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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF05119 - Terminase_4)
FAM  PF05119
PID  Terminase_4
DES  Phage terminase, small subunit
IPR  IPR006448
ANO  15
ALN  122
AID  0.240834
APH  (((((((((Q37836_BPPHC/41-139:1.55077,((Q9B019_9VIRU/49-151:0.47107,Q9RIG7_XENNE/45-144:0.88060):0.21167,Q9XJT7_BPD3/46-122:1.19091):0.13276):0.07352,(Q97HW1_CLOAB/52-146:0.40206,Q9ZXG2_BPPH1/49-156:1.02584):0.30820):0.16056,O80040_9CAUD/49-147:1.00294):0.17481,(O06612_MYCTU/48-148:0.49383,P71949_MYCTU/96-196:0.88658):0.44940):0.17051,Q9L8N2_HAEIN/17-115:0.88016):0.37126,O87768_LACLC/21-120:0.69314):0.17727,Q9AZM7_9CAUD/26-139:0.33145):0.11871,Q9MCK9_9CAUD/26-140:0.34512):0.19470,Q9T1G0_9CAUD/22-136:0.51931,Q9B0E4_9CAUD/1-101:1.64129);
ATP  (((((((((Q37836_BPPHC/41-139,((Q9B019_9VIRU/49-151,Q9RIG7_XENNE/45-144),Q9XJT7_BPD3/46-122)),(Q97HW1_CLOAB/52-146,Q9ZXG2_BPPH1/49-156)),O80040_9CAUD/49-147),(O06612_MYCTU/48-148,P71949_MYCTU/96-196)),Q9L8N2_HAEIN/17-115),O87768_LACLC/21-120),Q9AZM7_9CAUD/26-139),Q9MCK9_9CAUD/26-140),Q9T1G0_9CAUD/22-136,Q9B0E4_9CAUD/1-101);
ATL  14.9694
DNO  15
DLN  366
DID  0.379063
DPH  ((((((Q97HW1_CLOAB/52-146:0.40862,(O80040_9CAUD/49-147:0.51147,Q9ZXG2_BPPH1/49-156:0.66767):0.08952):0.07735,(Q9B019_9VIRU/49-151:0.38609,(((Q37836_BPPHC/41-139:0.66437,(O06612_MYCTU/48-148:0.41755,P71949_MYCTU/96-196:0.47225):0.09649):0.19101,Q9XJT7_BPD3/46-122:0.57923):0.26615,Q9RIG7_XENNE/45-144:0.46742):0.13638):0.20891):0.24392,Q9L8N2_HAEIN/17-115:0.55440):0.13052,O87768_LACLC/21-120:0.42086):0.18344,Q9AZM7_9CAUD/26-139:0.32043):0.12227,(Q9B0E4_9CAUD/1-101:0.75506,Q9T1G0_9CAUD/22-136:0.44312):0.08086,Q9MCK9_9CAUD/26-140:0.22336);
DTP  ((((((Q97HW1_CLOAB/52-146,(O80040_9CAUD/49-147,Q9ZXG2_BPPH1/49-156)),(Q9B019_9VIRU/49-151,(((Q37836_BPPHC/41-139,(O06612_MYCTU/48-148,P71949_MYCTU/96-196)),Q9XJT7_BPD3/46-122),Q9RIG7_XENNE/45-144))),Q9L8N2_HAEIN/17-115),O87768_LACLC/21-120),Q9AZM7_9CAUD/26-139),(Q9B0E4_9CAUD/1-101,Q9T1G0_9CAUD/22-136),Q9MCK9_9CAUD/26-140);
DTL  9.17812
RID  0.240834
RPH  (((((((((Q37836_BPPHC/41-139:1.55077,((Q9B019_9VIRU/49-151:0.47107,Q9RIG7_XENNE/45-144:0.88060):0.21167,Q9XJT7_BPD3/46-122:1.19091):0.13276):0.07352,(Q97HW1_CLOAB/52-146:0.40206,Q9ZXG2_BPPH1/49-156:1.02584):0.30820):0.16056,O80040_9CAUD/49-147:1.00294):0.17481,(O06612_MYCTU/48-148:0.49383,P71949_MYCTU/96-196:0.88658):0.44940):0.17051,Q9L8N2_HAEIN/17-115:0.88016):0.37126,O87768_LACLC/21-120:0.69314):0.17727,Q9AZM7_9CAUD/26-139:0.33145):0.11871,Q9MCK9_9CAUD/26-140:0.34512):0.19470,Q9T1G0_9CAUD/22-136:0.51931,Q9B0E4_9CAUD/1-101:1.64129);
