pan•dit

PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF05002
PID  SGS
DES  SGS domain
IPR  IPR007699
ANO  11
ALN  94
AID  0.409217
APH  (((((Q18949_CAEEL/115-196:0.39360,(Q9VHT3_DROME/96-176:0.45950,SUGT1_HUMAN/252-333:0.10353):0.17571):0.03703,Q9N8L0_9TRYP/142-219:0.37517):0.03716,(Q9SE32_ORYSA/284-365:0.08189,((Q9P6Y5_NEUCR/390-464:0.54599,SGT1_YEAST/320-395:0.27348):0.11396,GIT7_SCHPO/300-379:0.28290):0.24692):0.11185):0.73511,Q9W3Y3_DROME/152-220:0.61549):0.09452,CYBP_MOUSE/162-229:0.41697,Q9C8R4_ARATH/158-222:0.85256);
ATP  (((((Q18949_CAEEL/115-196,(Q9VHT3_DROME/96-176,SUGT1_HUMAN/252-333)),Q9N8L0_9TRYP/142-219),(Q9SE32_ORYSA/284-365,((Q9P6Y5_NEUCR/390-464,SGT1_YEAST/320-395),GIT7_SCHPO/300-379))),Q9W3Y3_DROME/152-220),CYBP_MOUSE/162-229,Q9C8R4_ARATH/158-222);
ATL  6.00371
DNO  11
DLN  282
DID  0.496585
DPH  (((((Q18949_CAEEL/115-196:0.32613,SUGT1_HUMAN/252-333:0.23975):0.04095,((Q9VHT3_DROME/96-176:0.32157,Q9P6Y5_NEUCR/390-464:0.36477):0.10908,Q9N8L0_9TRYP/142-219:0.35714):0.15338):0.04289,((SGT1_YEAST/320-395:0.26697,GIT7_SCHPO/300-379:0.25901):0.20391,Q9SE32_ORYSA/284-365:0.19915):0.02186):0.36818,CYBP_MOUSE/162-229:0.41600):0.07851,Q9W3Y3_DROME/152-220:0.51876,Q9C8R4_ARATH/158-222:0.41930);
DTP  (((((Q18949_CAEEL/115-196,SUGT1_HUMAN/252-333),((Q9VHT3_DROME/96-176,Q9P6Y5_NEUCR/390-464),Q9N8L0_9TRYP/142-219)),((SGT1_YEAST/320-395,GIT7_SCHPO/300-379),Q9SE32_ORYSA/284-365)),CYBP_MOUSE/162-229),Q9W3Y3_DROME/152-220,Q9C8R4_ARATH/158-222);
DTL  4.70731
RID  0.409217
RPH  (((((Q18949_CAEEL/115-196:0.39360,(Q9VHT3_DROME/96-176:0.45950,SUGT1_HUMAN/252-333:0.10353):0.17571):0.03703,Q9N8L0_9TRYP/142-219:0.37517):0.03716,(Q9SE32_ORYSA/284-365:0.08189,((Q9P6Y5_NEUCR/390-464:0.54599,SGT1_YEAST/320-395:0.27348):0.11396,GIT7_SCHPO/300-379:0.28290):0.24692):0.11185):0.73511,Q9W3Y3_DROME/152-220:0.61549):0.09452,CYBP_MOUSE/162-229:0.41697,Q9C8R4_ARATH/158-222:0.85256);
RTP  (((((Q18949_CAEEL/115-196,(Q9VHT3_DROME/96-176,SUGT1_HUMAN/252-333)),Q9N8L0_9TRYP/142-219),(Q9SE32_ORYSA/284-365,((Q9P6Y5_NEUCR/390-464,SGT1_YEAST/320-395),GIT7_SCHPO/300-379))),Q9W3Y3_DROME/152-220),CYBP_MOUSE/162-229,Q9C8R4_ARATH/158-222);
RTL  6.00371
LNK  CYBP_MOUSE/162-229:Q9CXW3:BC025948
