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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF07022 - Phage_CI_repr)
FAM  PF07022
PID  Phage_CI_repr
DES  Bacteriophage CI repressor protein
IPR  IPR010744
ANO  8
ALN  202
AID  0.331478
APH  ((YR7I_ECOLI/13-191:0.35283,Q8Z373_SALTI/2-180:0.36186):0.11515,Q8FJJ7_ECOL6/122-300:0.46176,(((RPC1_BPHP1/2-184:0.93592,(Q8D634_VIBVU/11-195:0.31671,Q9XJF9_9CAUD/9-208:1.02173):0.56229):0.13657,RPC1_BP186/5-184:0.73564):0.17351,Q8XF97_SALTI/7-203:0.66561):0.13974);
ATP  ((YR7I_ECOLI/13-191,Q8Z373_SALTI/2-180),Q8FJJ7_ECOL6/122-300,(((RPC1_BPHP1/2-184,(Q8D634_VIBVU/11-195,Q9XJF9_9CAUD/9-208)),RPC1_BP186/5-184),Q8XF97_SALTI/7-203));
ATL  5.97932
DNO  8
DLN  606
DID  0.443615
DPH  (YR7I_ECOLI/13-191:0.30514,(Q8FJJ7_ECOL6/122-300:0.37404,Q8Z373_SALTI/2-180:0.30389):0.09791,((RPC1_BPHP1/2-184:0.55015,RPC1_BP186/5-184:0.50702):0.12466,(Q8XF97_SALTI/7-203:0.37226,(Q8D634_VIBVU/11-195:0.40944,Q9XJF9_9CAUD/9-208:0.52694):0.37617):0.12682):0.09523);
DTP  (YR7I_ECOLI/13-191,(Q8FJJ7_ECOL6/122-300,Q8Z373_SALTI/2-180),((RPC1_BPHP1/2-184,RPC1_BP186/5-184),(Q8XF97_SALTI/7-203,(Q8D634_VIBVU/11-195,Q9XJF9_9CAUD/9-208))));
DTL  4.16967
RID  0.331478
RPH  ((YR7I_ECOLI/13-191:0.35283,Q8Z373_SALTI/2-180:0.36186):0.11515,Q8FJJ7_ECOL6/122-300:0.46176,(((RPC1_BPHP1/2-184:0.93592,(Q8D634_VIBVU/11-195:0.31671,Q9XJF9_9CAUD/9-208:1.02173):0.56229):0.13657,RPC1_BP186/5-184:0.73564):0.17351,Q8XF97_SALTI/7-203:0.66561):0.13974);
RTP  ((YR7I_ECOLI/13-191,Q8Z373_SALTI/2-180),Q8FJJ7_ECOL6/122-300,(((RPC1_BPHP1/2-184,(Q8D634_VIBVU/11-195,Q9XJF9_9CAUD/9-208)),RPC1_BP186/5-184),Q8XF97_SALTI/7-203));
RTL  5.97932
LNK  Q8D634_VIBVU/11-195:Q8D634:AE016810
LNK  Q8FJJ7_ECOL6/122-300:Q8FJJ7:AE016758
LNK  Q8XF97_SALTI/7-203:Q8XF97:AE016848
LNK  Q8Z373_SALTI/2-180:Q8Z373:AL627279
LNK  Q9XJF9_9CAUD/9-208:Q9XJF9:AF125163
LNK  RPC1_BP186/5-184:P08707:U32222
LNK  RPC1_BPHP1/2-184:P51704:U24159
LNK  YR7I_ECOLI/13-191:P21323:M55249
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9XJF9_9CAUD/9-208
ASQ  FDYLKGDAFTSKLKVITKCKDFFELGALLNIPKATFSTWNTHDRTSHELMVRLHLALGIPIEELALKPEDLKRFQPRVSEPKKSYQFEIAKNPQHETVILKSFCLTNGQLLETGELPYPVRRMNSFNL--KSGSTIEVETNEALYLVDNDSRDAVSGNYLIDIDGRLSVNHIQRLPGKKLAIAFGESTIEVSEHDIKVLGRV
