pandit
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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
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FAM PF05137
PID PilN
DES Fimbrial assembly protein (PilN)
IPR IPR007813
ANO 11
ALN 177
AID 0.240709
APH (((Q9KNU7_VIBCH/7-168:1.01095,(Q9PGD2_XYLFA/4-165:0.62137,(Q9AM62_9GAMM/4-165:0.72591,(O05129_NEIGO/7-169:1.14018,(Q51352_PSEAE/4-165:0.15952,Q52540_PSESX/4-165:0.19387):0.28920):0.04965):0.05674):0.10667):0.34958,((YRFC_SHIFL/5-162:1.50801,P74187_SYNY3/6-181:1.78506):0.17809,Q988B3_RHILO/184-335:0.86957):0.35431):0.91695,GSPL_XANCP/195-348:0.06046,Q9PD55_XYLFA/204-357:0.42562);
ATP (((Q9KNU7_VIBCH/7-168,(Q9PGD2_XYLFA/4-165,(Q9AM62_9GAMM/4-165,(O05129_NEIGO/7-169,(Q51352_PSEAE/4-165,Q52540_PSESX/4-165))))),((YRFC_SHIFL/5-162,P74187_SYNY3/6-181),Q988B3_RHILO/184-335)),GSPL_XANCP/195-348,Q9PD55_XYLFA/204-357);
ATL 10.7302
DNO 11
DLN 531
DID 0.385038
DPH ((((P74187_SYNY3/6-181:1.04042,((((Q9PGD2_XYLFA/4-165:0.46027,Q9AM62_9GAMM/4-165:0.54594):0.10260,O05129_NEIGO/7-169:0.77789):0.04611,Q9KNU7_VIBCH/7-168:0.63258):0.04854,(Q51352_PSEAE/4-165:0.16189,Q52540_PSESX/4-165:0.22972):0.16074):0.10836):0.17514,YRFC_SHIFL/5-162:0.97152):0.08205,Q988B3_RHILO/184-335:0.48647):0.52240,GSPL_XANCP/195-348:0.04184,Q9PD55_XYLFA/204-357:0.37799);
DTP ((((P74187_SYNY3/6-181,((((Q9PGD2_XYLFA/4-165,Q9AM62_9GAMM/4-165),O05129_NEIGO/7-169),Q9KNU7_VIBCH/7-168),(Q51352_PSEAE/4-165,Q52540_PSESX/4-165))),YRFC_SHIFL/5-162),Q988B3_RHILO/184-335),GSPL_XANCP/195-348,Q9PD55_XYLFA/204-357);
DTL 6.83877
RID 0.240709
RPH (((Q9KNU7_VIBCH/7-168:1.01095,(Q9PGD2_XYLFA/4-165:0.62137,(Q9AM62_9GAMM/4-165:0.72591,(O05129_NEIGO/7-169:1.14018,(Q51352_PSEAE/4-165:0.15952,Q52540_PSESX/4-165:0.19387):0.28920):0.04965):0.05674):0.10667):0.34958,((YRFC_SHIFL/5-162:1.50801,P74187_SYNY3/6-181:1.78506):0.17809,Q988B3_RHILO/184-335:0.86957):0.35431):0.91695,GSPL_XANCP/195-348:0.06046,Q9PD55_XYLFA/204-357:0.42562);
RTP (((Q9KNU7_VIBCH/7-168,(Q9PGD2_XYLFA/4-165,(Q9AM62_9GAMM/4-165,(O05129_NEIGO/7-169,(Q51352_PSEAE/4-165,Q52540_PSESX/4-165))))),((YRFC_SHIFL/5-162,P74187_SYNY3/6-181),Q988B3_RHILO/184-335)),GSPL_XANCP/195-348,Q9PD55_XYLFA/204-357);
RTL 10.7302
LNK GSPL_XANCP/195-348:P34027:AE012165
