SMARCB1
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Homo sapiens |
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SMARCB1 is differentially expressed in 226 experiments: 102 organism parts: cerebellum, ovary, ... (100 more);, 163 disease states: normal, Burkitt's lymphoma, ... (161 more);, 72 cell types 314 cell lines 26 compound treatments and 74 other conditions. |
| Synonyms |
BAF47, hSNFS, SNF5L1, Snr1, RDT, Sfh1p, Ini1 |
| Orthologs |
SNF5_BOVIN
(Bos taurus)
smarcb1b
(Danio rerio)
Q4KLI0_RAT
(Rattus norvegicus)
SNF5_CHICK
(Gallus gallus)
ENSCING00000009008
(Ciona intestinalis)
smarcb1a
(Danio rerio)
Smarcb1
(Mus musculus)
Snr1
(Drosophila melanogaster)
SFH1
(Saccharomyces cerevisiae)
smarcb1
(Xenopus laevis)
SMARCB1
(Canis familiaris)
(Compare orthologs)
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| Gene Ontology ID |
GO:0008285, GO:0003713, GO:0015074, GO:0007049, GO:0016585, GO:0007399, GO:0005625, GO:0005515, GO:0005730, GO:0005634, GO:0005654, GO:0006338, GO:0006357, GO:0000228, GO:0045944, GO:0030154, GO:0016514, GO:0051091, GO:0043923, GO:0030957, GO:0002039, GO:0006337, GO:0001741, GO:0044419, GO:0001835, GO:0001824, GO:0071565, GO:0071564, GO:0045090 |
| Gene Ontology Term |
protein binding, DNA integration, negative regulation of cell proliferation, chromatin remodeling complex, nuclear chromosome, cell differentiation, soluble fraction, cell cycle, positive regulation of transcription from RNA polymerase II promoter, transcription coactivator activity, nucleus, chromatin remodeling, nervous system development, nucleoplasm, regulation of transcription from RNA polymerase II promoter, nucleolus, nBAF complex, npBAF complex, Tat protein binding, SWI/SNF complex, positive regulation by host of viral transcription, blastocyst hatching, XY body, blastocyst development, interspecies interaction between organisms, p53 binding, nucleosome disassembly, retroviral genome replication, positive regulation of sequence-specific DNA binding transcription factor activity |
| InterPro Term |
SNF5, SWI_SNF_chromatin_remodel_cplx |
| Ensembl Family |
ENSFM00500000270601 |
| InterPro ID |
IPR017393, IPR006939 |
| Ensembl Family Description |
SWI/SNF RELATED MATRIX ASSOCIATED ACTIN DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1 |
| UniGene ID |
Hs.534350 |
| HGNC Symbol |
SMARCB1 |
| UniProt Accession |
Q17S11, B5MCL5, C9JTA6, Q12824, Q86WI6 |
| EMBL-Bank ID |
Y17118, Y17119, Y17122, Y17123, Y17121, Y17125, Y17124, Y17120, Y17126, AK021419, BC117114, AB017523, AJ011738, AJ011737, BC143667, CH471095, AP000349, AP000350, CR456581, U04847, DQ230988, AY207472 |
| RefSeq ID |
NM_003073, NM_001007468, NP_003064, NP_001007469 |
| Ensembl Gene ID |
ENSG00000099956 |
| Ensembl Protein ID |
ENSP00000385226, ENSP00000383984, ENSP00000340883, ENSP00000263121, ENSP00000388489, ENSP00000440039 |
| Entrez Gene ID |
6598 |
| Gene-Disease Assocation |
SCHWANNOMATOSIS, RHABDOID TUMOR PREDISPOSITION SYNDROME 1; RTPS1 |
| Description |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:HGNC Symbol;Acc:11103] |
| Ensembl Transcript ID |
ENST00000417137, ENST00000263121, ENST00000477836, ENST00000407422, ENST00000541530, ENST00000407082, ENST00000491967, ENST00000344921 |
| Design Element |
40416_at, ENST00000541530, ENST00000344921, ENST00000417137, 231324_at, 86416_at, Hs.198671.0.A1_3p_at, ENST00000491967, 212167_s_at, ENST00000263121, ENST00000477836, ENST00000407422, Hs.159971.2.A1_3p_a_at, ENST00000407082 |
| Search EB-eye |
ENSG00000099956
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