Supporting information for the paper "An algorithm for progressive multiple alignment of sequences with insertions".

CAV2

• unaligned sequences
• alignment guide tree
• alignment HMM: HKY

• ClustalW (fasta) (pdf)
• ClustalW_0 (fasta) (pdf)
• HKY+ (fasta) (pdf)
• HKY+F (fasta) (pdf)