pan•dit

PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF05843
PID  Suf
DES  Suppressor of forked protein (Suf)
IPR  IPR008847
ANO  6
ALN  326
AID  0.360301
APH  ((O96641_DROVI/376-654:0.26713,((RNA14_YEAST/413-669:1.01932,O14233_SCHPO/440-716:0.67058):0.41984,Q8GUP1_ARATH/333-632:0.60951):0.36599):0.06481,Q18907_CAEEL/363-651:0.51966,Q12996_HUMAN/375-649:0.24586);
ATP  ((O96641_DROVI/376-654,((RNA14_YEAST/413-669,O14233_SCHPO/440-716),Q8GUP1_ARATH/333-632)),Q18907_CAEEL/363-651,Q12996_HUMAN/375-649);
ATL  4.1827
DNO  6
DLN  978
DID  0.451575
DPH  ((((Q12996_HUMAN/375-649:0.25386,Q18907_CAEEL/363-651:0.39966):0.03853,O96641_DROVI/376-654:0.36269):0.19500,Q8GUP1_ARATH/333-632:0.44762):0.22219,RNA14_YEAST/413-669:0.71450,O14233_SCHPO/440-716:0.48953);
DTP  ((((Q12996_HUMAN/375-649,Q18907_CAEEL/363-651),O96641_DROVI/376-654),Q8GUP1_ARATH/333-632),RNA14_YEAST/413-669,O14233_SCHPO/440-716);
DTL  3.12358
RID  0.360301
RPH  ((O96641_DROVI/376-654:0.26713,((RNA14_YEAST/413-669:1.01932,O14233_SCHPO/440-716:0.67058):0.41984,Q8GUP1_ARATH/333-632:0.60951):0.36599):0.06481,Q18907_CAEEL/363-651:0.51966,Q12996_HUMAN/375-649:0.24586);
RTP  ((O96641_DROVI/376-654,((RNA14_YEAST/413-669,O14233_SCHPO/440-716),Q8GUP1_ARATH/333-632)),Q18907_CAEEL/363-651,Q12996_HUMAN/375-649);
RTL  4.1827
LNK  O14233_SCHPO/440-716:O14233:Z98533
LNK  O96641_DROVI/376-654:O96641:AF097830
LNK  Q12996_HUMAN/375-649:Q12996:U15782
LNK  Q18907_CAEEL/363-651:Q18907:L39893
LNK  Q8GUP1_ARATH/333-632:Q8GUP1:BT002320
LNK  RNA14_YEAST/413-669:P25298:M73461
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q8GUP1_ARATH/333-632
ASQ  SLAHIQYLRFLRRAEGVEAARKYFLDARKSPSC-TYHVYIAFATMAFCIDKEPKVAHNIFEEGLKLYMSEPVYILKYADFLTRLNDDRNIRALFERALST--LPVEDSAEVWKRFIQFEQTYGDLASILKVEQRMKEALSGKGE-EGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQELLVKNLNK-----------------KAGKTNLPHVPAAIGSVASSSKVVYPDTSQMVVQ-DPTKKSEFASSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVAFLANLP---IVDGPTPNVD-VVLSICLQSDFP
DSQ  TCTTTGGCACATATACAATACCTTCGTTTTCTCCGGAGGGCTGAGGGTGTTGAAGCTGCTCGCAAGTACTTTTTAGATGCTAGAAAATCTCCTAGCTGC---ACATATCATGTGTATATTGCTTTTGCTACCATGGCCTTTTGTATTGACAAGGAACCAAAGGTTGCACATAATATCTTTGAAGAGGGGTTGAAACTCTATATGAGTGAACCTGTTTACATCCTTAAGTATGCAGATTTCTTGACTAGATTGAATGATGATAGAAATATCAGAGCTCTATTTGAGCGGGCATTAAGCACG------TTACCAGTTGAAGACTCTGCTGAGGTCTGGAAAAGATTCATTCAGTTTGAGCAAACATATGGAGATCTTGCTAGTATTCTAAAGGTTGAGCAGAGAATGAAAGAAGCACTTTCTGGAAAAGGGGAA---GAGGGGTCTTCTCCTCCAGAGAGTTCACTTCAAGATGTTGTTTCTCGGTACAGTTACATGGATCTTTGGCCATGCACTTCTAACGACCTTGATCATTTAGCCAGACAAGAGTTGCTCGTGAAGAATCTGAATAAG---------------------------------------------------AAAGCAGGGAAAACAAATCTACCTCATGTTCCTGCGGCTATAGGTAGTGTAGCTTCTTCGTCAAAAGTTGTTTATCCAGATACATCTCAGATGGTTGTTCAA---GACCCGACAAAGAAATCAGAGTTTGCTAGTTCTGCAAACCCAGTGGCAGCTTCTGCTTCGAACACCTTCCCAAGTACTGTGACTGCAACTGCAACTCATGGATCAGCCAGCACATTTGACGAAATACCAAAGACTACTCCACCTGCATTGGTAGCATTTTTAGCTAACTTGCCT---------ATTGTGGACGGTCCAACACCCAATGTGGAT---GTTGTTCTGTCGATATGTTTGCAGAGCGACTTTCCA
TRN  10010101100011000
NAM  Q18907_CAEEL/363-651
ASQ  TLTYVQLMRFVRRSEGPNNARLVFKRAREDKRT-GYQVFVAAALLEYNCMKDKEVAIRVFKLGLKKYENEPEFGLAYADFLSNLNEDNNTRVVFERILTSSKLPADKSIRIWDRFLDFESCVGDLASILKVEKRRKTAYEEAQ----KDQTMNHSMLVIDRYKFMDLMPCSGEQLKLIGYNALKGTESIAGPSFVGSKNVPTH----GPQAASAIMGGAGGHADVARYGFPRPDISQMIP-FKPR--VNCTASFHPVPGGV---FP---------------------PPQSVAHLMSLLPPPTCFIGPFINVELLCNMINN-MQLP
DSQ  ACATTAACTTATGTGCAATTAATGAGATTTGTCAGAAGGTCTGAGGGACCTAATAACGCTCGACTGGTTTTCAAAAGGGCACGAGAGGATAAACGAACA---GGATATCAAGTATTTGTAGCTGCTGCATTGTTGGAATACAATTGTATGAAGGATAAAGAAGTTGCCATCCGAGTATTCAAATTAGGATTGAAGAAATATGAAAATGAGCCAGAATTCGGTCTGGCCTACGCCGATTTTTTGTCTAATCTGAATGAAGATAACAACACGAGAGTAGTTTTCGAAAGGATTTTGACATCGTCAAAGCTCCCCGCCGACAAGTCCATCCGGATTTGGGATCGATTTTTGGACTTTGAAAGCTGTGTTGGTGATCTTGCTTCTATTCTCAAGGTTGAAAAGAGGCGAAAAACGGCATACGAGGAAGCTCAA------------AAAGATCAGACAATGAACCATTCTATGCTTGTGATTGATAGATATAAGTTTATGGATCTAATGCCGTGCAGTGGAGAGCAACTGAAACTTATTGGATATAATGCACTGAAGGGTACGGAAAGCATCGCCGGACCATCATTCGTTGGTTCAAAGAATGTTCCAACTCAT------------GGACCACAAGCAGCCAGTGCAATTATGGGTGGAGCTGGTGGACACGCAGACGTGGCACGATACGGTTTCCCAAGACCCGACATATCACAAATGATTCCA---TTCAAACCACGA------GTCAATTGTACGGCATCGTTTCATCCGGTACCTGGAGGCGTA---------TTTCCA---------------------------------------------------------------CCACCACAATCAGTTGCACATCTCATGTCTCTTCTTCCTCCTCCAACTTGTTTTATTGGACCATTTATCAATGTGGAATTGTTGTGCAATATGATCAATAAT---ATGCAGCTTCCA
TRN  10010101100011000
NAM  Q12996_HUMAN/375-649
ASQ  TLVYIQYMKFARRAEGIKSGRMIFKKAREDTRT-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKE--EYEGK---ETAL--LVDRYKFMDLYPCSASELKALGYKDVSRAKLAA--------IIPDPV----VAPSIVPVL--KDEVD-RKPEYPKPDTQQMIP-FQPRHLAP--PGLHPVPGGV---FP---------------------VPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRR-CKIP
