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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF08173 - YbgT_YccB)
FAM  PF08173
PID  YbgT_YccB
DES  Membrane bound YbgT-like protein
ANO  12
ALN  28
AID  0.467633
APH  ((((((((Q83CY4_COXBU/15-42:0.22882,(Q8FWE3_BRUSU/14-41:0.34731,Q7W3K9_BORPA/1-28:0.00000):0.09401):0.07765,Q8P8K6_XANCP/1-28:0.36590):0.09834,Q62F72_BURMA/1-28:0.21062):0.00000,Q609X0_METCA/1-28:0.23374):0.08131,(YBGT_ECOLI/1-28:0.28883,Q8DAM9_VIBVU/1-28:0.00000):0.11303):0.25508,YCCB_ECOLI/1-28:0.88809):0.36449,Q5NI15_FRATT/1-28:0.50046):0.49086,Q7VKT8_HAEDU/1-28:0.35980,Q65UN6_MANSM/1-28:0.06651);
ATP  ((((((((Q83CY4_COXBU/15-42,(Q8FWE3_BRUSU/14-41,Q7W3K9_BORPA/1-28)),Q8P8K6_XANCP/1-28),Q62F72_BURMA/1-28),Q609X0_METCA/1-28),(YBGT_ECOLI/1-28,Q8DAM9_VIBVU/1-28)),YCCB_ECOLI/1-28),Q5NI15_FRATT/1-28),Q7VKT8_HAEDU/1-28,Q65UN6_MANSM/1-28);
ATL  5.00872
DNO  11
DLN  84
DID  0.545887
DPH  ((((((((Q8FWE3_BRUSU/14-41:0.37944,Q7W3K9_BORPA/1-28:0.00000):0.09154,Q8P8K6_XANCP/1-28:0.30737):0.03839,(YCCB_ECOLI/1-28:0.56743,Q62F72_BURMA/1-28:0.17840):0.00000):0.07983,Q83CY4_COXBU/15-42:0.27735):0.05357,Q609X0_METCA/1-28:0.17906):0.20880,Q8DAM9_VIBVU/1-28:0.08727):0.21197,Q5NI15_FRATT/1-28:0.38774):0.29965,Q7VKT8_HAEDU/1-28:0.33305,Q65UN6_MANSM/1-28:0.17443);
DTP  ((((((((Q8FWE3_BRUSU/14-41,Q7W3K9_BORPA/1-28),Q8P8K6_XANCP/1-28),(YCCB_ECOLI/1-28,Q62F72_BURMA/1-28)),Q83CY4_COXBU/15-42),Q609X0_METCA/1-28),Q8DAM9_VIBVU/1-28),Q5NI15_FRATT/1-28),Q7VKT8_HAEDU/1-28,Q65UN6_MANSM/1-28);
DTL  3.83358
RID  0.455772
RPH  (((Q609X0_METCA/1-28:0.22650,Q62F72_BURMA/1-28:0.22368):0.00000,(Q8DAM9_VIBVU/1-28:0.10707,(YCCB_ECOLI/1-28:0.87951,((Q7VKT8_HAEDU/1-28:0.35406,Q65UN6_MANSM/1-28:0.07315):0.48401,Q5NI15_FRATT/1-28:0.51015):0.35647):0.26461):0.08331):0.15621,(Q83CY4_COXBU/15-42:0.20058,Q8P8K6_XANCP/1-28:0.37128):0.03717,(Q8FWE3_BRUSU/14-41:0.34823,Q7W3K9_BORPA/1-28:0.00000):0.10750);
RTP  (((Q609X0_METCA/1-28,Q62F72_BURMA/1-28),(Q8DAM9_VIBVU/1-28,(YCCB_ECOLI/1-28,((Q7VKT8_HAEDU/1-28,Q65UN6_MANSM/1-28),Q5NI15_FRATT/1-28)))),(Q83CY4_COXBU/15-42,Q8P8K6_XANCP/1-28),(Q8FWE3_BRUSU/14-41,Q7W3K9_BORPA/1-28));
RTL  4.78349
LNK  Q5NI15_FRATT/1-28:Q5NI15:AJ749949
LNK  Q609X0_METCA/1-28:Q609X0:AE017282
LNK  Q62F72_BURMA/1-28:Q62F72:CP000010
LNK  Q65UN6_MANSM/1-28:Q65UN6:AE016827
