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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF08061 - P68HR)
FAM  PF08061
PID  P68HR
DES  P68HR (NUC004) repeat
ANO  7
ALN  35
AID  0.416028
APH  (Q9W744_CHICK/480-514:0.28304,Q6P4W2_XENTR/493-521:0.22649,((Q9W744_CHICK/534-564:0.14384,((DDX5_HUMAN/551-583:0.00000,Q28465_MACEU/165-193:0.26152):0.07502,Q6P4W2_XENTR/545-576:0.72079):0.13618):1.63178,DDX5_HUMAN/498-532:0.00000):0.06920);
ATP  (Q9W744_CHICK/480-514,Q6P4W2_XENTR/493-521,((Q9W744_CHICK/534-564,((DDX5_HUMAN/551-583,Q28465_MACEU/165-193),Q6P4W2_XENTR/545-576)),DDX5_HUMAN/498-532));
ATL  3.54786
DNO  7
DLN  105
DID  0.526309
DPH  ((((DDX5_HUMAN/551-583:0.01216,Q28465_MACEU/165-193:0.20416):0.06567,(Q9W744_CHICK/534-564:0.15414,Q6P4W2_XENTR/545-576:0.64918):0.02917):0.69357,Q6P4W2_XENTR/493-521:0.25144):0.01280,DDX5_HUMAN/498-532:0.14791,Q9W744_CHICK/480-514:0.13584);
DTP  ((((DDX5_HUMAN/551-583,Q28465_MACEU/165-193),(Q9W744_CHICK/534-564,Q6P4W2_XENTR/545-576)),Q6P4W2_XENTR/493-521),DDX5_HUMAN/498-532,Q9W744_CHICK/480-514);
DTL  2.35604
RID  0.416028
RPH  (Q9W744_CHICK/480-514:0.28304,Q6P4W2_XENTR/493-521:0.22649,((Q9W744_CHICK/534-564:0.14384,((DDX5_HUMAN/551-583:0.00000,Q28465_MACEU/165-193:0.26152):0.07502,Q6P4W2_XENTR/545-576:0.72079):0.13618):1.63178,DDX5_HUMAN/498-532:0.00000):0.06920);
RTP  (Q9W744_CHICK/480-514,Q6P4W2_XENTR/493-521,((Q9W744_CHICK/534-564,((DDX5_HUMAN/551-583,Q28465_MACEU/165-193),Q6P4W2_XENTR/545-576)),DDX5_HUMAN/498-532));
RTL  3.54786
LNK  DDX5_HUMAN/498-532:P17844:X52104
LNK  DDX5_HUMAN/551-583:P17844:X52104
LNK  Q28465_MACEU/165-193:Q28465:L15441
LNK  Q6P4W2_XENTR/493-521:Q6P4W2:BC063223
LNK  Q6P4W2_XENTR/545-576:Q6P4W2:BC063223
LNK  Q9W744_CHICK/480-514:Q9W744:AF158370
LNK  Q9W744_CHICK/534-564:Q9W744:AF158370
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9W744_CHICK/480-514
ASQ  SAGKRGGFSSFRERENFERTYGALGKRDFGAKAQN
DSQ  TCTGCGGGCAAAAGGGGTGGATTTAGTAGCTTTAGAGAGAGGGAGAACTTTGAGAGAACTTATGGTGCACTAGGAAAGAGAGACTTTGGAGCCAAAGCTCAAAAT
TRN  10010101110011011
NAM  Q6P4W2_XENTR/493-521
ASQ  SSGKRGGW----DRENYDRGFGG--KRDFGNKSQN
DSQ  TCTTCAGGCAAGCGGGGTGGGTGG------------GACCGGGAAAACTATGACCGTGGGTTTGGCGGC------AAGAGAGACTTTGGCAACAAATCCCAAAAT
TRN  10110101110011001
NAM  DDX5_HUMAN/498-532
ASQ  SAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQN
DSQ  TCTGCGGGCAAAAGGGGTGGATTTAATACCTTTAGAGACAGGGAAAATTATGACAGAGGTTACTCTAGCCTGCTTAAAAGAGATTTTGGGGCAAAAACTCAGAAT
TRN  10010101100011011
NAM  Q6P4W2_XENTR/545-576
ASQ  GTNVQSGFRAGAQNGTYQNGYAS---QQNGYSAPP
DSQ  GGCACCAATGTTCAGAGTGGGTTCCGGGCAGGAGCACAGAACGGCACATACCAGAATGGCTACGCCAGC---------CAGCAGAATGGCTACAGTGCACCTCCA
TRN  11111111111111111
NAM  Q9W744_CHICK/534-564
ASQ  AAGMQAGFRAGNPAGAYQNGYD----QQYGSNIAN
DSQ  GCTGCAGGCATGCAAGCTGGCTTCAGGGCTGGTAACCCTGCAGGAGCTTACCAGAATGGTTATGAT------------CAGCAGTATGGAAGTAACATTGCAAAT
TRN  10110101110011011
NAM  Q28465_MACEU/165-193
ASQ  SAGIQTSFRTGNPTGTYQNGY------TVHSNMEI
DSQ  TCTGCTGGTATACAGACTAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAATGGTTAT------------------ACAGTACACAGCAATATGGAAATA
TRN  10010101110011011
NAM  DDX5_HUMAN/551-583
ASQ  SAGIQTSFRTGNPTGTYQNGYDS--TQQYGSNVPN
DSQ  TCTGCTGGTATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAATGGTTATGATAGC------ACTCAGCAATACGGAAGTAATGTTCCAAAT
TRN  10010101110011011
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