LNK O05129_NEIGO/7-169:O05129:U72876
LNK P74187_SYNY3/6-181:P74187:BA000022
LNK Q51352_PSEAE/4-165:Q51352:U12892
LNK Q52540_PSESX/4-165:Q52540:L28837
LNK Q988B3_RHILO/184-335:Q988B3:BA000012
LNK Q9AM62_9GAMM/4-165:Q9AM62:AF329876
LNK Q9KNU7_VIBCH/7-168:Q9KNU7:AE004329
LNK Q9PD55_XYLFA/204-357:Q9PD55:AE003982
LNK Q9PGD2_XYLFA/4-165:Q9PGD2:AE003888
LNK YRFC_SHIFL/5-162:P64635:AE015349
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NAM P74187_SYNY3/6-181
ASQ VNFLKDRNSDVVRSTQTTTITLTGDDLQKQMPLYIGAGVMVLLPALAGLGVLLINWQKGVAQTNIQQLETELSQLQGEQQKIQEVEAKTAAAHQEADGLIGVFNQIKPWSALFQEITNQLPQEVQLQSI.QQEGNVITLSGFAGNYGSLNDFLLTLQSSKFLQANKTKLMTANAAAL
DSQ GTAAATTTTCTCAAGGATCGTAACTCTGACGTTGTTCGGTCGACCCAAACTACCACTATCACCCTAACGGGGGACGATCTACAGAAGCAAATGCCGCTTTATATTGGGGCGGGGGTGATGGTACTTTTGCCTGCTTTGGCGGGGTTGGGAGTACTGCTAATCAATTGGCAAAAGGGTGTTGCTCAAACCAATATCCAACAATTGGAAACGGAGTTATCCCAGCTACAGGGGGAACAGCAAAAAATCCAGGAAGTTGAGGCAAAAACGGCGGCGGCTCACCAAGAAGCAGATGGGCTAATTGGCGTTTTTAATCAAATTAAACCTTGGTCAGCCCTGTTTCAGGAGATAACTAATCAGTTGCCCCAGGAAGTGCAACTCCAAAGTATC...CAGCAGGAAGGAAATGTAATCACTCTTTCCGGTTTTGCTGGCAACTATGGCTCCCTCAATGATTTTCTGCTGACTTTGCAAAGCTCGAAGTTTTTGCAGGCTAATAAAACTAAGCTGATGACAGCCAACGCGGCAGCCCTA
TRN 10010101100011000
NAM Q9KNU7_VIBCH/7-168
ASQ VNLLPWRD--------------ARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFSLDQQIAKLKIAEEEHKALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKI.KMNGHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIVSGNKRF
DSQ GTCAACTTACTGCCGTGGCGTGAT------------------------------------------GCACGGCGTGAAGCACATAAGCGGCGCTTTTTGGGGTTAGTGACACTCGGTGTTTTGCTGGCGGTGTTGATGCAATTTGCAGCAGGCGAATACTTGGGCGGACAAATGGCTTTGCAACAAGAGCGGATTGGTTATTTGCAACAACATATCTTCTCGCTGGATCAGCAGATCGCTAAGTTGAAGATCGCTGAAGAAGAACATAAGGCGTTATTGACCCGTTTGACTGTGGTGGAGCAACTGCAGCAAAAGCGCAATAAAACGACTGAGTTTATGAACCAAATGCCCAACCTGATCCCTGAAGGCGTCTATGTCGACAAGATC...AAGATGAATGGCCATCAGATAGAAATAACCGGGATTAGCGATTCCACCGCTCGCTTGGCAACCATGCTCGATAACTTGGAGAAGTCGGACAAATTAACCGATGTTGAAATGCATGAAATCGTTTCAGGGAATAAGCGATTT
TRN 10010101100011000
NAM Q9AM62_9GAMM/4-165
ASQ INLLPWRD--------------KLREKRKKEFLVFSILVGLLGCAAVLMGWFYFGHKLNDQEQANQLILTTNQGLDQQLKSLDGLQQQRNAIVERMKLIQGLQAQRPVTVRLIDELVRVTPSNMYLTKF.TRTGDKFTIEGKAESPNTVAELLRNLEASAWYRNAFMNSFLAAEDNK