DSQ  ACCTTGGTATATATCCAATATATGAAATTTGCACGGAGAGCAGAAGGCATCAAATCTGGAAGAATGATATTTAAAAAAGCAAGAGAAGATACCAGAACC---CGCCACCATGTCTATGTTACTGCAGCACTCATGGAATATTACTGTAGTAAGGACAAATCTGTTGCCTTTAAGATTTTTGAGCTGGGGCTAAAAAAATATGGAGACATTCCAGAGTATGTCCTGGCCTATATTGACTATCTTTCTCACCTCAATGAGGACAATAATACCCGAGTTTTGTTTGAACGAGTTTTAACATCTGGAAGCCTTCCTCCTGAGAAGTCTGGAGAAATCTGGGCCCGATTTCTAGCATTTGAAAGTAATATTGGTGATCTAGCTAGTATACTCAAAGTGGAGAAAAGACGGTTTACAGCATTCAAAGAA------GAGTATGAAGGGAAA---------GAAACGGCTTTA------CTAGTAGATAGATACAAGTTCATGGATTTATATCCTTGCTCTGCAAGTGAATTAAAAGCACTTGGTTATAAGGATGTCTCCCGTGCTAAGCTAGCAGCT------------------------ATAATTCCGGACCCAGTT------------GTAGCTCCTTCTATAGTGCCTGTTCTG------AAAGATGAAGTGGAT---AGAAAACCAGAATACCCTAAACCAGACACTCAGCAGATGATTCCA---TTTCAGCCACGACATTTAGCACCT------CCAGGTTTACACCCTGTACCTGGTGGAGTG---------TTCCCA---------------------------------------------------------------GTCCCTCCTGCAGCTGTTGTTTTAATGAAACTTCTCCCTCCTCCTATCTGTTTCCAGGGTCCTTTTGTACAAGTGGATGAACTGATGGAAATTTTCCGAAGA---TGCAAGATACCA
TRN  10010101100011010
NAM  O96641_DROVI/376-654
ASQ  TLVYVQYMKFARRAEGIKSARGIFKKAREDVRS-RYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFENLKEYEGK---ETAQ--LVDRYKFLDLYPCTSTELKSIGYAENVGIILNK-------------VGGASGGANSHNNNNENETDGEATQPLPRPDFSQMIP-FKPRSCAH--PGAHPLAGGV---FP---------------------QPPALAALCAALPPPNSFRGPFVSVELLFDIFMR-LNLP
DSQ  ACGCTGGTATACGTGCAGTACATGAAGTTCGCTCGTCGCGCTGAGGGCATCAAGTCCGCGCGTGGCATTTTTAAGAAGGCGCGCGAGGATGTGCGTTCG---CGTTATCACATCTTTGTGGCGGCCGCTTTAATGGAGTATTACTGTTCCAAGGACAAGGAGATTGCATTTCGTATTTTCGAACTGGGCCTCAAGCGTTTCGGCGGCAGTCCCGAGTACGTCATGTGCTATATCGACTACCTCTCGCACTTGAACGAGGACAACAACACGCGTGTGCTCTTTGAGCGCGTCTTAAGTTCGGGCGGCCTCTCGCCGCACAAAAGCGTGGAGGTCTGGAATCGCTTCCTTGAGTTCGAGTCCAACATTGGCGACCTATCGAGCATTGTCAAAGTTGAGCGAAGGCGCAGTGCGGTCTTTGAAAATCTCAAAGAGTACGAGGGCAAG---------GAGACCGCACAG------CTAGTGGATCGCTACAAGTTCCTGGATCTATATCCCTGCACCAGCACCGAGCTCAAGTCTATTGGCTATGCCGAGAACGTGGGCATCATACTGAATAAG---------------------------------------GTGGGCGGCGCCAGCGGCGGTGCGAATAGTCACAACAATAACAACGAGAACGAGACGGATGGGGAGGCGACACAGCCGCTGCCACGTCCAGACTTCTCGCAGATGATACCG---TTTAAGCCGCGCTCATGCGCCCAT------CCGGGCGCCCATCCGCTGGCCGGCGGCGTC---------TTTCCA---------------------------------------------------------------CAGCCACCGGCACTGGCTGCACTTTGCGCCGCACTGCCGCCGCCGAATAGCTTTCGCGGTCCCTTTGTCAGCGTGGAACTGCTCTTTGACATCTTTATGCGT---CTCAACTTGCCA
TRN  10010101100011000
NAM  O14233_SCHPO/440-716
ASQ  SLAWCCLINAIRRTEGVKAARAIFTKARKAPYQ-SHEIYIASAMMEHHCSRDPVIASRIFELGMRHFGDVPAYVYKYLSYLIAINDETNARALFEKAIP--RIAADEAKPIYQKWLDYESNYGDLNAAIALSQRMAVVYP----------QESTQAIFLSRYGLKDDAEEEERETKEAEKIRELSVRLNG------GNGFPGHVHNNREDDEVSIA-------STSSKSNVEMEDTRLLP--ASLELANTQGASNP-PTSALPTVP-------------------VPLPSIITEFLDELPAPQVITGPRIQPTKLIDHIIK-SDIP
