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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF06535 - RGM_N)
FAM  PF06535
PID  RGM_N
DES  Repulsive guidance molecule (RGM) N-terminus
IPR  IPR010536
ANO  2
ALN  224
AID  0.605405
APH  (RGMC_RAT/8-223:0.51063,RGMA_MOUSE/22-224:0.04791);
ATP  (RGMC_RAT/8-223,RGMA_MOUSE/22-224);
ATL  0.55854
DNO  2
DLN  672
DID  0.603419
DPH  (RGMC_RAT/8-223:0.44446,RGMA_MOUSE/22-224:0.12646);
DTP  (RGMC_RAT/8-223,RGMA_MOUSE/22-224);
DTL  0.57092
RID  0.605405
RPH  (RGMC_RAT/8-223:0.36907,RGMA_MOUSE/22-224:0.18947);
RTP  (RGMC_RAT/8-223,RGMA_MOUSE/22-224);
RTL  0.55854
LNK  RGMA_MOUSE/22-224:Q6PCX7:AJ557513
LNK  RGMC_RAT/8-223:Q8N7M5:AK098165
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  RGMC_RAT/8-223
ASQ  PSLRSPHGSPPTLSTLTLLLLLCG--QAHSQCKILRCNAEYVSFTLSLRGGGSPDTPRGGGRGGPASGGL---CRALRSYALCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSRQGPTASPPARGPALPGAGPAPL---TPDPCDYEARFSRLHGRTPGFLHCASFGDPHVRSFHNHFHTCRVQGAWPLLDNDFLFVQATSSPVASGANATTIRKITIIFKNM
DSQ  CCTAGTCTCCGGTCCCCCCATGGCAGTCCTCCAACTCTAAGCACCCTCACTCTCCTGCTGCTCCTCTGTGGA------CAGGCTCACTCCCAGTGCAAGATCCTCCGCTGCAATGCCGAGTACGTCTCGTTCACTCTGAGCCTTCGGGGAGGGGGCTCACCGGACACGCCACGTGGAGGCGGCCGTGGTGGGCCGGCCTCAGGTGGCTTG---------TGTCGCGCCCTGCGCTCCTACGCTCTCTGCACGCGGCGCACCGCCCGCACCTGCCGCGGGGACCTCGCTTTCCACTCCGCGGTGCATGGCATAGAGGACCTGATGATCCAGCACAACTGCTCACGCCAGGGTCCCACGGCCTCGCCCCCGGCCCGGGGTCCTGCCCTGCCCGGGGCCGGCCCAGCGCCCCTG---------ACCCCAGATCCCTGTGACTATGAAGCCCGGTTTTCCAGGCTGCACGGTCGAACCCCGGGTTTCTTGCATTGTGCTTCCTTTGGAGACCCCCATGTGCGCAGCTTCCACAATCACTTTCACACATGCCGCGTCCAAGGAGCTTGGCCCCTACTAGATAACGACTTCCTCTTTGTCCAAGCCACCAGCTCCCCGGTAGCATCGGGAGCCAACGCTACCACCATCCGGAAGATCACTATCATATTTAAAAACATG
TRN  10010101100011001
NAM  RGMA_MOUSE/22-224
ASQ  GAGRSALGLWPTLA-----FLLCSFPAAISPCKILKCNSEFWSATSS-------------GSHAPASDDVPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPRVR--TLPPAGDSQERSDSPEICHYEKSFHK-HSAAPNYTHCGLFGDPHLRTFTDHFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNF
DSQ  GGGGCAGGACGTTCAGCCCTGGGATTGTGGCCGACCCTCGCC---------------TTCCTTCTCTGCAGCTTCCCCGCAGCCATCTCCCCCTGCAAAATCCTCAAGTGCAACTCTGAGTTCTGGAGCGCCACGTCATCA---------------------------------------GGCAGCCACGCCCCTGCCTCCGACGACGTGCCGGAGTTCTGTGCAGCCCTGCGCACCTACGCCCTGTGCACTCGGCGGACAGCCCGCACCTGCCGGGGCGACCTGGCTTACCACTCGGCTGTCCATGGCATAGAGGACCTTATGAGCCAGCACAACTGCTCCAAGGACGGCCCCACCTCACAGCCGCGAGTGCGC------ACGCTCCCGCCAGCTGGGGACAGCCAGGAGCGCTCGGATAGCCCCGAGATCTGCCACTATGAGAAGAGTTTCCACAAG---CACTCAGCTGCCCCCAACTACACTCACTGCGGCCTCTTTGGGGACCCACACCTCAGGACTTTCACAGACCACTTCCAGACATGCAAGGTGCAAGGCGCCTGGCCTCTCATCGACAATAATTACCTGAACGTGCAAGTCACCAATACACCTGTGCTGCCGGGCTCCGCAGCTACCGCCACCAGCAAGCTCACCATCATCTTCAAGAACTTC
TRN  10010101100011001
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