Gene Expression Atlas home | about the project | faq | feedback | blog | das | api | help
Sema3f
REST API REST API
Mus musculus
Sema3f is differentially expressed in 198 experiments: 99 organism parts: liver, hippocampus, ... (97 more);, 19 disease states: normal, 4T1 tumor-bearing, ... (17 more);, 48 cell types 13 cell lines 36 compound treatments and 27 other conditions.
Synonyms 'Semak', 'Sema IV'
Orthologs Q8AXA8_CHICK (Gallus gallus)   SEMA3F (Homo sapiens)   SEMA3F (Bos taurus)   Sema3f (Rattus norvegicus)   sema3f (Xenopus laevis)   (Compare orthologs)
InterPro Term Ig_sub, Plexin-like, Ig-like, Ig_sub2, Semaphorin/CD100_Ag
Gene Ontology Term negative chemotaxis, protein binding, membrane, extracellular region, axon guidance, multicellular organismal development, receptor activity, neural crest cell migration, chemorepellent activity, negative regulation of axon extension involved in axon guidance
Search EB-eye ENSMUSG00000034684
Show more properties
Experimental Factors
Organism part

studied in E-TABM-1039, E-GEOD-1479, E-GEOD-20160, E-GEOD-3963, E-GEOD-2866, ... (53 experiments)

3
1
Number of published studies where the gene is over/under expressed compared to the gene's overall mean expression level in the study.

anatomogram

Cell line

studied in E-GEOD-21515, E-GEOD-19732, E-MEXP-2554, E-GEOD-11259

Factor Value U/D Experiments
Swiss5
1
E-GEOD-19732
14M1.4
1
E-MEXP-2554
4T1
1
E-GEOD-11259
IP20D-3
1
E-GEOD-21515
R1
1
E-GEOD-21515
Swiss22
1
E-GEOD-19732
7 more value(s).


Cell type

studied in E-GEOD-19401, E-GEOD-2585, E-GEOD-7069, E-GEOD-21749, E-TABM-130, ... (17 experiments)

Factor Value U/D Experiments
embryonic stem cell
2
E-GEOD-7069, E-MEXP-1158
multiple myeloma tumour cell
1
E-GEOD-6980
germinal vesicle oocyte
1
E-MEXP-1146
dermal fibroblast
1
E-GEOD-3142
bone
1
E-GEOD-10246
epidermis
1
E-GEOD-10246
42 more value(s).


Disease state

studied in E-GEOD-21927, E-GEOD-6461, E-GEOD-19004, E-GEOD-21902, E-GEOD-2514, ... (12 experiments)

Factor Value U/D Experiments
multiple myeloma
1
E-GEOD-6980
LPS-induced acute lung injury
1
1
E-GEOD-1871
myocardial infarction
1
E-GEOD-775
mPIN (mouse prostatic intraepithelial neoplasia)
1
E-GEOD-21543
bronchoalveolar adenocarcinoma
1
1
E-MEXP-1137
tumor
1
E-GEOD-21902
13 more value(s).


Compound treatment

studied in E-GEOD-2565, E-TABM-903, E-GEOD-4696, E-GEOD-1301, E-GEOD-21361, ... (22 experiments)

Factor Value U/D Experiments
vehicle - arachis oil
2
E-GEOD-1839, E-GEOD-2195
BMP
2
E-GEOD-18648, E-GEOD-18649
Fenofibrate
1
E-MEXP-3282
MACA
1
E-GEOD-18707
1
1
E-GEOD-10246
T0901317
1
E-MEXP-3282
30 more value(s).


Agent

studied in E-GEOD-32706

Factor Value U/D Experiments
fish oil
1
1
E-GEOD-32706


Amount to core
studied in E-GEOD-18858

Clinical info
studied in E-MEXP-1458

Clinical treatment
studied in E-GEOD-2411

Developmental stage
studied in E-GEOD-1026, E-GEOD-8191, E-GEOD-5831, E-GEOD-2039, E-GEOD-3223, ... (17 experiments)

dose or concentration
studied in E-GEOD-18858

Genotype
studied in E-GEOD-19684, E-GEOD-19004, E-MEXP-1649, E-GEOD-2746, E-TABM-285, ... (33 experiments)

Growth condition
studied in E-GEOD-495

Histology
studied in E-GEOD-15904

in vivo treatment
studied in E-GEOD-18858

Individual
studied in E-GEOD-18858

Infection
studied in E-MEXP-1942, E-GEOD-10964

Light
studied in E-TABM-285

Observation
studied in E-GEOD-3594

Organism
studied in E-MEXP-667

Phenotype
studied in E-GEOD-2640

Protocol type
studied in E-GEOD-16192

Rna integrity number
studied in E-GEOD-18858

Route of exposure
studied in E-GEOD-18858

Strain or line
studied in E-GEOD-3100, E-GEOD-21515, E-GEOD-21278, E-TABM-562, E-MTAB-76, ... (7 experiments)

Treatment
studied in E-GEOD-21902, E-GEOD-18344, E-GEOD-22009, E-GEOD-21841, E-MEXP-1899, ... (7 experiments)

Treatment repeat
studied in E-GEOD-18858

Treatment time
studied in E-GEOD-18858

Units of amount
studied in E-GEOD-18858

Units of duration
studied in E-GEOD-18858

units of treatment repeat
studied in E-GEOD-18858

vehicle for chemical
studied in E-GEOD-18858

Processing time: 0.313 secs.
 
Gene Expression Atlas 2.0.11.1- 12/23/11 3:09:34 PM