EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF07012 - Curlin_rpt)
FAM  PF07012
PID  Curlin_rpt
DES  Curlin associated repeat
IPR  IPR009742
ANO  22
ALN  42
AID  0.330163
APH  (((((((Q8EIH4_SHEON/314-347:0.84342,((Q8EIH4_SHEON/125-158:0.58281,Q8EIH4_SHEON/81-114:0.42749):0.27603,Q8EIH4_SHEON/358-391:0.07513):0.19310):0.13133,Q8EIH4_SHEON/220-254:0.50169):0.27141,Q8EIH4_SHEON/266-303:0.34802):0.15746,(Q8EIH3_SHEON/42-75:0.67730,(((Q8U6N9_AGRT5/78-111:0.52926,Q88HG0_PSEPK/69-102:1.01369):0.20423,CSGB_SALTY/97-130:0.55138):0.00000,(((Q89JI5_BRAJA/87-120:0.31073,(Q89JI4_BRAJA/84-118:0.44505,Q8EIH3_SHEON/86-119:0.76388):0.30391):0.33278,Q89JI6_BRAJA/86-119:0.28422):0.41106,(O33801_SALTY/52-86:0.29447,Q8CW64_ECOL6/62-95:0.12470):0.76410):0.08883):0.25100):0.28565):0.00000,(Q8EIH4_SHEON/169-208:0.48620,Q8EIH4_SHEON/459-492:0.31841):0.27404):0.18739,(Q8CW63_ECOL6/86-120:0.27245,O33802_SALTY/85-119:0.25041):0.51828):0.60511,O33802_SALTY/40-74:0.22306,CSGA_ECOLI/40-74:0.18949);
ATP  (((((((Q8EIH4_SHEON/314-347,((Q8EIH4_SHEON/125-158,Q8EIH4_SHEON/81-114),Q8EIH4_SHEON/358-391)),Q8EIH4_SHEON/220-254),Q8EIH4_SHEON/266-303),(Q8EIH3_SHEON/42-75,(((Q8U6N9_AGRT5/78-111,Q88HG0_PSEPK/69-102),CSGB_SALTY/97-130),(((Q89JI5_BRAJA/87-120,(Q89JI4_BRAJA/84-118,Q8EIH3_SHEON/86-119)),Q89JI6_BRAJA/86-119),(O33801_SALTY/52-86,Q8CW64_ECOL6/62-95))))),(Q8EIH4_SHEON/169-208,Q8EIH4_SHEON/459-492)),(Q8CW63_ECOL6/86-120,O33802_SALTY/85-119)),O33802_SALTY/40-74,CSGA_ECOLI/40-74);
ATL  14.9488
DNO  22
DLN  126
DID  0.448023
DPH  ((Q8U6N9_AGRT5/78-111:0.29252,((Q88HG0_PSEPK/69-102:0.44848,Q8EIH3_SHEON/42-75:0.47340):0.13662,(((Q8EIH3_SHEON/86-119:0.30077,(Q8CW64_ECOL6/62-95:0.06040,O33801_SALTY/52-86:0.33341):0.36470):0.38288,CSGB_SALTY/97-130:0.22736):0.19658,((CSGA_ECOLI/40-74:0.10305,O33802_SALTY/40-74:0.16880):0.58669,(((((((Q8EIH4_SHEON/81-114:0.39247,Q8EIH4_SHEON/125-158:0.37924):0.07419,Q8EIH4_SHEON/358-391:0.12801):0.13537,Q8EIH4_SHEON/220-254:0.21072):0.01805,Q8EIH4_SHEON/314-347:0.51842):0.14514,(Q8EIH4_SHEON/169-208:0.16582,Q8EIH4_SHEON/459-492:0.40280):0.09957):0.05553,Q8EIH4_SHEON/266-303:0.22283):0.08349,(O33802_SALTY/85-119:0.17549,Q8CW63_ECOL6/86-120:0.23390):0.31361):0.21256):0.00000):0.17044):0.10094):0.19444,(Q89JI4_BRAJA/84-118:0.36154,Q89JI5_BRAJA/87-120:0.23715):0.18030,Q89JI6_BRAJA/86-119:0.15845);
