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NLRC4
REST API REST API
Homo sapiens
NLRC4 is differentially expressed in 99 experiments: 15 organism parts: lung, bone marrow, ... (13 more);, 40 disease states: normal, adrenocortical carcinoma, ... (38 more);, 31 cell types 15 cell lines 15 compound treatments and 34 other conditions.
Synonyms CARD12, ipaf, CLAN1, CLANA, CLANB, CLANC, CLAND, CLAN, CLR2.1
Orthologs NLRC4 (Bos taurus)   Nlrc4 (Mus musculus)   D3ZA97_RAT (Rattus norvegicus)   nlrc4 (Xenopus laevis)   (Compare orthologs)
Gene Ontology Term cytosol, protein binding, cytoplasm, intracellular, innate immune response, activation of caspase activity, positive regulation of apoptosis, ATP binding, magnesium ion binding, defense response to bacterium, nucleotide binding, protein homodimerization activity, regulation of apoptosis, detection of bacterium, activation of innate immune response, interleukin-1 beta secretion, inflammatory response, regulation of cysteine-type endopeptidase activity involved in apoptotic process
InterPro Term NACHT_NTPase, CARD
UniProt Accession Q9NPP4
Search EB-eye ENSG00000091106
Show more properties
Experimental Factors
Organism part

studied in E-GEOD-17189, E-GEOD-6573, E-GEOD-18105, E-MTAB-69, E-GEOD-7307, ... (6 experiments)

3
1
Number of published studies where the gene is over/under expressed compared to the gene's overall mean expression level in the study.

anatomogram

Cell line

studied in E-GEOD-5823, E-GEOD-12662, E-GEOD-19639, E-GEOD-24147, E-GEOD-19480 ... (5 experiments)

Factor Value U/D Experiments
HeLa
2
1
E-GEOD-5823
ZR75-1
1
E-GEOD-19639
BT-474
1
E-GEOD-5823
HL-60
2
1
E-GEOD-24147
K562
2
1
E-GEOD-24147
KG1
1
E-GEOD-24147
9 more value(s).


Cell type

studied in E-GEOD-18811, E-GEOD-19069, E-GEOD-22373, E-GEOD-20033, E-MEXP-1403, ... (17 experiments)

Factor Value U/D Experiments
monocyte
1
2
E-GEOD-11755, E-GEOD-22373, E-GEOD-7307
B cell
2
1
E-GEOD-13987
memory B cell
1
E-TABM-702
hematopoietic stem cell
1
E-MEXP-1403
plasma cell
1
E-MEXP-2360
T cell
1
E-GEOD-13987
25 more value(s).


Disease state

studied in E-MEXP-1922, E-GEOD-6872, E-GEOD-9692, E-GEOD-1145, E-TABM-282, ... (27 experiments)

Factor Value U/D Experiments
adrenocortical carcinoma
2
E-TABM-311, E-GEOD-10927
Mantle cell lymphoma
1
E-GEOD-18736
leiomyosarcoma
1
E-MEXP-1922
undifferentiated sarcoma
1
E-MEXP-1922
breast carcinoma
1
E-TABM-276
gastric carcinoma
1
E-GEOD-15460
34 more value(s).


Compound treatment

studied in E-MEXP-1601, E-GEOD-7400, E-TABM-782, E-GEOD-4984, E-TABM-868, ... (9 experiments)

Factor Value U/D Experiments
lipopolysaccharide
2
E-MEXP-1958, E-TABM-868
anti-CD3 antibody (clone:OKT3)
1
E-MEXP-1601
HMB-PP (phosphoantigen)
1
1
E-MEXP-1601
galectin-1
1
E-GEOD-4984
Cxcl12
1
1
E-GEOD-7307
no estradiol
1
E-GEOD-20081
9 more value(s).


Agent

studied in E-GEOD-19519

Factor Value U/D Experiments
thapsigargin
1
1
E-GEOD-19519
tunicamycin
1
1
E-GEOD-19519


BioSourceProvider
studied in E-GEOD-19519, E-GEOD-19480

Clinical history
studied in E-GEOD-19743, E-GEOD-7967, E-GEOD-21374, E-GEOD-21589, E-GEOD-16363 ... (5 experiments)

Clinical info
studied in E-GEOD-19743, E-GEOD-21589, E-GEOD-16363, E-GEOD-13896, E-GEOD-19665 ... (5 experiments)

coriell cell line repository identifier
studied in E-GEOD-19519

dfs time (months)
studied in E-GEOD-21653

Disease staging
studied in E-GEOD-19743, E-GEOD-7788, E-GEOD-19665

Environmental stress
studied in E-GEOD-1643, E-GEOD-4086

family id
studied in E-GEOD-19519

Family relationship
studied in E-MEXP-1425

Genotype
studied in E-GEOD-18736, E-TABM-868, E-MEXP-1403

Growth condition
studied in E-MEXP-2657, E-GEOD-12773, E-MEXP-2146

Histology
studied in E-GEOD-21653, E-TABM-276

Individual
studied in E-TABM-325, E-MEXP-1290, E-MEXP-2069, E-TABM-666, E-MEXP-1648, ... (15 experiments)

Infection
studied in E-GEOD-12108

Injury
studied in E-GEOD-19743

Karyotype
studied in E-GEOD-22056

Material type
studied in E-GEOD-9171

Metastasis
studied in E-GEOD-18105

Molecular subtype
studied in E-GEOD-21653

Organism
studied in E-TABM-84

Organism status
studied in E-GEOD-19188

Phase
studied in E-GEOD-4888

Phenotype
studied in E-GEOD-19703, E-MEXP-1403

Protocol type
studied in E-GEOD-19445, E-GEOD-19246

Replicate
studied in E-GEOD-18791

Sample preparation
studied in E-GEOD-16728, E-GEOD-12710

Sampling time point
studied in E-GEOD-16797, E-GEOD-19743

Sex
studied in E-GEOD-19743

Stimulation
studied in E-GEOD-4883, E-GEOD-20114

stimulus
studied in E-GEOD-22103

Survival time
studied in E-GEOD-19188

Treatment
studied in E-GEOD-16837, E-MEXP-973, E-GEOD-19246, E-GEOD-12198

Tumor grading
studied in E-GEOD-4290

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Gene Expression Atlas 2.0.11.1- 12/23/11 3:09:34 PM