LNK  Q7VKT8_HAEDU/1-28:Q7VKT8:AE017155
LNK  Q7W3K9_BORPA/1-28:Q7W3K9:BX640435
LNK  Q83CY4_COXBU/15-42:Q83CY4:AE016963
LNK  Q8DAM9_VIBVU/1-28:Q8DAM9:AE016804
LNK  Q8FWE3_BRUSU/14-41:Q8FWE3:AE014292
LNK  Q8P8K6_XANCP/1-28:Q8P8K6:AE012331
LNK  YBGT_ECOLI/1-28:P56100:
LNK  YCCB_ECOLI/1-28:P24244:M58708
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q5NI15_FRATT/1-28
ASQ  MYYLAWIISAGLAVTVGCFVATRLEKKE
DSQ  ATGTATTATTTAGCATGGATTATATCAGCTGGTCTAGCAGTTACAGTAGGTTGTTTCGTAGCTACTAGATTAGAAAAAAAAGAA
TRN  10010101110011000
NAM  Q62F72_BURMA/1-28
ASQ  MWYFSWILGIGVALAFGIINAMWLEARQ
DSQ  ATGTGGTACTTCAGCTGGATTCTCGGCATCGGCGTCGCGCTCGCGTTCGGCATCATCAATGCGATGTGGCTCGAAGCGCGGCAA
TRN  11011111111111111
NAM  Q83CY4_COXBU/15-42
ASQ  MWYFAWILGFGLACAFAILNALWFELER
DSQ  ATGTGGTATTTTGCTTGGATTCTAGGATTCGGTTTGGCTTGTGCATTCGCCATTCTTAACGCATTATGGTTTGAATTAGAGCGC
TRN  11011111111111110
NAM  Q7W3K9_BORPA/1-28
ASQ  MWYFSWILGLSLACAFGILNAMWFELRE
DSQ  ATGTGGTATTTCTCTTGGATTCTTGGCCTGAGCCTGGCGTGTGCGTTCGGCATCCTGAATGCGATGTGGTTCGAGTTGCGCGAA
TRN  11011111101111111
NAM  Q8FWE3_BRUSU/14-41
ASQ  MWYFSWLLGLPLAAAFAVLNAMWYELMD
DSQ  ATGTGGTATTTTTCGTGGCTTTTGGGCCTGCCGCTTGCAGCCGCGTTCGCTGTGCTGAATGCGATGTGGTATGAGCTGATGGAC
TRN  11011111101111111
NAM  Q8P8K6_XANCP/1-28
ASQ  MWYFAWILGTGLAALAAVLNGMWFEARE
DSQ  ATGTGGTATTTCGCATGGATTCTTGGCACCGGTCTGGCCGCACTGGCTGCCGTGCTCAACGGCATGTGGTTCGAGGCGCGCGAG
TRN  11011111101111111
NAM  Q609X0_METCA/1-28
ASQ  MWYFAWILGVGFACAFGVINAMWLESVC
DSQ  ATGTGGTATTTCGCGTGGATACTCGGGGTGGGTTTCGCATGTGCATTCGGTGTCATCAATGCCATGTGGTTGGAATCGGTCTGT
TRN  10010111110111011
NAM  Q8DAM9_VIBVU/1-28
ASQ  MWYFAWILGVLLACAFGIINALWLEHSE
DSQ  ATGTGGTATTTCGCATGGATTCTGGGTGTACTATTAGCGTGTGCATTCGGCATTATTAATGCTCTTTGGTTAGAGCACAGTGAA
TRN  11011111101111110
NAM  YBGT_ECOLI/1-28
ASQ  MWYFAWILGTLLACSFGVITALALEHVE
NAM  Q65UN6_MANSM/1-28
ASQ  MFYLAWVVGVLLAILASVMITIRIEKSG
DSQ  ATGTTTTATTTAGCTTGGGTAGTGGGTGTGTTGTTAGCTATTTTAGCCAGTGTGATGATTACAATACGCATTGAAAAATCTGGA
TRN  10010101110011010
NAM  Q7VKT8_HAEDU/1-28
ASQ  MFYVTWVLGILLAILFATVVTIGIEKSG
DSQ  ATGTTTTATGTAACATGGGTATTAGGTATTTTACTTGCTATTCTTTTTGCGACAGTGGTCACAATTGGCATTGAGAAAAGCGGT
TRN  11011101111011010
NAM  YCCB_ECOLI/1-28
ASQ  MWYLLWFVGILLMCSLSTLVLVWLDPRL
DSQ  ATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTG
TRN  11011111101111110
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