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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF06984 - MRP-L47)
FAM  PF06984
PID  MRP-L47
DES  Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
IPR  IPR010729
ANO  9
ALN  101
AID  0.398997
APH  ((((O01437_CAEEL/63-152:0.35734,(O97270_PLAF7/18-109:0.87165,((RM04_YEAST/68-159:0.92084,P87232_SCHPO/38-127:0.33620):0.47333,Q94JQ7_ARATH/38-124:0.38254):0.13449):0.17236):0.16386,RM47_MOUSE/64-149:0.27201):0.05912,Q9XZY7_LEIMA/13-101:0.70874):0.34252,Q27370_DROME/14-98:0.36409,Q8T3V6_DROME/59-144:0.00040);
ATP  ((((O01437_CAEEL/63-152,(O97270_PLAF7/18-109,((RM04_YEAST/68-159,P87232_SCHPO/38-127),Q94JQ7_ARATH/38-124))),RM47_MOUSE/64-149),Q9XZY7_LEIMA/13-101),Q27370_DROME/14-98,Q8T3V6_DROME/59-144);
ATL  5.55949
DNO  9
DLN  303
DID  0.46464
DPH  (((((O97270_PLAF7/18-109:0.73974,O01437_CAEEL/63-152:0.31455):0.18059,RM47_MOUSE/64-149:0.19092):0.15442,Q9XZY7_LEIMA/13-101:0.42725):0.08922,((RM04_YEAST/68-159:0.56235,P87232_SCHPO/38-127:0.41701):0.25531,Q94JQ7_ARATH/38-124:0.32578):0.18899):0.18099,Q27370_DROME/14-98:0.21190,Q8T3V6_DROME/59-144:0.02023);
DTP  (((((O97270_PLAF7/18-109,O01437_CAEEL/63-152),RM47_MOUSE/64-149),Q9XZY7_LEIMA/13-101),((RM04_YEAST/68-159,P87232_SCHPO/38-127),Q94JQ7_ARATH/38-124)),Q27370_DROME/14-98,Q8T3V6_DROME/59-144);
DTL  4.25925
RID  0.398997
RPH  ((((O01437_CAEEL/63-152:0.35734,(O97270_PLAF7/18-109:0.87165,((RM04_YEAST/68-159:0.92084,P87232_SCHPO/38-127:0.33620):0.47333,Q94JQ7_ARATH/38-124:0.38254):0.13449):0.17236):0.16386,RM47_MOUSE/64-149:0.27201):0.05912,Q9XZY7_LEIMA/13-101:0.70874):0.34252,Q27370_DROME/14-98:0.36409,Q8T3V6_DROME/59-144:0.00040);
RTP  ((((O01437_CAEEL/63-152,(O97270_PLAF7/18-109,((RM04_YEAST/68-159,P87232_SCHPO/38-127),Q94JQ7_ARATH/38-124))),RM47_MOUSE/64-149),Q9XZY7_LEIMA/13-101),Q27370_DROME/14-98,Q8T3V6_DROME/59-144);
RTL  5.55949
LNK  O01437_CAEEL/63-152:O01437:U97016
LNK  O97270_PLAF7/18-109:O97270:AL034556
LNK  P87232_SCHPO/38-127:P87232:Z97052
LNK  Q27370_DROME/14-98:Q27370:X73219
LNK  Q8T3V6_DROME/59-144:Q8T3V6:AY089479
LNK  Q94JQ7_ARATH/38-124:Q94JQ7:AF375438
LNK  Q9XZY7_LEIMA/13-101:Q9XZY7:AL389894
LNK  RM04_YEAST/68-159:P36517:Z30582