RTP  (((((((((Q37836_BPPHC/41-139,((Q9B019_9VIRU/49-151,Q9RIG7_XENNE/45-144),Q9XJT7_BPD3/46-122)),(Q97HW1_CLOAB/52-146,Q9ZXG2_BPPH1/49-156)),O80040_9CAUD/49-147),(O06612_MYCTU/48-148,P71949_MYCTU/96-196)),Q9L8N2_HAEIN/17-115),O87768_LACLC/21-120),Q9AZM7_9CAUD/26-139),Q9MCK9_9CAUD/26-140),Q9T1G0_9CAUD/22-136,Q9B0E4_9CAUD/1-101);
RTL  14.9694
LNK  O06612_MYCTU/48-148:O06612:BX842577
LNK  O80040_9CAUD/49-147:O80040:AB009866
LNK  O87768_LACLC/21-120:O87768:AJ223962
LNK  P71949_MYCTU/96-196:P71949:BX842580
LNK  Q37836_BPPHC/41-139:Q37836:X91149
LNK  Q97HW1_CLOAB/52-146:Q97HW1:AE007697
LNK  Q9AZM7_9CAUD/26-139:Q9AZM7:AF323670
LNK  Q9B019_9VIRU/49-151:Q9B019:AF311659
LNK  Q9B0E4_9CAUD/1-101:Q9B0E4:AB045978
LNK  Q9L8N2_HAEIN/17-115:Q9L8N2:AF198256
LNK  Q9MCK9_9CAUD/26-140:Q9MCK9:AF145054
LNK  Q9RIG7_XENNE/45-144:Q9RIG7:AJ133022
LNK  Q9T1G0_9CAUD/22-136:Q9T1G0:AJ131519
LNK  Q9XJT7_BPD3/46-122:Q9XJT7:AF165214
LNK  Q9ZXG2_BPPH1/49-156:Q9ZXG2:AB016282
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9ZXG2_BPPH1/49-156
ASQ  LKREFKKIADELKNIGIMTNLDVDALARFLFAQKQYLEMTEVL-----LETPITALVEDDDGN---------KFEVANKTYSDLLinqdklfKQCRQASSDLGLTISSRCKLVIPKKDDGKP
DSQ  TTAAAAAGAGAGTTTAAAAAGATAGCGGATGAGCTAAAAAACATCGGAATTATGACTAATTTAGATGTGGACGCGCTTGCCCGTTTTTTGTTTGCTCAAAAACAATACTTGGAAATGACCGAAGTCTTA---------------CTCGAAACGCCCATTACTGCATTAGTTGAGGATGATGACGGAAAT---------------------------AAATTTGAAGTAGCGAACAAGACATACAGTGATTTGCTTatcaatcaagacaagctgttcAAACAATGCCGGCAAGCCTCTAGTGATTTAGGGCTGACCATTTCCTCTCGCTGTAAACTTGTTATCCCGAAAAAAGATGATGGGAAACCG
TRN  10010101100011010
NAM  Q97HW1_CLOAB/52-146
ASQ  AQKEFKRLAKLLIEVELMTDADITHLALYCDAYSQYLSFKAQVKKHGMWIED--------------------KPNPFIKKMSDMV.......SQLRSLSSDLGLNPSARAKLAINFKEPNED
DSQ  GCTCAAAAAGAGTTTAAAAGACTTGCAAAGTTGCTAATTGAGGTCGAATTAATGACTGATGCTGATATTACACACCTTGCATTATATTGTGATGCATATTCTCAGTATCTTTCATTTAAAGCACAAGTAAAAAAACATGGTATGTGGATTGAAGAT------------------------------------------------------------AAACCTAATCCTTTTATAAAAAAGATGTCTGATATGGTT.....................AGTCAACTAAGATCACTTTCTTCGGACTTAGGGTTAAATCCTTCGGCACGTGCTAAGTTAGCAATCAATTTTAAAGAACCAAATGAAGAT
TRN  10010101110011000
NAM  Q9XJT7_BPD3/46-122