DSQ  TTTGACTATTTGAAGGGTGACGCCTTCACATCGAAACTTAAAGTGATAACAAAATGTAAAGATTTCTTTGAGTTAGGTGCTCTTTTGAATATCCCAAAGGCAACTTTCAGCACTTGGAACACTCACGATAGAACGTCACATGAATTGATGGTGAGACTTCATTTGGCTCTTGGCATTCCTATTGAAGAGTTAGCCCTCAAGCCTGAGGATTTAAAAAGATTTCAACCGCGAGTTTCTGAACCTAAAAAAAGCTATCAATTCGAGATAGCAAAGAATCCCCAGCATGAAACCGTCATTCTCAAATCGTTCTGCCTGACAAACGGTCAGCTTCTTGAAACTGGCGAGCTCCCTTATCCCGTTCGCCGGATGAATAGCTTTAACCTG------AAATCTGGCAGCACGATTGAAGTTGAAACCAATGAGGCTCTTTATCTGGTGGATAACGATTCGCGTGATGCGGTTTCCGGTAACTACTTGATTGATATTGATGGCCGTTTATCGGTTAACCATATTCAGCGTTTACCCGGCAAAAAGCTGGCGATTGCGTTTGGTGAAAGCACGATTGAAGTATCAGAACACGACATTAAAGTGCTTGGCCGTGTC
TRN  10010101100011000
NAM  Q8D634_VIBVU/11-195
ASQ  FEYQGGKHVTERLCKALDAKNLSELSSILNIPTSTMSTWHKRELCPFEVVIRAHMYTGVSVRWLTLGEGEPFPNRTERTE-------------SNLLFEIDSHKVLNGELVSHEVLIFDKTILDDA----SVTNIMAIRDGEKTYIIDKETHQAVSGTYLVDMDGLLSLNEIQRLPGKKLAISFNGSTLTVEEDEVKVVGRV
DSQ  TTTGAATATCAAGGTGGAAAGCATGTCACAGAAAGATTGTGTAAGGCACTGGATGCAAAGAACTTAAGTGAGCTTTCGAGCATCCTAAATATACCTACTTCAACAATGTCTACATGGCATAAGCGCGAGCTATGTCCTTTCGAAGTAGTGATTAGAGCTCATATGTATACAGGCGTGTCGGTACGTTGGTTGACGCTTGGTGAAGGTGAACCCTTCCCAAATCGAACGGAGCGAACTGAA---------------------------------------TCTAACCTCCTTTTCGAAATCGACTCGCACAAAGTTCTCAATGGCGAGCTAGTTTCCCATGAAGTTCTCATTTTCGACAAAACCATATTAGATGACGCT------------TCAGTCACTAACATTATGGCAATTCGCGATGGCGAAAAGACTTACATCATTGATAAAGAAACACATCAAGCTGTAAGCGGAACTTATCTAGTCGATATGGACGGCCTTCTATCGCTGAACGAGATCCAGCGTTTACCAGGTAAGAAACTGGCGATTAGCTTTAATGGATCAACTCTTACAGTTGAAGAGGATGAGGTTAAGGTTGTTGGTAGGGTT
TRN  10010101100011000
NAM  Q8Z373_SALTI/2-180
ASQ  NLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSG------------------NTNTMEVAKYVLSDGALREDGFYIFDKGFLPS-----TFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFVEGGNRAFECKIEDIEIIGKI
DSQ  AATTTGGAGAAAGGCGGACGAGGCGCTATAGAGCGCATGGTAGAAGCTTATGGATTCAAAACTCGACAGGCGTTGTGCGATCATTTAGGAATCTCTAAAAGTACACTCGCCACACGCTACATGCGTGACTCATTCCCAGCAGAATGGGTAATCCAGTGCGCCCTTGAAACGGGCACCTCGCTTAATTGGCTCACAACCGGACATGGTTCAAAGCAAACTTCAGGT------------------------------------------------------AATACAAATACTATGGAAGTTGCTAAATATGTATTATCTGATGGTGCCTTGCGTGAAGACGGTTTTTATATTTTTGATAAGGGATTTCTACCCTCT---------------ACGTTTAAAAAACCTTTTGTCATCACAGATAACAATTCTGAATTTATTTGTGATAAAGAATTTGATGATATACGTGATGGTAAATGGGTAATAAGTATTGATGGCGAAGTAACGATCCGTGACATTACTCGTTTACCCGGTGGAAGAATCTTCGTCGAGGGTGGAAACAGAGCCTTCGAATGTAAGATAGAAGACATTGAAATAATTGGTAAAATT
