pandit
|
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
|
FAM PF05732
PID RepL
DES Firmicute plasmid replication protein (RepL)
IPR IPR008813
ANO 4
ALN 199
AID 0.356637
APH ((Q52051_BUTFI/9-206:0.39955,O50587_SELRU/6-169:0.44012):1.11933,REMA_STAEP/1-157:0.19593,Q06462_STAAU/1-154:0.46767);
ATP ((Q52051_BUTFI/9-206,O50587_SELRU/6-169),REMA_STAEP/1-157,Q06462_STAAU/1-154);
ATL 2.62255
DNO 4
DLN 597
DID 0.472547
DPH ((Q06462_STAAU/1-154:16.34761,REMA_STAEP/1-157:16.57153):33.92032,O50587_SELRU/6-169:16.27088,Q52051_BUTFI/9-206:22.26509);
DTP ((Q06462_STAAU/1-154,REMA_STAEP/1-157),O50587_SELRU/6-169,Q52051_BUTFI/9-206);
DTL 105.394
RID 0.356637
RPH ((Q52051_BUTFI/9-206:0.39955,O50587_SELRU/6-169:0.44012):1.11933,REMA_STAEP/1-157:0.19593,Q06462_STAAU/1-154:0.46767);
RTP ((Q52051_BUTFI/9-206,O50587_SELRU/6-169),REMA_STAEP/1-157,Q06462_STAAU/1-154);
RTL 2.62255
LNK O50587_SELRU/6-169:O50587:AB003193
LNK Q06462_STAAU/1-154:Q06462:X55798
LNK Q52051_BUTFI/9-206:Q52051:L31579
LNK REMA_STAEP/1-157:P06735:M12730
AMK xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM Q52051_BUTFI/9-206
ASQ HVTTKKVKAIGTETYINVATGEAEEFQVTKIEERDFNFTKVWIRNFVATLDLVGNQKTRLVYWIIDNLN-HNNQLICTNRLMAEETGISLATVSVTMKALQDANFLKKQANGVYVINPDILFKGTQKARLNILNQFSELGAEPQELSDEQKIQNITKTIAQLSKQLEALQSKSSVVDTEIEGQYTLLPDGSIVQKAVNK
DSQ CACGTGACTACCAAGAAGGTTAAAGCTATTGGTACTGAGACTTATATCAATGTCGCTACAGGCGAGGCGGAAGAGTTCCAAGTTACCAAGATTGAGGAACGTGATTTCAACTTCACTAAGGTGTGGATTAGAAACTTCGTTGCTACTCTTGATTTAGTTGGCAATCAGAAGACTAGGTTAGTCTATTGGATAATTGACAACTTAAAC---CATAATAACCAGCTTATCTGTACTAATCGCCTTATGGCTGAGGAGACGGGTATCTCCCTTGCTACTGTATCAGTTACTATGAAAGCCTTACAGGACGCTAATTTCTTGAAAAAACAGGCTAATGGAGTGTATGTTATCAATCCGGATATCCTCTTCAAGGGCACACAGAAAGCTCGTCTTAATATCCTTAATCAGTTCTCAGAGCTTGGCGCAGAGCCTCAGGAGCTTTCTGATGAACAGAAGATTCAGAATATCACTAAGACTATTGCACAGCTTTCTAAACAGCTTGAAGCCCTACAGTCTAAATCCTCAGTAGTTGATACTGAGATTGAGGGACAGTACACACTACTTCCCGATGGTTCAATTGTTCAGAAGGCTGTTAACAAG
TRN 10010101110011000
NAM O50587_SELRU/6-169
ASQ VTTRKKVKVTGTETYINQSTGEIKEMQVIDIEERDFNFHKVWLEHIIHSMDLIGNQKTRLAFWLINNLN-RDNVLIMTQRKIAEKTGISLETVRQTMKALMESGFLIKINSGAYCVNPDAVFKGGKTDRLNVLIQYRKSEQENTKTSEPTSEKD----------------------------------EPSLFNNEQLK
DSQ GTCACTACTAGGAAAAAAGTCAAAGTAACAGGTACAGAAACCTATATCAATCAGAGTACAGGCGAAATCAAAGAAATGCAGGTCATAGACATTGAGGAGCGAGATTTCAACTTCCACAAGGTCTGGCTGGAACACATAATTCATAGCATGGACTTGATTGGTAACCAGAAAACCCGATTAGCCTTCTGGCTGATAAACAACCTGAAC---CGTGACAATGTCTTGATTATGACTCAACGAAAAATAGCTGAAAAAACGGGTATTTCACTGGAAACCGTAAGGCAAACTATGAAAGCCCTCATGGAGTCGGGGTTCTTGATAAAAATTAACTCTGGGGCTTACTGTGTTAATCCTGATGCAGTGTTTAAGGGCGGAAAAACGGATCGCCTAAATGTGCTTATCCAGTACAGAAAAAGCGAACAGGAAAACACAAAGACCAGTGAGCCGACAAGTGAAAAAGAC------------------------------------------------------------------------------------------------------GAGCCAAGCCTGTTCAACAATGAGCAGTTAAAA
TRN 10010101100011000
NAM Q06462_STAAU/1-154
ASQ MKERYGTVYKGKEEFINKDSGEVIQFDKLYRAQTGGNFVKSTWNCLLQMLGLM-NKRGEVMQYLFKDLNLSSNTVIKTVRELAKETNTSTKTVTETLKIMEKGNIIKRKT-GVIMINPALLMRGDDSKKRYLLLEFEQFDRENE-------------------------------------------LEHALNEYESFK
DSQ ATGAAAGAACGCTATGGAACGGTATATAAAGGGAAAGAAGAATTCATAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATACAGAGCACAAACAGGTGGAAACTTCGTAAAGAGTACATGGAACTGTTTGTTACAAATGTTGGGATTAATG---AATAAAAGAGGGGAAGTAATGCAGTACCTTTTTAAAGACTTAAATCTATCAAGCAATACAGTAATAAAAACAGTTCGAGAACTTGCTAAAGAAACAAATACAAGTACAAAAACAGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACT---GGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAGTAAAAAACGTTATCTCTTACTAGAATTTGAACAGTTCGATAGAGAAAACGAA---------------------------------------------------------------------------------------------------------------------------------TTAGAACACGCTTTAAATGAATATGAAAGTTTTAAG
TRN 10010101110011000
NAM REMA_STAEP/1-157
ASQ MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGNIIKRKT-GVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQ-----------------------------------------ENALYLIIILS
DSQ ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTTAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACT---GGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAA---------------------------------------------------------------------------------------------------------------------------GAAAATGCACTTTATCTGATTATTATTCTTTCA
TRN 10010101100011000
//
|