ASQ  ARLAWKELCTQ-SIKGVLTGSDRIILEVTANLLAEY------------------------------------RADPTEFAVGKYT.......-HLIGNLARLGLTPSDRQKFGLEKPKEKDE
DSQ  GCTCGTCTCGCATGGAAAGAGTTGTGCACTCAG---TCGATCAAGGGCGTTCTGACGGGATCGGACCGGATCATCCTGGAGGTCACCGCGAACCTGCTTGCTGAATAC------------------------------------------------------------------------------------------------------------CGCGCCGATCCGACTGAGTTCGCGGTTGGCAAGTACACC.....................---CACCTGATCGGAAATCTGGCCCGGCTTGGACTAACGCCGTCCGACCGCCAGAAGTTCGGCCTGGAAAAGCCGAAGGAGAAGGACGAG
TRN  11011101101011011
NAM  Q9RIG7_XENNE/45-144
ASQ  GRYWHERIAGELDKVGVLTRLDAKALELLIEAYVEYRTHCDTLETEGYTYRTDQGL---------------IKAHPAAGMKADAW.......KRIHAMLSAFGMSPSSRSRVNIAGENKDDP
DSQ  GGCCGGTACTGGCACGAACGGATCGCCGGAGAACTGGATAAAGTCGGTGTACTGACCCGCCTTGACGCTAAGGCTCTTGAATTACTGATTGAAGCCTACGTCGAATACAGAACGCATTGCGACACCCTGGAAACAGAAGGCTACACCTACCGCACCGATCAGGGATTA---------------------------------------------ATCAAGGCTCATCCGGCGGCAGGCATGAAAGCCGATGCGTGG.....................AAACGCATTCATGCCATGCTGAGCGCGTTCGGTATGTCGCCCTCCAGTCGATCCAGGGTCAATATCGCCGGGGAAAATAAAGATGATCCG
TRN  10010101100011010
NAM  Q9B019_9VIRU/49-151
ASQ  AKETWERLTLLLNSMGVLTIADAFALERLCDIYAEYLRYRVLIESNGETFEVHSQ-----NGVL-------IKANPAVSMLSDAD.......KRFKSYLVEFGLTPAARTKVRTHDKEKKPD
DSQ  GCAAAAGAAACCTGGGAGCGGCTAACGCTGCTGTTAAATAGCATGGGCGTATTAACGATTGCCGATGCTTTTGCACTGGAAAGGCTGTGTGATATTTACGCTGAGTATCTGCGGTATCGCGTCTTGATAGAGAGCAACGGTGAAACGTTTGAGGTGCATTCTCAA---------------AACGGCGTATTA---------------------ATCAAGGCGAATCCAGCCGTTTCGATGCTGTCGGATGCGGAT.....................AAACGCTTTAAAAGCTATCTGGTTGAATTTGGCTTAACACCCGCCGCAAGAACCAAGGTGAGGACGCATGACAAAGAAAAAAAACCGGAC
TRN  10010101100011010
NAM  Q9T1G0_9CAUD/22-136
ASQ  GKYLWPKLTAYLNKSNKIIRADEYLIQQYCSAYDIYRQAYEDLQKHGIQQKVYKTSLSPVDGSVVSRDFQGFKKNPAYNMMSDSL.......GRLNTIGKQLGLSPQARSKLMELAGPEEDK
DSQ  GGTAAATATTTATGGCCTAAATTAACTGCATATTTGAATAAAAGCAATAAGATTATTCGGGCAGACGAGTATTTAATTCAGCAATATTGTTCTGCATATGATATTTACAGACAAGCTTATGAAGACCTACAGAAACACGGTATTCAGCAAAAAGTCTATAAGACTTCTCTCTCACCTGTGGATGGTTCAGTGGTCAGCCGTGATTTTCAGGGTTTCAAAAAGAACCCTGCTTACAATATGATGTCTGACTCATTA.....................GGACGGCTTAATACAATAGGTAAGCAATTAGGATTAAGCCCACAGGCTAGAAGTAAACTGATGGAGCTAGCAGGACCTGAGGAAGATAAG
TRN  10010101100011000
NAM  Q9MCK9_9CAUD/26-140
ASQ  ARETWRKIVPFLETTEKVERIDTFLVETYCTNYELYKSAYEDIKENGIQQEIKKPIQAQGSGEILGEQSMGFKKNPAVATMKDAT.......ETLNKIGIQLGLTPKGRAELAEIAGSQADN
