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Sncg
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Mus musculus
Sncg is differentially expressed in 165 experiments: 80 organism parts: liver, hippocampus, ... (78 more);, 7 disease states: normal, MMTV-Myc, ... (5 more);, 60 cell types 12 cell lines 16 compound treatments and 21 other conditions.
Synonyms 'persyn', 'C79089'
Orthologs Q9I9H0_CHICK (Gallus gallus)   SNCG (Homo sapiens)   SYUG_BOVIN (Bos taurus)   Sncg (Rattus norvegicus)   sncg (Xenopus laevis)   (Compare orthologs)
Gene Ontology Term cytoskeleton, axon, cytoplasm, adult locomotory behavior, molecular_function, spindle, microtubule organizing center, axon terminus, perinuclear region of cytoplasm, regulation of neurotransmitter secretion, neuronal cell body, regulation of dopamine secretion
InterPro Term Synuclein, Synuclein_gamma
Search EB-eye ENSMUSG00000023064
Show more properties
Experimental Factors
Organism part

studied in E-TABM-1039, E-GEOD-3822, E-MEXP-114, E-GEOD-91, E-GEOD-3963, ... (45 experiments)

3
1
Number of published studies where the gene is over/under expressed compared to the gene's overall mean expression level in the study.

anatomogram

Cell line

studied in E-GEOD-17112, E-GEOD-21515, E-GEOD-1956, E-MEXP-1361, E-MEXP-2554, ... (6 experiments)

Factor Value U/D Experiments
N1E-115 Tcof1 inactivated
1
E-GEOD-1956
14M1.4
1
E-MEXP-2554
colon cancer (colon26)
1
E-GEOD-17112
M-27-PCI-NEO
1
E-MEXP-1361
N1E-115 wild_type
1
E-GEOD-1956
M-27
1
E-MEXP-1361
6 more value(s).


Cell type

studied in E-GEOD-19401, E-GEOD-2585, E-GEOD-7069, E-GEOD-1584, E-GEOD-21309, ... (20 experiments)

Factor Value U/D Experiments
embryonic stem cell
1
2
E-MEXP-1158, E-GEOD-7069, E-MEXP-1405
amygdala
1
E-GEOD-10246
primordial germ cell
1
E-MEXP-1158
CD45+
1
E-GEOD-2057
CD45-
1
E-GEOD-2057
round spermatid
1
E-GEOD-4193
54 more value(s).


Disease state

studied in E-GEOD-2514, E-GEOD-2528, E-GEOD-775, E-GEOD-15904

Factor Value U/D Experiments
MMTV-Myc
1
E-GEOD-15904
myocardial infarction
1
E-GEOD-775
preneoplastic breast cancer
1
E-GEOD-2528
lung adenocarcinoma
1
E-GEOD-2514
sham
1
E-GEOD-775
breast carcinoma
1
E-GEOD-2528
1 more value(s).


Compound treatment

studied in E-GEOD-6440, E-GEOD-21927, E-GEOD-7694, E-GEOD-6085, E-TABM-903, ... (10 experiments)

Factor Value U/D Experiments
pentachloronitrobenzene
1
E-GEOD-5127
In-vitro GM-CSF + G-CSF
1
E-GEOD-21927
N-(1-naphthyl)ethylenediamine dihydrochloride
1
1
E-GEOD-5127
retinoic acid
1
E-TABM-903
valproic acid
1
E-TABM-903
none
1
E-GEOD-2131
10 more value(s).


Amount to core

studied in E-GEOD-18858

Factor Value U/D Experiments
10
1
E-GEOD-18858
15
1
E-GEOD-18858


Clinical info
studied in E-MEXP-1458, E-MEXP-2498

Clinical treatment
studied in E-GEOD-3075

Cohort
studied in E-GEOD-20524

Developmental stage
studied in E-GEOD-8191, E-GEOD-5831, E-GEOD-2039, E-GEOD-2592, E-GEOD-17936, ... (15 experiments)

Disease staging
studied in E-GEOD-17112

Genetic modification
studied in E-GEOD-3172

Genotype
studied in E-GEOD-16533, E-GEOD-30561, E-MEXP-1649, E-GEOD-1948, E-GEOD-2746, ... (17 experiments)

Histology
studied in E-GEOD-15904

in vivo treatment
studied in E-GEOD-18858

Infection
studied in E-MEXP-1190, E-MEXP-1942

infection duration (days)
studied in E-GEOD-20524

infection status
studied in E-GEOD-20524

Observation
studied in E-GEOD-3594, E-GEOD-5296

Organism
studied in E-MEXP-667

Protocol type
studied in E-GEOD-16192

Rna integrity number
studied in E-GEOD-18858

Sex
studied in E-GEOD-3463, E-GEOD-75

Stimulus or stress
studied in E-GEOD-15894

Strain or line
studied in E-GEOD-17936, E-MTAB-76, E-TABM-285, E-GEOD-15293, E-MEXP-1291, ... (6 experiments)

Treatment
studied in E-MTAB-76, E-GEOD-18344, E-MEXP-1899, E-MEXP-2189

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Gene Expression Atlas 2.0.11.1- 12/23/11 3:09:34 PM