DSQ ATTAACCTGCTTCCGTGGCGAGAT------------------------------------------AAGCTGCGAGAAAAAAGAAAAAAAGAATTTCTGGTATTTAGCATATTGGTTGGGTTGTTGGGTTGTGCTGCAGTATTAATGGGATGGTTCTATTTTGGGCATAAATTAAACGATCAGGAACAAGCAAATCAGCTCATCTTGACGACTAACCAAGGATTAGATCAACAATTAAAATCACTGGATGGCCTGCAACAGCAACGGAATGCCATTGTGGAGCGGATGAAACTCATTCAAGGTTTACAGGCTCAGCGACCAGTCACTGTTCGCCTTATTGATGAATTGGTACGTGTTACTCCGAGCAATATGTATTTAACTAAATTT...ACCCGTACAGGCGATAAGTTTACCATTGAAGGTAAAGCTGAAAGTCCGAATACTGTGGCCGAATTATTACGCAATCTTGAGGCATCAGCATGGTATCGAAATGCCTTTATGAACTCGTTTCTGGCAGCAGAAGACAATAAG
TRN 10010101100011000
NAM Q9PGD2_XYLFA/4-165
ASQ INLLPWRV--------------ERRKQREREFYMMLGFSTLVGILVSALVWFYYDAQVSGQNDRNAFLASEIEGVKAQNREIDQLDKKKEHLLARKKVIEELQSNRSQMVHLFDSLARTIPDGVVLTTI.KQEGNSVTLQGRSQSNVRVSTYMRNIEGSGWMTNPDLSIIEAKEQDK
DSQ ATTAACTTATTGCCCTGGCGCGTT------------------------------------------GAGCGCCGCAAGCAGCGTGAGCGTGAGTTCTATATGATGCTTGGGTTTTCCACATTGGTGGGTATCCTCGTTTCGGCACTTGTGTGGTTCTATTATGATGCGCAGGTCAGTGGTCAGAATGATCGCAACGCATTCTTGGCTTCCGAGATAGAGGGCGTTAAGGCGCAGAATCGGGAAATCGACCAACTTGACAAGAAGAAAGAGCATTTGCTGGCGCGTAAGAAAGTGATTGAAGAGCTGCAATCAAACCGTTCGCAAATGGTTCATTTATTCGATTCGTTGGCACGTACCATCCCGGATGGTGTGGTTCTGACCACTATT...AAGCAAGAAGGTAATAGTGTGACTTTGCAAGGACGCTCTCAGTCCAACGTGAGAGTCAGTACTTACATGCGCAATATTGAGGGGTCGGGATGGATGACTAATCCCGATTTGTCGATTATTGAAGCCAAGGAACAGGATAAA
TRN 10010101100011000
NAM Q52540_PSESX/4-165
ASQ INLLPWRE--------------ELREERKKRFLTALVGVLVVSVGILFLIDRYVSNAIEHQMARNAFVQTQIAQLDIRIKEISDLKARRKQLLERMKIIQDLQGNRPITGRVFDQLARTLPDGVYFSQV.KMTDKLIAISGAAESNNRVSDLMRNLEASDWLEAPSLTEVKATTAGA
DSQ ATCAACTTATTACCGTGGCGCGAA------------------------------------------GAGCTTCGCGAAGAACGTAAAAAGCGCTTCCTGACCGCGCTGGTCGGCGTGTTGGTGGTGTCAGTCGGTATTCTGTTTCTGATTGATCGTTACGTCAGCAACGCCATTGAGCATCAGATGGCGCGCAACGCGTTTGTGCAGACGCAGATCGCTCAGCTCGATATACGCATCAAGGAGATCAGCGACCTGAAGGCGCGTCGCAAACAGTTACTTGAGCGCATGAAGATCATTCAGGACCTGCAAGGCAACCGCCCGATCACGGGGCGTGTATTCGATCAACTGGCGCGCACTCTTCCGGATGGCGTTTATTTCTCGCAGGTC...AAAATGACCGACAAGCTGATTGCCATCAGTGGCGCTGCCGAATCGAACAACCGGGTTTCCGACCTGATGCGCAACCTTGAAGCCTCTGACTGGCTGGAAGCGCCGAGCCTGACCGAAGTGAAGGCCACGACTGCAGGGGCC
TRN 10010101100011000
NAM Q51352_PSEAE/4-165
ASQ INLLPWRE--------------ELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQLLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDL.KMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKAVTQGA
DSQ ATCAACCTTCTACCCTGGCGCGAA------------------------------------------GAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGGCGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCAACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAATTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCGGACCTTGCCCGACGGCGTGTATTTCACCGACCTG...AAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCAACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCGGTGACCCAGGGCGCG
TRN 11011111101111111
NAM O05129_NEIGO/7-169
ASQ INLLPYRE--------------EMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQEKDAFLIKKNKIGELQIKRLQAAKILDSLNVAVPGSTYLTSLdAVTADTYRLSGRTSSDNRVAAMMRGDAQYRHIQATRIVKHQEKQFAS
DSQ ATCAACCTCCTCCCCTACAGGGAA------------------------------------------GAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCTGATGTACGGCGCCGTGCTCACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGTCGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAAAAAGATGCCTTCCTGATTAAGAAAAACAAAATCGGGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAGCCTGAATGTGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGgatGCCGTTACCGCCGACACTTATCGGCTCAGCGGCAGGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTAAGCATCAAGAAAAACAATTCGCATCA
TRN 10010101100011001
NAM Q988B3_RHILO/184-335
ASQ LAAI-WPP--------------TARDRRARTAWIAALSVLAGAVLVTFAHAHWRAWQAEAE------LDTQIADAQVLAKAARASLQKRQAGIERIEKIRQEKKTTASLVRVWAELTHLLPDTAWLTDL.SAKGDDLTISGFSTSA---AELIQPIDASPLFSAPEFASPVVKVPGQ
DSQ CTGGCCGCCATC---TGGCCGCCG------------------------------------------ACGGCGCGCGACCGGCGTGCCAGGACCGCCTGGATTGCGGCCCTTTCGGTGCTGGCCGGGGCGGTGCTGGTGACCTTTGCGCATGCGCATTGGCGCGCCTGGCAGGCCGAGGCCGAA------------------CTGGATACGCAGATCGCCGATGCGCAGGTCCTGGCCAAAGCGGCGCGCGCCTCGCTGCAGAAGCGCCAGGCCGGCATCGAGCGGATCGAAAAGATCCGCCAGGAAAAGAAGACGACGGCGTCGCTGGTGCGCGTCTGGGCCGAGTTGACGCATCTGCTGCCCGACACGGCCTGGCTGACCGATCTC...TCGGCCAAGGGCGACGACCTGACCATTTCAGGCTTTTCCACCTCGGCC---------GCCGAACTGATCCAGCCGATCGACGCCTCGCCGCTGTTTTCGGCGCCTGAATTCGCCTCGCCGGTGGTCAAGGTTCCCGGTCAG
TRN 10010101100011001
NAM YRFC_SHIFL/5-162
ASQ INFLPWRQ------------------QRRTAFLRFWLLMFVAPLLLAVGITLILRLTGSAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEALAALLPEHAWLTTI.SWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGR
DSQ ATTAATTTTTTGCCCTGGCGACAG------------------------------------------------------CAACGCCGGACCGCTTTTCTGCGTTTCTGGTTGCTGATGTTCGTTGCGCCTCTGCTGCTGGCCGTCGGGATAACGCTAATACTGCGTCTGACAGGCAGCGCCGAAGCGCGCATAGACGCAGTTTTGCTTCAGGCGGAACAACAACTCGCCCGCAGCTTACAGATAACGAAGCCACGTTTGCTGGAGCAACAGCAGTTACGCGAACAGCGTTCGCAACGGCAGCGCCAGCGACAATTTACCCGCGACTGGCAATCTGCGCTGGAAGCACTGGCGGCGCTTTTACCCGAGCACGCCTGGCTGACAACGATA...AGCTGGCAGCAGGGAACGCTGGAGATCAAGGGGCTGACAACAAGCATTACCGCGTTAAACGCACTAGAAACGTCACTCCGCCAGGATGCGTCTTTTCATCTCAATCAGCGGGGAGCCACGCAGCAGGATGCGCAGGGACGC
TRN 10010111100111000
NAM Q9PD55_XYLFA/204-357
ASQ VNLLPPVQ--------------RWRCSDPMRRWNL-VLAAVALLLVATAGALLLNNRIRVAEE----LRLQVQAHAISARRVAAERQRLVTLIEGVRFLDERRTLRPTVIEVWEELSRRLPNGTYLEKF.AIEDGQLHLMGMSNDA---SSLVRLLEGSKLWRTPSLSSVLQSNVGS
DSQ GTGAATCTGTTGCCGCCCGTGCAG------------------------------------------CGGTGGCGGTGCAGTGATCCGATGCGACGTTGGAATCTG---GTTCTAGCTGCGGTCGCGTTGCTGTTGGTGGCGACTGCCGGAGCGCTGTTGTTGAATAATCGCATCCGTGTGGCTGAGGAA------------CTGCGCTTGCAAGTGCAGGCGCATGCCATCAGTGCACGCCGCGTTGCGGCTGAACGTCAACGATTGGTCACGCTGATTGAAGGTGTTCGTTTCCTTGATGAACGCCGCACTCTGCGCCCGACAGTGATCGAAGTTTGGGAGGAACTGAGCCGACGCTTGCCGAACGGCACCTATTTGGAAAAATTT...GCGATTGAGGATGGACAATTGCATTTGATGGGCATGAGTAATGATGCA---------TCCTCGTTGGTGCGTCTTCTGGAAGGTTCCAAGTTATGGCGCACGCCGTCATTAAGCAGTGTGCTACAGAGTAATGTGGGAAGC
TRN 11011101101011000
NAM GSPL_XANCP/195-348
ASQ VNLLPPAR--------------RLRRSDPMQRWNL-LLAVAALVLLAVAGWLLLDNRRQAADD----LRAQVQANAGRARQVAAERQQLLELVEGAAFFQEQRATRPTSVEIWDELSRRLPSGTYLEKF.SVEGGQLQLIGLSKEA---SSLVRRLEGSPLWHTPSLTGVLQSDAGR
DSQ GTGAACCTGCTGCCGCCGGCCCGC------------------------------------------CGCTTGCGCCGCAGCGACCCGATGCAACGCTGGAATCTG---CTGCTCGCCGTCGCCGCGCTGGTGTTGCTCGCGGTGGCCGGCTGGCTGCTGCTGGACAACCGTCGCCAGGCCGCCGACGAC------------CTGCGTGCCCAGGTGCAGGCCAACGCCGGGCGCGCGCGCCAGGTGGCCGCCGAGCGCCAGCAGTTGCTGGAACTGGTGGAGGGCGCAGCGTTCTTCCAGGAGCAACGTGCCACGCGTCCGACCTCGGTGGAAATCTGGGACGAATTGAGCCGCCGCCTGCCCAGCGGCACCTATCTGGAAAAGTTT...TCGGTCGAGGGCGGGCAATTGCAGTTGATCGGTTTGAGCAAGGAGGCC---------TCCTCGCTGGTGCGCCGTCTGGAAGGTTCGCCGTTGTGGCACACGCCATCGCTGACCGGCGTGCTGCAGAGCGATGCCGGCCGC
TRN 11011111101111111
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