LNK  RM47_MOUSE/64-149:Q8K2Y7:BC029173
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9XZY7_LEIMA/13-101
ASQ  LYEFVDGNFLNNKRP---------AIPG..-GAWPLESLRRKSLADLQQIWLSLLKERNMLSTIKEHYLRHQEELGAMPAPSRLKMVEESMENVKRVVKER
DSQ  CTGTACGAGTTCGTTGATGGCAACTTCCTCAACAACAAGCGGCCC---------------------------GCCATCCCGGGT......---GGGGCGTGGCCGCTGGAGAGCTTGCGCCGCAAGAGTCTTGCCGACCTGCAGCAGATATGGTTGTCCTTGCTGAAGGAGCGCAACATGCTGAGCACCATCAAGGAACACTACCTGAGGCATCAAGAGGAGCTTGGGGCGATGCCGGCGCCGTCGCGGCTGAAGATGGTGGAAGAGTCGATGGAAAATGTCAAGAGGGTCGTGAAGGAGCGC
TRN  10010101100011011
NAM  Q94JQ7_ARATH/38-124
ASQ  LEEFFEF-----DRS--QDEDKPV-VYG..-RGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQAQNMQ---FPNPERIPKVRRSMCRIKHVLTER
DSQ  CTCGAAGAGTTCTTTGAGTTC---------------GACAGAAGC------CAAGACGAAGATAAACCTGTT---GTCTATGGT......---CGAGGTTGGAAAGCTTCAGAGCTGCGTCTCAAGTCATGGGATGATCTTCAGAAGCTGTGGTACGTTCTTCTCAAAGAGAAAAACATGTTGATGACTCAGCGTCAGATGCTTCAGGCTCAGAACATGCAG---------TTTCCTAACCCTGAACGCATTCCAAAGGTGAGGAGATCAATGTGCCGCATTAAGCATGTGCTGACCGAGAGA
TRN  10010101100011001
NAM  O01437_CAEEL/63-152
ASQ  MKQFFDD-----EANFGKAELRPKHRPG..-RSWTAEELRLKSNSDLHKLWYVCLKERNMLITMKKAHTSRARN---MPNPERLDRVHETMDRIESVVHER
DSQ  ATGAAACAATTTTTCGATGAT---------------GAAGCGAATTTTGGAAAAGCAGAGCTCCGCCCGAAACATCGGCCGGGC......---AGATCGTGGACAGCAGAAGAACTGAGATTAAAAAGCAATTCAGATTTGCATAAGCTTTGGTATGTGTGCTTGAAGGAGCGAAATATGCTGATAACGATGAAAAAAGCGCACACTTCACGTGCCCGGAAC---------ATGCCAAACCCAGAGAGACTTGATCGTGTTCATGAGACAATGGATCGTATAGAATCAGTAGTTCACGAGCGA
TRN  10010101100011000
NAM  RM47_MOUSE/64-149
ASQ  LEEFFDD-----PKNW--GEEK-V-KSG..-ASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLP---MPSPERLEKVVDSMDNVDKVVQER
DSQ  CTGGAAGAATTTTTTGATGAC---------------CCAAAGAATTGG------GGGGAAGAAAAA---GTC---AAATCTGGA......---GCTTCATGGACCTGCCAGCAGCTGAGGAACAAAAGTAACGAAGACTTACATAAGCTTTGGTATGTCCTTCTGAAGGAAAGAAACATGCTTCTAACTCTGGAGCAGGAGGCCAAGCGACAGAGGTTGCCA---------ATGCCAAGTCCGGAGCGCTTAGAAAAGGTCGTTGATTCCATGGATAACGTAGATAAAGTTGTCCAGGAGAGG
TRN  10010101100011000
NAM  Q8T3V6_DROME/59-144
ASQ  LMEFFDD-----KKNW--SENE-V-KVG..-RAWRTEELRIKSNKELHQLWFVLLKERNMLLTMEHECNDKMEV---FPSPERIDKVKISMENLETVVRER