DSQ  GCGAGGGAAACTTGGCGCAAAATCGTTCCGTTTTTAGAAACTACTGAAAAGGTCGAACGAATTGATACATTCCTAGTTGAAACATACTGTACTAACTATGAACTTTACAAATCAGCGTATGAAGATATTAAGGAAAATGGGATTCAGCAGGAAATTAAAAAGCCGATTCAAGCCCAAGGCTCTGGTGAAATTCTTGGTGAACAATCAATGGGCTTTAAAAAGAATCCAGCAGTGGCAACTATGAAAGATGCTACT.....................GAAACGCTTAACAAGATAGGTATTCAGTTAGGTTTGACTCCTAAAGGAAGGGCTGAATTAGCTGAAATAGCAGGAAGTCAAGCGGATAAT
TRN  10010101110011000
NAM  Q9AZM7_9CAUD/26-139
ASQ  AKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKPVQDM-TGEIIDRQFQGFKRNPMTQIYSDAI.......KNLTKIGSELGLSPKSRSELMGLNMQEDEE
DSQ  GCAAAACAAATTTGGCGTAGAGTTGTCCTTTTTTTAGAAACACAAAAGCCTGTAGAACGAATTGACCAAACATTGGTTGAAATGTATTGCACTCAGTATGAAATTTATAGAAATTCATACGAACATCTTAAAAAACATGGTGAGGTTCAAGAAATTTATAAACCAGTTCAAGATATG---ACTGGTGAAATTATTGATAGACAGTTCCAAGGATTTAAACGTAATCCAATGACTCAAATTTACTCTGATGCAATA.....................AAAAATCTTACAAAGATTGGTTCTGAATTAGGCTTATCTCCAAAATCTCGTTCAGAGTTAATGGGATTGAATATGCAGGAAGATGAAGAA
TRN  10010101110011000
NAM  O87768_LACLC/21-120
ASQ  ARYMWRRIVPLLNEQYDVNLLDRTLIESLCINYQIFRDSYESIKKN-------KTQYITENGLI--------KSNTAVSDIDKAS.......KNIKAACDALGMTPKSRSDLLNLPKVVEEN
DSQ  GCAAGATATATGTGGCGGAGAATCGTTCCGCTACTTAATGAGCAGTACGATGTTAATTTATTAGATAGAACTCTTATAGAATCTTTATGCATAAATTATCAAATATTTAGAGATTCTTATGAGTCTATCAAGAAAAAT---------------------AAAACTCAATACATTACAGAAAATGGATTGATA------------------------AAATCCAATACGGCAGTTTCTGATATTGACAAGGCAAGT.....................AAAAATATCAAAGCAGCTTGCGACGCTTTAGGAATGACGCCTAAAAGTAGAAGTGACCTGTTAAATTTGCCGAAAGTTGTTGAAGAAAAT
TRN  10010101100011010
NAM  Q9L8N2_HAEIN/17-115
ASQ  AKSQWKARITQLSYRGDIKPEDLTNLEIYCINYSLFRSAVADIAKNGFSIVNSQGTQ---------------SRNPALSAKADAE.......KVMIKMSALLGFDPVSRRK-NPVETDVTDM
DSQ  GCTAAAAGCCAATGGAAAGCACGCATTACGCAGCTTTCGTATCGTGGCGATATTAAACCGGAAGATTTAACCAATCTTGAAATCTACTGTATTAATTATTCACTATTCCGAAGTGCGGTAGCGGATATTGCGAAAAACGGCTTTTCCATTGTAAACAGCCAGGGTACACAG---------------------------------------------TCACGCAATCCGGCACTTTCAGCGAAAGCCGATGCGGAA.....................AAAGTGATGATCAAGATGTCCGCACTTTTGGGCTTTGACCCGGTAAGTCGCCGTAAA---AATCCAGTAGAAACGGACGTTACTGATATG
TRN  11011101111011000
NAM  P71949_MYCTU/96-196
ASQ  AKDMWGRVVPELAALNLLKESDLGVLTSFCVAWDQLMQAVTAYREQGFIATNARSRRVT--------------VHPAVAAARAAT.......RDVLVLARELGCTPSAEANLAAVLAAAGDP
DSQ  GCTAAAGACATGTGGGGGCGCGTCGTTCCCGAGCTTGCGGCATTAAACCTGCTGAAGGAGTCCGACCTTGGGGTGCTGACCTCCTTCTGCGTCGCCTGGGATCAGCTCATGCAGGCTGTAACAGCCTACCGTGAACAGGGTTTCATCGCGACGAACGCCCGCAGCCGACGGGTGACG------------------------------------------GTGCATCCTGCCGTGGCCGCGGCCCGGGCCGCGACG.....................AGGGACGTTTTGGTGCTCGCGCGCGAATTGGGGTGCACGCCAAGCGCTGAGGCGAATTTGGCTGCTGTGCTGGCGGCGGCGGGGGACCCC
