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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF05320 - Pox_RNA_Pol_19)
FAM  PF05320
PID  Pox_RNA_Pol_19
DES  Poxvirus DNA-directed RNA polymerase 19 kDa subunit
IPR  IPR007984
ANO  6
ALN  177
AID  0.5824
APH  (((RPO7_FOWPV/1-167:0.45948,Q98275_MCV1/1-165:0.26853):0.25544,Q9Q8K6_9POXV/1-164:0.30355):0.07601,Q8JTS5_LSDV/1-170:0.17303,(RPO7_VARV/1-164:0.34961,Q8V3K3_SWPV/1-162:0.20909):0.04277);
ATP  (((RPO7_FOWPV/1-167,Q98275_MCV1/1-165),Q9Q8K6_9POXV/1-164),Q8JTS5_LSDV/1-170,(RPO7_VARV/1-164,Q8V3K3_SWPV/1-162));
ATL  2.13751
DNO  6
DLN  531
DID  0.591718
DPH  ((((Q8V3K3_SWPV/1-162:0.18529,RPO7_VARV/1-164:0.26411):0.04973,Q8JTS5_LSDV/1-170:0.15373):0.12658,Q9Q8K6_9POXV/1-164:0.25757):0.09531,RPO7_FOWPV/1-167:0.33415,Q98275_MCV1/1-165:0.43228);
DTP  ((((Q8V3K3_SWPV/1-162,RPO7_VARV/1-164),Q8JTS5_LSDV/1-170),Q9Q8K6_9POXV/1-164),RPO7_FOWPV/1-167,Q98275_MCV1/1-165);
DTL  1.89875
RID  0.5824
RPH  (((RPO7_FOWPV/1-167:0.45948,Q98275_MCV1/1-165:0.26853):0.25544,Q9Q8K6_9POXV/1-164:0.30355):0.07601,Q8JTS5_LSDV/1-170:0.17303,(RPO7_VARV/1-164:0.34961,Q8V3K3_SWPV/1-162:0.20909):0.04277);
RTP  (((RPO7_FOWPV/1-167,Q98275_MCV1/1-165),Q9Q8K6_9POXV/1-164),Q8JTS5_LSDV/1-170,(RPO7_VARV/1-164,Q8V3K3_SWPV/1-162));
RTL  2.13751
LNK  Q8JTS5_LSDV/1-170:Q8JTS5:AF409138
LNK  Q8V3K3_SWPV/1-162:Q8V3K3:AF410153
LNK  Q98275_MCV1/1-165:Q98275:U60315
LNK  Q9Q8K6_9POXV/1-164:Q9Q8K6:AF170726
LNK  RPO7_FOWPV/1-167:Q05569:X52461
LNK  RPO7_VARV/1-164:P33813:X69198
AMK  xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9Q8K6_9POXV/1-164
ASQ  MDDEGDVS.EYYSEED--SEYAEEEDADEPTESLDTSD-V--PSLKENFKV-ESISSNIE-EPIQVNK----VTISKISDIKKRYTRRISLFEVTGIVAESYNLLQRGRLPLLMDLSNDTL-DDNILNVVIKEIEEETCPIVIEKNGELLSVTDFDKKGLMMHLKYVTTIWKNQGRY
DSQ  ATGGACGACGAGGGGGATGTGAGC...GAGTATTACTCCGAAGAGGAC------AGCGAATACGCCGAGGAAGAGGACGCGGACGAGCCAACCGAATCGTTGGATACGAGCGAT---GTC------CCTTCCTTAAAGGAGAACTTTAAAGTG---GAATCTATATCGTCCAATATAGAA---GAACCAATTCAAGTGAATAAA------------GTTACTATTTCAAAAATATCGGATATAAAAAAACGATACACGCGACGGATTAGTTTGTTCGAAGTAACGGGAATCGTCGCGGAGAGTTACAATCTCTTACAAAGGGGTAGGTTGCCCCTGTTGATGGATCTATCCAACGATACGTTA---GATGATAACATACTCAACGTGGTCATTAAGGAAATCGAAGAGGAAACATGTCCTATCGTTATTGAGAAAAATGGAGAATTATTATCCGTTACGGATTTTGATAAGAAGGGTTTAATGATGCATTTGAAGTACGTAACAACTATCTGGAAAAACCAAGGAAGATAT