DSQ  CTTATGGAGTTCTTCGACGAC---------------AAGAAGAACTGG------AGCGAGAATGAG---GTG---AAGGTGGGC......---CGCGCCTGGCGGACGGAGGAGCTGCGTATCAAGTCCAACAAGGAGCTGCACCAGCTGTGGTTCGTGCTCCTCAAGGAGCGCAACATGCTGCTGACCATGGAGCACGAGTGCAATGACAAAATGGAAGTC---------TTCCCTAGTCCGGAGCGCATCGATAAGGTGAAAATCTCCATGGAAAACCTGGAGACAGTAGTGAGGGAGCGG
TRN  10010101100011011
NAM  Q27370_DROME/14-98
ASQ  LMEFFDD-----KKNW--SENE-V-KVGraGHGGAAYQVQQGAAPAVVR----APQGSNMLLTMEHECNDKMEV---FPSPERIDKVKISMENLETVVRER
DSQ  CTTATGGAGTTCTTCGACGAC---------------AAGAAGAACTGG------AGCGAGAATGAG---GTG---AAGGTGGGCcgcgctGGGCACGGAGGAGCTGCGTATCAAGTCCAACAAGGAGCTGCACCAGCTGTGGTTCGT------------GCTCCTCAAGGCAGCAACATGCTGCTGACCATGGAGCACGAGTGCAATGACAAAATGGAAGTC---------TTCCCTAGTCCGGAGCGCATCGATAAGGTGAAAATCTCCATGGAAAACCTGGAGACAGTAGTGAGGGAGCGG
TRN  10010101100011011
NAM  P87232_SCHPO/38-127
ASQ  LWNFFRD-----KQALPPPSEE-A-KFG..-RAWAAEELRWKSFNDLHGLWYNCLREKNLLFTQRAEMKRLQLT-IPKASNERVLAVNKTMAAIKFVLWER
DSQ  TTGTGGAATTTCTTTCGGGAC---------------AAGCAAGCCCTTCCACCACCATCGGAAGAG---GCT---AAATTCGGT......---AGAGCATGGGCTGCAGAAGAGCTTCGTTGGAAGTCTTTTAATGATCTACATGGACTTTGGTACAATTGTCTCCGAGAGAAGAACCTATTGTTCACACAAAGGGCTGAAATGAAACGCTTACAGTTGACT---ATTCCCAAAGCCTCAAATGAGCGTGTACTTGCAGTCAATAAAACCATGGCAGCTATCAAATTTGTCCTATGGGAACGC
TRN  10010101110011000
NAM  RM04_YEAST/68-159
ASQ  LWQFFSNKKFIRSADDLPPSSH------..IRPWSIPELRHKSFNDLHSLWYNCLREQNVL-ARENHLLKNIVGSTHDEFSELSNSIRTTMWQIRHVLNER
DSQ  CTGTGGCAGTTCTTCTCCAACAAGAAATTCATCAGGTCCGCCGACGACTTGCCGCCTTCCAGCCAT------------------......ATCAGACCCTGGAGCATCCCAGAGTTGAGGCACAAGTCCTTTAACGACTTGCATTCCCTTTGGTACAACTGCCTCAGGGAGCAAAATGTGCTT---GCTCGCGAAAACCATCTCTTGAAAAACATTGTTGGCTCCACGCATGACGAATTCAGTGAGCTCTCTAATTCTATCAGAACCACCATGTGGCAAATAAGACATGTACTTAACGAAAGA
TRN  10010101100011011
NAM  O97270_PLAF7/18-109
ASQ  IEELWENSFLDNNVDMKKIEYS---KTG..-DAWPCVLLRKKSFEDLHKLYYICLKEKNKLLGEQYFHLQNSTK---MLQHGRLKKVKLTMKRILTVLSRR
DSQ  ATTGAAGAATTATGGGAAAATAGTTTTCTTGATAATAATGTGGATATGAAGAAGATAGAATATAGT---------AAAACAGGA......---GATGCTTGGCCTTGTGTTTTATTAAGGAAGAAGAGTTTTGAAGATTTGCATAAATTATATTATATATGTTTAAAAGAAAAGAATAAATTATTAGGAGAACAATATTTTCATTTACAAAATAGTACAAAA---------ATGTTACAACATGGAAGATTAAAAAAAGTAAAATTAACAATGAAAAGAATTTTGACTGTTTTATCACGAAGA
TRN  10010101110011000
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