TRN  10010101110011000
NAM  YR7I_ECOLI/13-191
ASQ  NPNKGGKAAIERLVEAYGFTTRQALADHLEVSKSTLANRYLRDTFPADWIIQCALETGTSLKWLTTGQGLKQSSL------------------TVATEELPKFRLTAGKMIEDGSYVFDSSFLPA-----NLSSPIVIQDGLVTYICDQKFSEVLDGHWLINIDGTYSIRKITKLPKGMIKITTTENSFECAFSDIEVVACI
DSQ  AATCCCAATAAAGGTGGTAAGGCTGCGATTGAGCGATTAGTCGAAGCTTATGGCTTTACGACACGACAGGCTTTAGCTGATCACTTGGAAGTATCAAAAAGCACTCTGGCGAACAGGTATTTGCGGGATACGTTTCCTGCAGACTGGATAATCCAATGTGCTCTTGAAACAGGAACCTCACTGAAATGGTTAACCACCGGGCAAGGACTTAAGCAAAGCTCGCTG------------------------------------------------------ACAGTAGCCACAGAAGAGCTTCCCAAGTTTCGCCTTACCGCAGGCAAAATGATTGAAGATGGTTCATATGTATTCGATTCATCATTTCTTCCTGCA---------------AATCTTTCATCACCAATTGTTATTCAGGATGGGCTTGTCACATACATTTGTGATCAAAAATTTTCTGAAGTACTTGATGGACACTGGTTAATCAACATCGACGGAACCTATTCCATTCGAAAAATCACAAAGCTTCCAAAAGGTATGATTAAAATTACAACTACAGAGAATAGCTTTGAATGTGCATTTTCTGATATTGAAGTGGTTGCTTGTATA
TRN  10010101100011000
NAM  Q8FJJ7_ECOL6/122-300
ASQ  TINQNGKAAIERIVAAYGFKTRQALADHLGISKSTLANRYMRDTFPADWIIQCALETGISLDWLVTGKGSKSNDV------------------NTDVAKLLAYKLINGKLIDADYIHFDKSLIPH-----NLINPQVVIDSENVFVVDYGYKEISDGEWLVEIEGKINIRTLVRIPVGKVKVISTHADFICDIENIKLLAKC
DSQ  ACTATAAATCAAAACGGAAAAGCAGCAATAGAGCGAATCGTTGCAGCCTATGGATTTAAGACAAGACAAGCTTTAGCTGATCATTTGGGTATTTCAAAAAGCACACTAGCTAATCGTTATATGAGGGATACATTTCCAGCCGATTGGATTATCCAATGCGCACTTGAAACTGGTATATCACTAGATTGGCTCGTTACTGGAAAAGGCTCAAAATCGAACGATGTA------------------------------------------------------AATACTGATGTAGCAAAGTTATTAGCATATAAGCTAATAAATGGTAAGTTAATAGATGCGGACTATATCCACTTTGATAAATCTTTAATACCACAC---------------AACCTTATAAATCCGCAGGTTGTGATCGATAGCGAAAATGTTTTCGTAGTAGACTATGGATATAAAGAAATATCTGATGGTGAATGGTTAGTAGAAATTGAAGGCAAAATAAACATTAGAACATTGGTCCGCATACCCGTAGGAAAAGTTAAAGTAATATCTACTCATGCTGATTTCATATGTGACATTGAGAATATAAAACTTTTAGCAAAATGC
TRN  10010101110011000
NAM  Q8XF97_SALTI/7-203
ASQ  GNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDG-----DSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRA
DSQ  GGGAATGATAGTGGTGGGCGCGATGCGATTAACAGGCTTATTAAGGCTTACAATTTCAGCTCACGACAGCAGCTCTGCGAACATCTGGAAGTATCAAAAAGCACTATGGCTAACAGATACTTAAGGGATAGTTTCCCTGCTGAATGGGTAATTCAATGCGCTCTTGAAACAGGAATTTCCCTTCTATGGCTGGCTACGGGCCAAGGAGATATGTATGCGTGTGAGAACGAAGAAAGAAATCTCAAAAACGAAACCTCCGTCACGGTAAGACCACTTTCTAAAATTGTTGCTCCTAGCATCAAACATGTTGAACTGAAGAACGGTGAACTGCAGCCAAGTGATGAAATTCTTCTTGATAGCAGACTGCTCGATGGT---------------GACTCATCCAACTCTTTGTTTGTAAAAACAGCTACTGATAGCTTTGTTGTGGATACGTCTGTTAAACAAGTCAGTAATGGCTTCTGGTTAGTCGATATGGACGGAGTTAAAAGCATCGTCAAAATCGCTCGCGTTCCAGGCAACAAAATTGTAGTTCACCAAGATGAAACATCATTTGAATGCTCGGTCGACGACATTGAAGCTATCGGGCGTGCA
TRN  10010101100011000
NAM  RPC1_BP186/5-184
ASQ  SLGWSNVDVLDRICEAYGFSQKIQLANHFDIASSSLSNRYTRGAISYDFAAHCALETGANLQWLLTGEGEAFVNNRE----------------SSDAKRIEGFTLSEEILKSDKQLSVDAQFFTK-----PLTDGMAIRSEGKIYFVDKQ-ASLSDGLWLVDIEGAISIRELTKLPGRKLHVAGGKVPFECGIDDIKTLGRV
DSQ  TCTTTAGGATGGAGCAACGTGGATGTACTTGACCGCATCTGCGAGGCGTACGGATTTTCGCAGAAAATTCAATTAGCTAACCACTTCGATATCGCGTCCAGCTCATTGTCAAACAGGTACACCCGAGGCGCTATCTCCTATGACTTTGCGGCTCACTGTGCCCTTGAAACAGGTGCTAATCTCCAGTGGTTACTTACCGGAGAAGGAGAAGCATTTGTAAATAACAGAGAA------------------------------------------------TCGAGCGACGCAAAAAGGATTGAGGGATTCACATTAAGTGAAGAAATCCTCAAATCCGATAAACAATTGAGTGTTGATGCCCAATTTTTCACAAAA---------------CCGCTCACAGATGGGATGGCTATCCGTTCCGAGGGGAAAATTTATTTTGTGGACAAGCAA---GCATCATTGTCTGACGGCTTATGGCTAGTCGACATTGAGGGAGCAATAAGCATTCGAGAGTTAACAAAACTACCGGGTAGAAAACTACATGTTGCAGGCGGGAAGGTTCCTTTCGAATGCGGCATTGATGATATTAAAACGTTGGGGCGTGTG
TRN  10010101110011000
NAM  RPC1_BPHP1/2-184
ASQ  KEFIGGKDVISRIMEAYGFANRRLLAEHLGMPHSTFGTWAKRGFFPAELVIRCVSETGARLDYVAYGNEPIFDN-------------------SDDLKYFHTIKLESGKSFIVENKPFLLPYLPNLDSRESYDKVFRIDEDNHTYFATSDYGNLVDGEYFVIVENSHLIRYITVLPAGKIRVDGGKFSFECELSDIDVVGKV
DSQ  AAAGAATTTATCGGTGGCAAGGATGTTATTTCTCGCATCATGGAAGCGTATGGTTTTGCGAATAGAAGATTGTTAGCCGAACATCTTGGAATGCCTCACAGTACCTTTGGCACCTGGGCTAAACGCGGTTTTTTTCCTGCTGAATTAGTCATTCGCTGCGTGTCAGAAACGGGCGCAAGATTGGATTATGTGGCCTATGGAAATGAGCCGATTTTTGATAAT---------------------------------------------------------TCAGACGATCTGAAATATTTTCATACAATAAAGCTAGAAAGCGGAAAATCTTTCATAGTAGAAAATAAACCCTTTCTTTTGCCTTACTTACCGAATTTAGACAGCCGTGAAAGTTATGACAAAGTGTTTCGTATTGATGAAGACAATCACACCTACTTTGCGACTAGCGATTACGGCAATTTAGTGGATGGCGAATACTTCGTCATCGTCGAAAACTCCCATCTTATCCGTTATATCACTGTGTTACCTGCAGGGAAAATCCGTGTAGACGGCGGCAAATTCAGTTTTGAATGTGAATTGAGTGATATTGATGTGGTGGGGAAGGTG
TRN  10010101100011000
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