TRN  10010101100011000
NAM  Q8JTS5_LSDV/1-170
ASQ  MAESDDIIdDYISDED---ASDEFEEEEEEEESLETSD-VPSLKQSN-YKVGSSISINIE-DTNQQNITNASIISSKISAIKKRYTRRISLFEITGIIAESYNLLQRGRMPLVLNLSDDTM-KQKILHIVIEEIKEGTCPIIIEKNGELLSVTDFDKKGLYNHLDYIINIWKKQNRF
DSQ  ATGGCCGAATCTGATGATATTATCgacGATTATATTTCTGACGAAGAT---------GCGAGCGATGAATTTGAAGAAGAAGAAGAAGAAGAAGAATCGTTAGAAACAAGTGAT---GTTCCGTCTTTGAAGCAATCTAAT---TATAAAGTTGGGTCGTCCATATCTATTAATATAGAG---GATACCAATCAACAAAATATAACTAACGCAAGCATAATAAGTTCTAAAATATCAGCTATTAAAAAAAGATACACAAGAAGAATAAGTTTATTTGAAATTACTGGTATTATAGCTGAAAGTTATAATCTTTTACAACGTGGAAGAATGCCACTTGTATTAAATTTATCAGATGATACTATG---AAACAAAAGATTTTGCATATAGTCATTGAAGAAATTAAAGAGGGCACTTGTCCTATAATAATTGAAAAGAATGGAGAATTGTTATCCGTAACGGATTTTGATAAAAAAGGACTTTATAATCATCTTGATTATATTATCAATATTTGGAAAAAACAAAACAGATTT
TRN  10010101110011000
NAM  Q8V3K3_SWPV/1-162
ASQ  MADSEDIV.EYSSNDEEDSNYEEE-EEDEPTD---TSD-VPSLKPSN-YKD---ISTNVE-DIEENIK----NISTKISAIKRRYTRRISLFEVVGIIAESYNLLQRGRLPLILDLSDETMIKNNIIRITIKEIKDDTCPIIIEKNGELLSTSDFDRNGLMYHLDYIIRIWKKQNRY
DSQ  ATGGCAGATAGTGAGGATATTGTA...GAATATAGTTCTAATGACGAAGAGGATAGTAACTATGAAGAAGAA---GAAGAGGATGAACCTACAGAT---------ACGAGCGAT---GTTCCCTCTTTAAAACCATCAAAT---TACAAGGAT---------ATATCTACAAACGTGGAA---GATATAGAGGAAAATATTAAA------------AATATTAGTACTAAAATATCAGCTATTAAGCGACGATATACTAGAAGAATAAGTTTGTTTGAAGTGGTAGGTATTATAGCTGAAAGTTATAATTTATTACAGCGAGGTAGATTACCTCTCATATTAGATTTATCCGATGAAACTATGATAAAAAACAATATTATTCGTATAACAATTAAAGAGATAAAAGATGATACGTGTCCAATAATTATAGAAAAAAATGGAGAGTTATTGTCTACATCAGATTTTGATAGAAATGGATTAATGTATCATTTGGACTATATTATAAGAATATGGAAAAAACAAAATAGATAT
TRN  10010101110011000
NAM  RPO7_VARV/1-164
ASQ  MADTDDII.DYESDDL--TEYEDDDEEEEDGESLETSD-I--DPKSS-YKIVESASTHIE-DAHSNLK----HIGNHISALKRRYTRRISLFEIAGIIAESYNLLQRGRLPLVSEFSNETM-KQNMLHVIIQEIEEGSCPIVIEKNGELLSVNDFDKDGLKFHLDYIIKIWKLQKRY