LNK  GIT7_SCHPO/300-379:O59709:AL023589
LNK  Q18949_CAEEL/115-196:Q18949:Z74030
LNK  Q9C8R4_ARATH/158-222:Q9C8R4:AC022455
LNK  Q9N8L0_9TRYP/142-219:Q9N8L0:AL929605
LNK  Q9P6Y5_NEUCR/390-464:Q9P6Y5:AL353820
LNK  Q9SE32_ORYSA/284-365:Q9SE32:AF192467
LNK  Q9VHT3_DROME/96-176:Q9VHT3:AE003678
LNK  Q9W3Y3_DROME/152-220:Q9W3Y3:AE003438
LNK  SGT1_YEAST/320-395:Q08446:U88830
LNK  SUGT1_HUMAN/252-333:Q9Y2Z0:AF132856
AMK  xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  GIT7_SCHPO/300-379
ASQ  AKDWDSLAK----LADLEEDEP--...-----TGEAALANLFQNLYKNADDDTRRAMMKSYTESNGTALSTNWKDVKSKTFETKPPQGMEPKKF
DSQ  GCGAAGGATTGGGATTCGCTAGCAAAG------------CTGGCAGATTTGGAAGAAGACGAACCT------.........---------------ACTGGAGAAGCTGCTTTGGCTAACTTATTTCAAAATCTGTACAAGAACGCCGATGATGACACCCGAAGAGCTATGATGAAAAGCTATACAGAAAGTAACGGCACTGCTTTATCAACTAACTGGAAAGATGTGAAAAGCAAAACATTTGAAACAAAGCCTCCACAGGGAATGGAACCAAAAAAATTT
TRN  10010101100011000
NAM  SGT1_YEAST/320-395
ASQ  KIDWSKLDI------D---EEA--...-DEE-AGSA--DSFFQKLYAGADPDTKRAMMKSFIESNGTALSTDWEDVSKGTVKTSPPEGMEPKHW
DSQ  AAAATAGATTGGTCTAAACTTGACATT------------------GAT---------GAAGAAGCT------.........---GATGAAGAA---GCGGGATCGGCT------GATAGTTTCTTTCAAAAGCTTTACGCTGGAGCGGATCCAGATACCAAAAGGGCTATGATGAAATCCTTTATAGAAAGTAATGGTACTGCATTGAGTACAGACTGGGAAGACGTATCTAAGGGAACGGTTAAAACTTCACCACCAGAAGGCATGGAACCTAAACATTGG
TRN  10010101110011001
NAM  Q9P6Y5_NEUCR/390-464
ASQ  PKNWDSLPV------D--------...-DDKEDGQD-INGFFKTLYKGSTPEQQRAMMKSFLESNGTTLSTNWDEVKDKVVPTVPPEGVEPKPW
DSQ  CCTAAAAACTGGGACAGCCTGCCTGTC------------------GAT------------------------.........---GACGACAAGGAGGATGGCCAGGAT---ATCAATGGCTTTTTCAAAACTCTTTACAAGGGTAGTACGCCTGAACAGCAGCGTGCCATGATGAAGAGCTTCCTCGAGAGCAATGGCACGACGCTGAGCACCAACTGGGATGAGGTTAAGGATAAGGTCGTTCCCACGGTGCCCCCGGAGGGAGTCGAGCCCAAGCCGTGG
TRN  11011101101011011
NAM  Q9SE32_ORYSA/284-365
ASQ  KKDWDKLEA------EVKKEEK--...-EEKLEGDAALNKFFRDIYSDADEDMRRAMMKSFVESNGTVLSTNWKDVGSKKVEGSPPDGMELKKW
DSQ  AAGAAAGACTGGGATAAACTGGAAGCT------------------GAAGTTAAAAAGGAGGAGAAG------.........---GAGGAGAAGCTTGAAGGCGATGCTGCATTGAACAAATTTTTCCGTGACATCTACAGTGATGCTGATGAAGACATGCGACGAGCAATGATGAAATCTTTTGTTGAATCTAACGGTACTGTTCTGTCGACCAATTGGAAAGATGTTGGCTCGAAGAAGGTAGAGGGAAGCCCACCTGATGGGATGGAGCTTAAGAAATGG