DTP  ((Q8U6N9_AGRT5/78-111,((Q88HG0_PSEPK/69-102,Q8EIH3_SHEON/42-75),(((Q8EIH3_SHEON/86-119,(Q8CW64_ECOL6/62-95,O33801_SALTY/52-86)),CSGB_SALTY/97-130),((CSGA_ECOLI/40-74,O33802_SALTY/40-74),(((((((Q8EIH4_SHEON/81-114,Q8EIH4_SHEON/125-158),Q8EIH4_SHEON/358-391),Q8EIH4_SHEON/220-254),Q8EIH4_SHEON/314-347),(Q8EIH4_SHEON/169-208,Q8EIH4_SHEON/459-492)),Q8EIH4_SHEON/266-303),(O33802_SALTY/85-119,Q8CW63_ECOL6/86-120)))))),(Q89JI4_BRAJA/84-118,Q89JI5_BRAJA/87-120),Q89JI6_BRAJA/86-119);
DTL  9.44613
RID  0.330163
RPH  (((((((Q8EIH4_SHEON/314-347:0.84342,((Q8EIH4_SHEON/125-158:0.58281,Q8EIH4_SHEON/81-114:0.42749):0.27603,Q8EIH4_SHEON/358-391:0.07513):0.19310):0.13133,Q8EIH4_SHEON/220-254:0.50169):0.27141,Q8EIH4_SHEON/266-303:0.34802):0.15746,(Q8EIH3_SHEON/42-75:0.67730,(((Q8U6N9_AGRT5/78-111:0.52926,Q88HG0_PSEPK/69-102:1.01369):0.20423,CSGB_SALTY/97-130:0.55138):0.00000,(((Q89JI5_BRAJA/87-120:0.31073,(Q89JI4_BRAJA/84-118:0.44505,Q8EIH3_SHEON/86-119:0.76388):0.30391):0.33278,Q89JI6_BRAJA/86-119:0.28422):0.41106,(O33801_SALTY/52-86:0.29447,Q8CW64_ECOL6/62-95:0.12470):0.76410):0.08883):0.25100):0.28565):0.00000,(Q8EIH4_SHEON/169-208:0.48620,Q8EIH4_SHEON/459-492:0.31841):0.27404):0.18739,(Q8CW63_ECOL6/86-120:0.27245,O33802_SALTY/85-119:0.25041):0.51828):0.60511,O33802_SALTY/40-74:0.22306,CSGA_ECOLI/40-74:0.18949);
RTP  (((((((Q8EIH4_SHEON/314-347,((Q8EIH4_SHEON/125-158,Q8EIH4_SHEON/81-114),Q8EIH4_SHEON/358-391)),Q8EIH4_SHEON/220-254),Q8EIH4_SHEON/266-303),(Q8EIH3_SHEON/42-75,(((Q8U6N9_AGRT5/78-111,Q88HG0_PSEPK/69-102),CSGB_SALTY/97-130),(((Q89JI5_BRAJA/87-120,(Q89JI4_BRAJA/84-118,Q8EIH3_SHEON/86-119)),Q89JI6_BRAJA/86-119),(O33801_SALTY/52-86,Q8CW64_ECOL6/62-95))))),(Q8EIH4_SHEON/169-208,Q8EIH4_SHEON/459-492)),(Q8CW63_ECOL6/86-120,O33802_SALTY/85-119)),O33802_SALTY/40-74,CSGA_ECOLI/40-74);
RTL  14.9488
LNK  CSGA_ECOLI/40-74:P28307:L04979
LNK  CSGB_SALTY/97-130:P55226:AJ002301
LNK  O33801_SALTY/52-86:O33801:AJ000514
LNK  O33802_SALTY/40-74:O33802:AJ000514
LNK  O33802_SALTY/85-119:O33802:AJ000514
LNK  Q88HG0_PSEPK/69-102:Q88HG0:AE016786
LNK  Q89JI4_BRAJA/84-118:Q89JI4:BA000040
LNK  Q89JI5_BRAJA/87-120:Q89JI5:BA000040
LNK  Q89JI6_BRAJA/86-119:Q89JI6:BA000040
LNK  Q8CW63_ECOL6/86-120:Q8CW63:AE016759
LNK  Q8CW64_ECOL6/62-95:Q8CW64:AE016759
LNK  Q8EIH3_SHEON/42-75:Q8EIH3:AE015532
LNK  Q8EIH3_SHEON/86-119:Q8EIH3:AE015532
LNK  Q8EIH4_SHEON/125-158:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/169-208:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/220-254:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/266-303:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/314-347:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/358-391:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/459-492:Q8EIH4:AE015532
LNK  Q8EIH4_SHEON/81-114:Q8EIH4:AE015532
