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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF05125 - Phage_cap_P2)
FAM  PF05125
PID  Phage_cap_P2
DES  Phage major capsid protein, P2 family
IPR  IPR006441
ANO  5
ALN  345
AID  0.447177
APH  (((VPN_BPP2/6-342:0.16628,O80304_BP186/6-342:0.14941):0.23884,Q48277_HAESO/6-337:0.50033):0.16678,Q9ZXM3_9CAUD/6-336:0.15561,VPN_BPHP1/3-330:1.42233);
ATP  (((VPN_BPP2/6-342,O80304_BP186/6-342),Q48277_HAESO/6-337),Q9ZXM3_9CAUD/6-336,VPN_BPHP1/3-330);
ATL  2.79958
DNO  5
DLN  1035
DID  0.513179
DPH  (((VPN_BPP2/6-342:0.17384,O80304_BP186/6-342:0.13499):0.15845,Q9ZXM3_9CAUD/6-336:0.24712):0.21930,Q48277_HAESO/6-337:0.33619,VPN_BPHP1/3-330:0.84940);
DTP  (((VPN_BPP2/6-342,O80304_BP186/6-342),Q9ZXM3_9CAUD/6-336),Q48277_HAESO/6-337,VPN_BPHP1/3-330);
DTL  2.11929
RID  0.447177
RPH  (((VPN_BPP2/6-342:0.16628,O80304_BP186/6-342:0.14941):0.23884,Q48277_HAESO/6-337:0.50033):0.16678,Q9ZXM3_9CAUD/6-336:0.15561,VPN_BPHP1/3-330:1.42233);
RTP  (((VPN_BPP2/6-342,O80304_BP186/6-342),Q48277_HAESO/6-337),Q9ZXM3_9CAUD/6-336,VPN_BPHP1/3-330);
RTL  2.79958
LNK  O80304_BP186/6-342:O80304:U32222
LNK  Q48277_HAESO/6-337:Q48277:U28154
LNK  Q9ZXM3_9CAUD/6-336:Q9ZXM3:AB008550
LNK  VPN_BPHP1/3-330:P51720:U24159
LNK  VPN_BPP2/6-342:P25477:AF063097
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  VPN_BPHP1/3-330
ASQ  KQAYYALAAALAKHFNQPLDSVLRGESFALKAPEAALLGENIQQRSDFLKQINMIQVAHTKGQKLFGATEKGVTGRKQTG-----RNLANLDHTQNGFELAETDSGIIVPWALFDSFAIFKDRLVELYSEYFQNQVALDILQIGWNGQSVADNTTKAD---LSDVNKGWLKLLQEQRAANFM----TESTKSSGKI---TIF-GDNADYANLDDLAFDLKQG-LDFRHQNRNDLVFLVGADLVSKETKLIQQKHGLTPTEKAALGSHNLMGSFGGMNAITPPNFPARAAAVTTLKNLSVYTEAESVRRSLRNDEDKKGLVTSYYRQEGYVVEDLGLMTAIDHTKV
DSQ  AAACAAGCGTATTACGCCCTAGCGGCAGCATTAGCGAAACACTTTAATCAACCTCTTGATTCAGTGTTGCGTGGAGAAAGTTTTGCACTTAAAGCACCTGAAGCAGCATTGTTAGGCGAAAATATTCAGCAACGTTCTGATTTCTTGAAACAAATCAATATGATTCAAGTAGCACATACGAAGGGTCAAAAATTATTTGGTGCAACAGAAAAAGGCGTTACTGGTCGTAAACAAACTGGC---------------CGTAATCTGGCTAATCTTGATCATACTCAAAATGGCTTTGAATTAGCCGAAACGGACAGTGGCATTATTGTGCCATGGGCATTATTCGATTCCTTCGCTATTTTCAAGGATCGCCTTGTTGAGCTTTATAGCGAATATTTCCAAAACCAAGTTGCATTAGACATCTTGCAAATTGGTTGGAACGGTCAGAGCGTAGCAGATAATACAACAAAAGCGGAT---------TTATCCGATGTGAATAAAGGCTGGTTGAAACTTTTACAAGAACAACGTGCAGCCAACTTTATG------------ACCGAATCTACAAAATCCTCAGGCAAAATT---------ACCATTTTT---GGTGATAACGCCGATTACGCGAATCTTGATGATTTAGCCTTTGACTTAAAACAAGGC---TTAGATTTCCGTCATCAAAACCGTAATGACTTAGTCTTCCTTGTTGGTGCAGACTTAGTCAGCAAAGAAACGAAACTCATTCAGCAAAAACATGGCTTAACCCCTACGGAAAAAGCTGCATTAGGTTCACATAACTTAATGGGCTCATTCGGTGGAATGAATGCCATTACCCCACCAAACTTCCCAGCACGTGCTGCAGCAGTGACAACCCTTAAAAATTTAAGTGTGTACACCGAGGCTGAAAGTGTACGTCGCTCTTTACGTAACGATGAAGATAAAAAAGGTTTGGTGACATCTTACTACCGACAAGAAGGCTATGTTGTGGAAGATTTAGGTTTAATGACTGCAATCGACCACACCAAAGTG
TRN  11011101101011000
NAM  VPN_BPP2/6-342
ASQ  RFKFNAYLSRVAELNGIDAGDVSK--KFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWAR-YQDFQLRIRNAIIKRQSLDFIMAGFNGVKRAETSDRSSNPMLQDVAVGWLQKYRNEAPARVMSKVTDEEGRTTSEV---IRV-GKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQLLADKYFPIVNKE-QDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMDDSHRRVIEENPKLDRVENYESMNIDYVVEDYAAGCLVEKIKV
DSQ  CGCTTTAAATTTAATGCCTACCTGTCCCGTGTTGCCGAACTGAACGGCATCGACGCCGGTGATGTGTCGAAA------AAATTCACCGTTGAACCGTCGGTCACCCAGACCCTGATGAACACCATGCAGGAGTCCTCTGACTTTCTGACCCGCATCAATATTGTGCCGGTCAGCGAAATGAAAGGGGAAAAAATTGGTATCGGTGTCACCGGCTCCATCGCCAGCACTACCGACACTGCCGGTGGTACCGAGCGTCAGCCGAAGGACTTCTCGAAGCTGGCGTCAAACAAGTACGAATGCGACCAGATTAACTTCGATTTTTATATCCGCTACAAAACGCTGGACCTGTGGGCGCGT---TATCAGGATTTCCAGCTCCGTATCCGTAACGCCATTATCAAACGCCAGTCCCTTGATTTCATCATGGCCGGTTTTAACGGCGTGAAGCGTGCCGAAACCTCTGACCGCAGCAGCAATCCGATGTTGCAGGATGTGGCGGTCGGCTGGCTGCAGAAATACCGCAATGAAGCACCGGCGCGCGTGATGAGCAAGGTCACTGACGAGGAAGGCCGCACCACCTCTGAGGTT---------ATCCGCGTG---GGTAAGGGCGGTGATTATGCCAGCCTTGATGCACTGGTGATGGATGCGACCAACAACCTGATTGAACCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTACTGGCGGACAAGTATTTCCCCATCGTCAACAAGGAG---CAGGACAACAGCGAAATGCTGGCCGCTGACGTCATCATCAGCCAGAAACGCATCGGTAACCTACCAGCGGTACGCGTCCCGTACTTCCCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGACAGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTCAATGAACATTGATTACGTGGTGGAAGACTACGCCGCCGGTTGTCTGGTGGAAAAAATCAAGGTC
TRN  11011101101011001
NAM  O80304_BP186/6-342
