL-ABF1 overexpression transgene, heterozygous
1
E-TABM-291
tetO2-PAF1-6HA
1
E-GEOD-3200
spt6deltaC
1
E-MEXP-2123
H4 Δ2-26
1
E-GEOD-4135
3 more value(s).


growth condition

studied in E-TABM-291, E-MEXP-1139, E-GEOD-21988, E-GEOD-2076, E-MEXP-593, ... (7 experiments)

Factor Value U/D Experiments
0.33 vol/h dilution rate
1
E-MEXP-593
SPII media
1
E-TABM-291
L-alanine limitation
1
E-MEXP-724
L-glutamine limitation
1
E-MEXP-724
glucose-limiting medium
1
E-MEXP-1139
nitrogen limited
1
E-GEOD-2076
7 more value(s).


phenotype

studied in E-GEOD-13889

Factor Value U/D Experiments
expressing plasmid borne histone H3 protein encoding the wild-type sequence
1
E-GEOD-13889


protocol type
studied in E-MEXP-2581

Strain Background is FY23 x FY86 (Winston et al. 1995), carrying the auxotrophic markers
studied in E-GEOD-11801

strain or line
studied in E-GEOD-4135

treatment
studied in E-GEOD-15254

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Gene Expression Atlas 2.0.13- 4/23/12 11:55:46 AM