DSQ  ATGGCAGACACAGACGATATTATC...GACTATGAATCCGATGATCTC------ACTGAATACGAGGATGATGATGAAGAGGAAGAAGATGGAGAGTCACTAGAAACTAGTGAT---ATA------GATCCCAAATCTTCT---TATAAGATTGTAGAATCAGCATCCACTCATATAGAA---GATGCACATTCCAATCTTAAA------------CATATAGGGAATCATATATCTGCTCTTAAACGACGCTATACTAGACGTATAAGTCTATTTGAAATAGCGGGTATAATAGCAGAAAGCTATAACTTGCTTCAACGAGGAAGATTACCTCTAGTTTCAGAATTTTCTAACGAAACGATG---AAGCAAAATATGCTACATGTAATTATACAAGAGATAGAGGAGGGTTCTTGTCCTATAGTCATCGAAAAGAACGGAGAATTGTTGTCGGTAAACGATTTTGACAAAGATGGTCTGAAATTCCATCTAGACTATATTATCAAAATTTGGAAACTTCAAAAACGATAT
TRN  10010101100011000
NAM  Q98275_MCV1/1-165
ASQ  MENSADIN.DFLSGED--FSSYEEMGSDELTEPSEEGS-A--SKPSE-YKVDSRVDSRDDVETQSPPR----QISERIADIKRRYTRRISLFEITGILCESFNLLQRGRLPLVSDLSDETF-REEILHVVVREIEEGTCPVVIQKNGELLSVTDFDATGLRYHLDYIISIWKQQHRY
DSQ  ATGGAGAATTCCGCGGACATAAAC...GATTTTCTCTCCGGGGAGGAC------TTCAGCAGCTATGAGGAGATGGGCTCGGACGAGCTCACGGAGCCCAGCGAGGAGGGCTCG---GCC------TCGAAGCCGTCGGAG---TACAAGGTGGACTCGCGCGTAGACAGCAGGGACGACGTGGAGACTCAGTCTCCGCCGCGG------------CAGATTAGCGAGCGCATCGCGGACATCAAGCGCCGCTACACGCGCAGGATCAGCCTTTTCGAGATCACGGGTATCCTCTGCGAGAGCTTCAACCTGCTGCAACGCGGCCGCCTGCCGCTGGTGTCGGACCTATCCGACGAGACTTTC---CGCGAGGAAATCCTGCACGTGGTCGTGCGCGAGATCGAAGAAGGCACGTGTCCAGTGGTGATCCAGAAGAACGGCGAGCTGCTGTCCGTGACGGACTTCGACGCCACCGGCCTCCGCTACCACCTGGACTACATCATCTCCATTTGGAAACAGCAACACCGCTAC
TRN  10010101100011011
NAM  RPO7_FOWPV/1-167
ASQ  MDNSMDIN.DILLSDDNDYKSYDE-DDDSISDIGETSDDCCTTKQSD-SRI-ESFKFDET-TQSPHPK----QLSERIKAIKQRYTRRISLFEITGILSESYNLLQRGRIPLLNDLTEETF-KDSIINIMFKEIEQGNCPIVIQKNGELLSLTDFDKKGVQYHLDYIKTIWRNQRKL
DSQ  ATGGACAATTCTATGGATATTAAC...GATATACTACTGTCAGATGATAACGATTATAAGAGTTACGATGAA---GATGATGACTCTATATCCGATATAGGAGAAACAAGTGATGATTGTTGTACGACTAAACAATCGGAT---TCCAGGATA---GAATCTTTCAAGTTCGATGAAACT---ACTCAATCACCTCATCCAAAA------------CAATTGAGCGAAAGGATAAAGGCTATAAAACAACGATACACTAGACGTATAAGCCTATTTGAAATAACTGGAATTTTATCCGAAAGTTATAATTTATTACAACGTGGAAGAATTCCATTACTTAATGACCTGACAGAAGAAACGTTT---AAAGATTCAATTATTAATATTATGTTTAAAGAAATAGAACAAGGAAATTGTCCTATAGTTATACAAAAGAATGGAGAACTTTTATCCTTAACCGACTTTGATAAAAAAGGAGTACAGTATCATCTGGACTACATTAAAACTATATGGCGTAACCAACGTAAATTA
TRN  10010101100011000
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