LNK  Q8U6N9_AGRT5/78-111:Q8U6N9:AE009405
AMK  xxxxxxxxx.xxxxxx......xxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q89JI6_BRAJA/86-119
ASQ  GTRNYANVI.QMGGTT......NAAVGQS-GLSNTADITQIG
DSQ  GGCACGCGCAACTATGCCAACGTGATC...CAGATGGGCGGCACCACC..................AACGCGGCGGTCGGTCAGTCC---GGCCTCAGCAACACCGCCGACATCACCCAGATCGGC
TRN  11011111111111111
NAM  Q89JI5_BRAJA/87-120
ASQ  GTNNATGVL.QFGGTN......SASVGQA-GMNNFAFVGQTG
DSQ  GGCACCAACAATGCCACGGGCGTCCTC...CAATTCGGCGGGACGAAT..................TCGGCGTCGGTCGGGCAGGCC---GGGATGAACAATTTCGCCTTCGTCGGCCAGACCGGC
TRN  11011111111111111
NAM  Q89JI4_BRAJA/84-118
ASQ  ATASNTALTgQVGGSN......SSLIGQI-GANNTAGVGQLG
DSQ  GCGACGGCCTCCAACACGGCGCTGACCggtCAGGTCGGCGGCTCCAAT..................TCGAGCCTGATCGGCCAGATC---GGCGCGAACAATACGGCCGGCGTCGGGCAGCTCGGC
TRN  11011111101111111
NAM  Q8EIH3_SHEON/86-119
ASQ  GTNNEVQLL.QVGAQN......KASITQI-GNDNLVQLNQLG
DSQ  GGTACCAATAATGAAGTCCAACTACTG...CAAGTCGGCGCTCAAAAT..................AAGGCATCAATTACCCAGATT---GGCAATGACAACCTGGTGCAATTGAACCAGCTAGGA
TRN  11011111101111101
NAM  Q8CW64_ECOL6/62-95
ASQ  GTNNSAQLR.QGGSKL......LTVVAQE-GSSNRAKIDQTG
DSQ  GGGACTAATAATAGTGCTCAGTTACGG...CAGGGAGGCTCAAAACTT..................TTGACGGTTGTTGCGCAAGAA---GGTAGTAGCAACCGGGCAAAGATTGATCAGACAGGA
TRN  11011101111011000
NAM  O33801_SALTY/52-86
ASQ  GTDNSARVR.HEGSKL......LSVISQERGGNNRAKVDQAG
DSQ  GGCACGGATAATAGTGCCAGAGTACGC...CATGAAGGATCAAAACTA..................TTGTCCGTTATTTCACAAGAACGAGGAGGAAATAATCGGGCGAAAGTCGACCAGGCAGGG
TRN  10010101110011001
NAM  Q8U6N9_AGRT5/78-111
ASQ  GHDNYGSTT.QNGNRN......VAGIGQF-GSNHTTILTQDG
DSQ  GGGCATGACAATTACGGTTCCACCACC...CAGAACGGCAACCGCAAC..................GTGGCCGGCATCGGCCAGTTC---GGCTCCAACCACACCACCATCCTGACCCAGGACGGC
TRN  11011111101111111
NAM  Q88HG0_PSEPK/69-102
ASQ  GQALLGRIV.QSGGAQ......EAYILQE-GSDLMAIISQQG
DSQ  GGTCAGGCCCTTCTGGGCCGTATCGTC...CAGTCCGGCGGTGCCCAG..................GAAGCGTACATCTTGCAGGAA---GGCAGTGACCTGATGGCCATCATCAGCCAACAGGGA
TRN  11011111101111111
NAM  CSGB_SALTY/97-130
ASQ  GNANDASIS.QSAYGN......SAAIIQK-GSGNKANITQYG
DSQ  GGCAATGCCAACGATGCCAGTATATCG...CAAAGCGCTTACGGTAAT..................AGTGCGGCTATTATCCAGAAA---GGTTCTGGAAATAAGGCCAATATTACCCAGTACGGT
TRN  10010101110011011
NAM  Q8EIH4_SHEON/459-492
ASQ  GDNNSLMIT.QTGNDN......LVLGSQA-GNNNSISVTQSG
DSQ  GGTGATAACAATAGCCTAATGATTACT...CAAACAGGTAATGACAAC..................TTAGTATTAGGTTCTCAAGCG---GGCAACAACAACAGTATCAGCGTCACTCAAAGCGGT
TRN  11011111111111110
NAM  Q8EIH4_SHEON/169-208
ASQ  GDNNDGDIK.QYGNNNqagliaLDLSANV-GNNNDVSVEQIG
DSQ  GGTGATAACAACGACGGCGATATCAAA...CAATACGGTAACAACAACcaagcgggtttaattgctCTCGATCTAAGTGCCAACGTG---GGTAATAACAACGATGTCTCCGTCGAACAAATCGGT