DSQ  AGTCTTGCTTGGTGTTGTTTAATAAATGCTATTAGGAGGACTGAAGGCGTGAAAGCAGCTAGAGCTATATTTACCAAAGCTCGAAAAGCACCATATCAG---TCTCATGAGATATATATAGCTAGCGCGATGATGGAACATCATTGTTCGAGGGATCCGGTTATTGCCTCTCGAATTTTTGAGTTGGGTATGAGACATTTTGGAGATGTTCCAGCCTATGTTTATAAATATTTGTCATACTTAATAGCTATAAACGATGAAACTAATGCTCGCGCGCTATTTGAGAAAGCCATCCCG------AGGATTGCAGCTGATGAAGCTAAACCCATATATCAAAAATGGCTTGACTATGAAAGTAATTATGGCGATTTGAATGCAGCTATAGCACTTAGTCAAAGAATGGCTGTTGTTTACCCT------------------------------CAAGAGTCCACACAAGCCATATTTTTATCGCGCTATGGCTTGAAGGATGATGCTGAGGAAGAAGAACGGGAAACAAAAGAAGCGGAAAAAATTAGAGAACTATCTGTTCGCTTAAATGGA------------------GGAAATGGATTCCCGGGCCATGTTCATAACAACAGGGAAGATGATGAAGTTTCTATAGCC---------------------TCTACCTCTTCTAAAAGTAACGTCGAAATGGAAGATACTCGTTTACTTCCT------GCGTCTTTGGAATTAGCAAACACTCAAGGAGCATCGAATCCA---CCTACTTCAGCACTTCCAACTGTTCCG---------------------------------------------------------GTACCGTTACCATCTATAATAACCGAATTTTTGGATGAACTCCCAGCTCCTCAAGTAATAACTGGTCCTCGAATCCAACCAACAAAACTTATCGATCATATTATTAAA---TCAGATATCCCT
TRN  10010101110011000
NAM  RNA14_YEAST/413-669
ASQ  TFVFCVYMNTMKRISGLSAARTVFGKCRKLKRILTHDVYVENAYLEFQNQNDYKTAFKVLELGLKYFQNDGVYINKYLDFLIFLNKDSQIKTLFETSVEKVQ-DLTQLKEIYKKMISYESKFGNLNNVYSLEKRFFERFP----------QENLIEVFTSRYQIQNSNLIKKLELTYM-YNEEEDSYFSS----------------------------GNGDGHHGSYNMSSSDRKRLME--ETGNNGNFSNKKFKRDSEL---------------------------PTEVLDLLSVIPKRQYFNTNLLDAQKLVNFLNDQVEIP
DSQ  ACATTCGTGTTTTGCGTGTATATGAATACGATGAAAAGAATATCAGGACTATCCGCAGCACGTACTGTATTTGGTAAATGTCGTAAACTGAAGCGTATATTAACACATGACGTCTACGTGGAAAATGCATATTTAGAATTTCAAAATCAAAACGATTATAAGACTGCTTTTAAGGTTTTAGAATTGGGTTTAAAATACTTCCAAAACGATGGAGTTTATATCAACAAATACTTAGATTTTTTAATATTTTTAAATAAGGATTCGCAGATCAAAACCTTATTTGAAACATCAGTGGAAAAAGTGCAA---GATTTAACCCAGCTGAAGGAAATATACAAGAAAATGATAAGTTATGAATCGAAATTCGGTAACTTAAACAACGTTTATTCTCTAGAGAAAAGATTTTTCGAACGGTTCCCC------------------------------CAAGAAAATTTGATTGAAGTTTTCACAAGTCGTTATCAAATTCAAAACTCCAACTTAATAAAGAAATTAGAGTTAACTTATATG---TATAATGAGGAAGAAGACAGTTACTTTTCTTCT------------------------------------------------------------------------------------GGAAACGGGGATGGCCATCATGGCTCTTACAATATGAGTTCGTCAGATAGAAAGAGACTAATGGAG------GAAACTGGAAACAATGGAAACTTCTCCAATAAGAAATTCAAAAGAGACTCAGAGCTT---------------------------------------------------------------------------------CCAACAGAGGTTCTTGATTTATTGAGCGTTATACCAAAACGTCAATATTTTAATACAAATTTACTCGATGCGCAGAAATTGGTCAATTTTTTAAATGATCAAGTAGAGATTCCA
TRN  10010101100011000
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