TRN  10010101100011010
NAM  O06612_MYCTU/48-148
ASQ  ALAEWRRVAPTLERLDLLKPEDRALLSAYCETWSVYVAAVQRVRAEGL------TITSPKSGVV--------HRNPAVTVAETAR.......MHLLRLASEFGLTPAAEQRLAVAPGDDGDG
DSQ  GCGCTGGCCGAATGGCGGCGCGTCGCACCGACTTTGGAGCGGCTTGACCTGCTCAAACCTGAGGATCGGGCGCTCCTGTCCGCGTACTGCGAGACCTGGTCCGTCTACGTCGCGGCGGTTCAGCGGGTCCGCGCCGAAGGCCTC------------------ACAATTACCTCACCGAAATCCGGTGTCGTG------------------------CACCGGAACCCGGCGGTGACGGTTGCGGAGACGGCGCGC.....................ATGCATCTGCTGCGCTTGGCCTCCGAGTTTGGCCTGACCCCGGCCGCCGAGCAGCGACTGGCGGTGGCGCCGGGCGACGACGGCGACGGG
TRN  11011101101011001
NAM  O80040_9CAUD/49-147
ASQ  AKQEYLRILPHMQEL-PISNLDKAQLAQYCSFYSDFVKASLILEREDLILEDDKGNQ---------------KVNPAFNIKEKAG.......IRLQQTANTLGLTIDSRLRIMVPDEKEDDD
DSQ  GCGAAACAAGAATACTTAAGAATATTACCGCACATGCAAGAATTG---CCAATTTCCAACTTAGATAAAGCACAATTAGCACAATATTGTAGTTTTTATAGTGACTTTGTTAAAGCAAGTTTGATTTTAGAGCGCGAAGACTTGATTTTAGAAGACGACAAAGGAAATCAA---------------------------------------------AAGGTTAATCCGGCGTTCAACATAAAGGAAAAAGCGGGT.....................ATTCGATTGCAACAAACAGCTAATACTTTAGGATTAACTATTGATAGCCGATTGCGTATTATGGTTCCTGATGAAAAAGAAGATGATGAT
TRN  10010101110011010
NAM  Q37836_BPPHC/41-139
ASQ  GKDVWRNVWQA-GMGAYSPDTDRNVILRYCELHDRRADLLSLIEADGYMSEGYNGQPV---------------AHPMLRYVESTE.......KELRSIETAIGFTPEARMRLGIVAAEARKV
DSQ  GGCAAGGACGTATGGCGGAACGTGTGGCAAGCC---GGTATGGGCGCCTACTCCCCCGACACGGACCGGAACGTGATCTTGCGTTACTGCGAGCTTCACGACCGTCGCGCCGACCTGTTGTCGCTCATCGAAGCCGACGGGTACATGTCTGAGGGTTACAACGGTCAGCCGGTC---------------------------------------------GCGCACCCGATGCTTCGCTATGTCGAGTCGACTGAG.....................AAAGAGCTTCGGTCGATAGAGACGGCAATCGGCTTCACGCCTGAAGCGCGTATGCGCCTGGGCATCGTTGCCGCTGAAGCCCGGAAGGTT
TRN  10010101100011011
NAM  Q9B0E4_9CAUD/1-101
ASQ  MKLTKKQLKEYIEDYK---KSDGILINLYIETYEFYCRLRDELK-NSDLM--IEHTNKAGASNIV--------KNPLSIELTKTV.......QTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
DSQ  ATGAAGTTAACAAAAAAACAGCTAAAAGAATATATAGAAGATTACAAA---------AAATCTGATGGCATATTAATTAATTTGTATATAGAAACGTATGAATTTTATTGTCGGTTAAGAGATGAACTTAAA---AATAGTGATTTGATG------ATAGAGCATACAAACAAGGCTGGTGCGAGCAATATTGTT------------------------AAGAATCCATTAAGCATAGAACTGACAAAAACAGTT.....................CAAACACTAAATAACTTACTCAAGTCTATGGGTTTAACTGCAGCACAAAGAAAAAAGATAGTTCAAGAAGAAGGTGGTTTTGGTGACTAT
TRN  10010101100011010
//