TRN  11011101111011010
NAM  Q8EIH4_SHEON/314-347
ASQ  GDSNDVDLK.QRGDAN......FATFGAY-GTDNDFDLSSKG
DSQ  GGTGATAGCAACGACGTTGACTTAAAA...CAACGCGGTGATGCCAAC..................TTCGCAACCTTTGGCGCTTAC---GGCACAGATAACGATTTCGATTTATCTTCTAAAGGT
TRN  11111101111011010
NAM  Q8EIH4_SHEON/266-303
ASQ  GDDNTVDIT.QDGDSNtvg...DSLIADIQGDDNDITIKQKG
DSQ  GGTGATGATAACACTGTCGATATCACT...CAAGACGGCGATAGCAATactgtgggt.........GATTCTTTAATTGCGGATATTCAAGGTGACGATAACGATATCACCATCAAGCAAAAAGGC
TRN  11111101111011010
NAM  Q8EIH4_SHEON/358-391
ASQ  GEDNSIEIS.QEGDAN......FAYVDAT-GNDNEVNVEQDG
DSQ  GGCGAAGACAACAGCATTGAAATCAGC...CAAGAAGGTGATGCGAAC..................TTTGCCTACGTCGATGCCACT---GGTAACGACAACGAAGTCAATGTAGAGCAAGATGGC
TRN  11111111111111111
NAM  Q8EIH4_SHEON/81-114
ASQ  GDANEVTVS.QQTDWH......VAAVDVT-GNNNEAEVTQDG
DSQ  GGCGATGCCAACGAAGTGACGGTTAGC...CAACAAACAGACTGGCAT..................GTTGCCGCTGTTGATGTGACT---GGTAATAACAACGAAGCTGAAGTGACTCAAGACGGC
TRN  11111111111111111
NAM  Q8EIH4_SHEON/125-158
ASQ  GNDNLVSVN.QLGELN......ESYVEIT-GNENSAFVEQEG
DSQ  GGTAACGACAACCTCGTTTCTGTTAAC...CAATTAGGTGAGCTGAAC..................GAAAGCTACGTTGAAATTACT---GGTAATGAAAACAGTGCATTTGTTGAACAAGAAGGT
TRN  11011111101111110
NAM  Q8EIH3_SHEON/42-75
ASQ  GRDNLIDLV.QQGTAN......QGIVFQS-GSDNSAYVTQAG
DSQ  GGACGCGATAATCTTATCGACCTCGTG...CAGCAAGGAACTGCAAAC..................CAAGGGATAGTGTTCCAATCA---GGCAGCGATAACAGCGCCTACGTGACACAAGCGGGT
TRN  10010111110111001
NAM  Q8EIH4_SHEON/220-254
ASQ  GNDNSVDIY.QKGDNH......TGFVYALAGSENDISMEQEG
DSQ  GGTAACGACAACAGCGTTGACATCTAC...CAAAAAGGTGACAACCAC..................ACTGGTTTCGTTTACGCCTTGGCTGGTAGTGAAAACGATATCAGCATGGAACAAGAAGGC
TRN  11111101111011011
NAM  CSGA_ECOLI/40-74
ASQ  GPNSELNIY.QYGGGN......SALALQTDARNSDLTITQHG
DSQ  GGCCCAAATTCTGAGCTGAACATTTAC...CAGTACGGTGGCGGTAAC..................TCTGCACTTGCTCTGCAAACTGATGCCCGTAACTCTGACTTGACTATTACCCAGCATGGC
TRN  11011111101111111
NAM  O33802_SALTY/40-74
ASQ  GPDSTLSIY.QYGSAN......AALALQSDARKSETTITQSG
DSQ  GGCCCGGATTCCACGTTGAGCATTTAT...CAGTACGGTTCCGCTAAC..................GCTGCGCTTGCTCTGCAAAGCGATGCCCGTAAATCTGAAACGACCATTACCCAGAGCGGT
TRN  11011101101011011
NAM  O33802_SALTY/85-119
ASQ  ADNSTIELT.QNGFRN......NATIDQWNAKNSDITVGQYG
DSQ  GCGGATAACAGTACTATTGAACTGACT...CAGAATGGTTTCAGAAAC..................AATGCCACCATCGACCAGTGGAACGCTAAAAACTCCGATATTACTGTCGGTCAATACGGC
TRN  10010101100011011
NAM  Q8CW63_ECOL6/86-120
ASQ  SDDSSIDLT.QRGFGN......SATLDQWNGKDSTMTVKQFG
DSQ  TCTGATGACAGCTCAATCGATCTGACT...CAGCGTGGTTTCGGCAAC..................AGCGCTACTCTTGATCAGTGGAATGGTAAAGATTCTACTATGACTGTTAAACAGTTCGGT
TRN  11011101101011001
//