ASQ  RFKFNAYLTQLAKLNGISVDDVSK--KFTVEPSVTQTLMNTVQASSAFLQMINILPVAEMKGEKIGVGVTGTIASTTDTSGDKERQTADFTALESNKYECNQINFDFHLTYKRLDLWAR-FQDFQRRIRDAIVQRQALDFIMAGFNGTTRADTSDRVKNPMLQDVAVGWLQKYRNEAPARVM----SNITDADGKVVSAVIRVGKNGDYENLDALVMDGTNTLIDEIYQDDPKLVAIVGRKLLADKYFPLVNKQ-QENTESLAADIIISQKRIGNLPAVRVPYFPANAVFVTTLENLSIYFMDESHRRSIDENPKKDRVENYESMNIDYVVEAYAAGCLLENITL
DSQ  CGTTTTAAGTTCAATGCCTATCTGACCCAGCTCGCCAAACTGAACGGCATCAGCGTTGATGACGTCAGCAAA------AAATTCACCGTCGAGCCGTCCGTCACGCAAACGCTGATGAACACCGTGCAGGCGTCATCCGCGTTTCTGCAGATGATTAACATTCTGCCGGTCGCAGAAATGAAGGGTGAGAAAATCGGTGTCGGTGTGACCGGCACCATCGCCAGCACGACCGACACCTCGGGCGACAAAGAGCGCCAGACCGCAGATTTTACCGCGCTTGAGTCCAACAAGTACGAGTGCAACCAGATTAACTTTGACTTCCACCTGACCTATAAACGCCTCGACCTGTGGGCGCGT---TTTCAGGACTTTCAGCGTCGTATTCGCGACGCCATTGTCCAGCGTCAGGCACTGGATTTCATCATGGCCGGGTTTAACGGTACCACCCGCGCTGACACCTCTGACCGTGTTAAAAACCCGATGCTGCAGGATGTGGCCGTTGGCTGGCTGCAGAAATACCGCAATGAAGCCCCGGCGCGTGTGATG------------AGCAACATCACCGACGCTGACGGTAAAGTCGTTTCGGCAGTGATTCGCGTCGGTAAAAACGGCGACTATGAGAACCTCGACGCACTGGTGATGGATGGTACCAATACCCTGATTGACGAGATTTATCAGGATGACCCGAAACTCGTTGCCATCGTTGGCCGTAAGCTGCTGGCCGACAAATATTTTCCGCTGGTCAACAAACAG---CAGGAAAACACCGAGTCGCTCGCGGCGGATATCATCATCAGCCAGAAGCGCATCGGCAACCTGCCAGCCGTACGTGTGCCGTACTTCCCGGCGAACGCGGTGTTCGTGACCACGCTGGAAAACCTCTCTATCTATTTCATGGATGAGAGCCACCGCCGCAGCATTGATGAAAACCCGAAAAAAGACCGCGTGGAAAACTACGAGTCGATGAACATCGACTATGTGGTCGAGGCGTATGCCGCCGGGTGCCTGCTGGAAAACATCACCCTG
TRN  11011101101011001
NAM  Q9ZXM3_9CAUD/6-336
ASQ  RKQFDAYLAQLAKLNGVNS-AVQT---FAVEPSVQQKLEQRIQESSEFLKQINVYGVDELQGEKIGIGVSGTIASRTDTTGDGVRKPRDVSALDNQRYECKHTDFDTAITYAMLDAWAK-FPEFQALLRDAILKRQALDRLMIGFNGTSAAATTNRAANPLLQDVNIGWFQQYRNNAPARVL----K-EGKTTGKV---VVGNGADADYKNLDALVFDVVSSLIDPWHRRDPGLVVILGRELVHDKYFPMVNKD-QPATEKIATDLILSQKRMGGLPPVEVPYVPEKGLMVTTLKNLSLYWQIGGRRRYLKEVPEKNRIENYESSNDAYVVEDYGLGCLVENIEV
DSQ  CGCAAACAGTTCGACGCCTACCTGGCGCAGCTCGCCAAGCTCAACGGCGTGAACTCC---GCCGTCCAGACC---------TTCGCCGTCGAGCCGAGTGTCCAGCAGAAGCTGGAGCAACGTATTCAGGAGTCCAGCGAGTTCCTGAAGCAGATCAACGTCTACGGCGTCGACGAGCTGCAGGGCGAGAAGATCGGCATCGGCGTCAGCGGCACCATCGCCAGCCGTACCGATACCACTGGCGACGGTGTACGCAAGCCGCGCGACGTGTCCGCGCTCGACAACCAGCGTTACGAGTGCAAGCACACCGACTTCGACACCGCAATCACCTACGCCATGCTCGACGCCTGGGCCAAG---TTCCCCGAGTTCCAGGCCCTGCTGCGCGACGCGATCCTCAAGCGCCAGGCCCTCGACCGCCTGATGATCGGCTTCAACGGCACCAGCGCCGCGGCTACCACCAACCGCGCCGCCAACCCGCTGCTGCAGGACGTGAACATTGGCTGGTTCCAGCAGTACCGCAACAACGCTCCGGCACGGGTACTG------------AAG---GAAGGGAAGACCACCGGCAAGGTG---------GTAGTCGGCAACGGCGCCGACGCCGACTACAAGAACCTCGACGCCCTGGTGTTCGACGTGGTCAGCAGCCTGATCGATCCCTGGCACCGCCGTGACCCGGGCCTGGTGGTGATCCTCGGCCGCGAGCTGGTCCACGACAAGTACTTCCCGATGGTGAACAAGGAC---CAGCCGGCAACCGAGAAGATCGCCACCGACCTCATCCTGTCGCAGAAGCGCATGGGCGGCCTGCCGCCGGTGGAAGTGCCCTACGTGCCCGAGAAGGGCCTCATGGTCACCACCCTGAAGAACCTGTCGCTCTACTGGCAGATCGGCGGTCGCCGCCGCTACCTGAAGGAGGTACCGGAGAAGAACCGCATCGAGAACTACGAGTCCAGCAACGACGCCTACGTCGTCGAGGACTACGGCCTCGGCTGCCTGGTCGAGAACATCGAAGTC
TRN  11011101101011011
NAM  Q48277_HAESO/6-337
ASQ  AQTLMNYIQGISNDNQEDFSRIARGAKFNVTPSVQQRLENAVQESSDFLKLINIVPVDEQQGEILGLGVSGTIAGTTDTN-ATGRKTQAIHALNKIPYHCQQINYDTHLKYAILDMWAK-FPDFAKRIGTLKAERMALDRIMIGFNGTSRAATSNRATNPLLQDVAVGWLKKIEDNAPERVM----TEDKKSSGKI---EVG--EGKTYKNLDALVFSAVSDLIAPQFQDDTKLVAIMSRDLLADKYFPLLNQS--KASEQVAGDIIMSTKRVGGLQAVQAPFVPKGTILITRLDNLSIYYQEGAMRRTLKDNAEYDRYEDYTSSNDDFVVENYESVALLKNINM
DSQ  GCACAAACATTAATGAATTACATTCAAGGTATTTCAAACGATAACCAAGAGGATTTCTCAAGAATTGCAAGAGGGGCGAAATTTAATGTGACGCCAAGTGTACAGCAACGTCTTGAAAATGCAGTACAAGAAAGCTCGGATTTCCTAAAACTGATCAACATTGTACCGGTAGATGAACAACAAGGTGAAATCTTAGGGTTAGGCGTATCAGGTACCATTGCAGGAACAACAGATACCAAT---GCGACAGGACGTAAAACGCAAGCCATTCATGCGTTAAACAAAATTCCGTATCACTGCCAACAAATTAACTATGATACACATCTCAAATATGCCATCTTGGATATGTGGGCAAAA---TTCCCTGATTTCGCTAAACGCATCGGCACATTAAAAGCCGAACGCATGGCACTGGATAGAATTATGATCGGTTTTAACGGAACAAGTCGTGCAGCAACCTCTAATAGAGCAACAAACCCATTATTACAAGATGTCGCTGTAGGCTGGTTGAAAAAAATTGAAGACAATGCACCTGAACGTGTCATG------------ACAGAAGACAAAAAGTCCAGCGGAAAAATT---------GAAGTCGGG------GAAGGAAAAACATACAAAAATTTAGATGCCCTTGTGTTTTCTGCTGTCAGCGATTTAATCGCACCTCAATTCCAAGATGACACGAAATTAGTCGCCATTATGAGCCGTGATTTGCTGGCTGATAAATACTTCCCTCTGCTCAATCAAAGC------AAGGCGAGTGAACAAGTTGCCGGTGATATTATTATGAGTACAAAACGAGTAGGCGGATTACAAGCCGTTCAAGCCCCTTTTGTACCAAAAGGCACCATCTTAATTACCCGACTTGATAACCTGTCAATCTATTACCAAGAAGGGGCAATGCGTCGAACATTAAAAGATAATGCAGAATATGACCGCTATGAAGATTACACCTCTTCTAATGATGACTTTGTCGTCGAAAACTATGAAAGTGTGGCATTGTTAAAAAATATCAACATG
TRN  10010101100011000
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