TRN  11011101101011011
NAM  SUGT1_HUMAN/252-333
ASQ  TRNWDKLVG------EIKEEEK--...-NEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY
DSQ  ACAAGAAATTGGGATAAATTGGTTGGT------------------GAGATCAAAGAAGAAGAAAAG------.........---AATGAAAAGTTGGAGGGAGATGCAGCTTTAAACAGATTATTTCAGCAGATCTATTCAGATGGTTCTGATGAAGTGAAACGTGCCATGAACAAATCCTTTATGGAGTCGGGTGGTACAGTTTTGAGTACCAACTGGTCTGATGTAGGTAAAAGGAAAGTTGAAATCAATCCTCCTGATGATATGGAATGGAAAAAGTAC
TRN  10110101110011000
NAM  Q9N8L0_9TRYP/142-219
ASQ  GRDWSA----------VKLDDD--...-DEKPEGDQALNALFQKIYGNGTDEQRRAMMKSFVESNGTVLSTNWADVGNRHVTTEPPTGMEEKKY
DSQ  GGCCGCGACTGGAGTGCT------------------------------GTAAAACTTGATGACGAT------.........---GATGAAAAACCAGAAGGGGACCAAGCACTGAACGCGCTTTTCCAGAAGATTTACGGCAACGGCACAGACGAGCAGCGCCGGGCCATGATGAAGTCCTTCGTGGAAAGCAACGGCACGGTGCTTTCCACGAACTGGGCTGACGTTGGAAACCGGCACGTAACCACAGAACCACCCACCGGAATGGAAGAAAAGAAGTAC
TRN  11011101101011011
NAM  Q18949_CAEEL/115-196
ASQ  KKNWDAIEK------QAVKEEE--...-DESLEGDAAVNKMFRKMYNDASDDVRRAMMKSYSESNGTVLSTNWSEIGQKKTECQPPACMEYKEY
DSQ  AAAAAGAATTGGGATGCTATCGAGAAA------------------CAAGCTGTAAAAGAAGAGGAA------.........---GATGAATCGCTGGAAGGTGATGCCGCTGTAAACAAAATGTTCCGTAAGATGTACAACGACGCTTCGGATGATGTCCGACGTGCCATGATGAAGAGCTATTCTGAATCAAATGGAACCGTCTTGTCTACAAATTGGTCTGAAATTGGTCAAAAGAAAACGGAATGTCAGCCACCAGCATGTATGGAATATAAGGAATAT
TRN  11011101101011001
NAM  Q9VHT3_DROME/96-176
ASQ  AKNWDQLVS------E---EEKID...EKEA-KGEAALTNLFKKIYSSSSPEVQKAMNKSFSESGGTVLSTNWNEVGKERVTVKPPNGTEFREW
DSQ  GCCAAGAACTGGGACCAGCTGGTCAGC------------------GAG---------GAGGAAAAGATCGAC.........GAGAAGGAGGCC---AAGGGCGAGGCGGCCCTCACCAACCTGTTCAAGAAAATCTACAGCTCATCCTCGCCCGAGGTCCAAAAGGCCATGAACAAGTCCTTCTCGGAGTCCGGAGGCACCGTGCTCAGCACCAACTGGAATGAGGTGGGCAAAGAAAGAGTCACCGTGAAGCCTCCAAATGGAACCGAGTTCCGCGAGTGG
TRN  10010101100011001
NAM  Q9C8R4_ARATH/158-222
ASQ  G-NWLDIHH---------KEDKIKpslEKEK-DPMAGIMGMMKNLYEDGDEEMKKTIAKAWTDAR----------------SGKAADP--LKGL
DSQ  GGA---AACTGGCTTGACATTCACCAC---------------------------AAAGAAGACAAGATTAAAccgagtttgGAGAAAGAGAAA---GACCCAATGGCTGGAATTATGGGGATGATGAAGAACTTGTATGAGGATGGAGATGAAGAAATGAAGAAGACAATAGCTAAAGCCTGGACAGATGCTAGG------------------------------------------------TCAGGCAAAGCAGCAGATCCT------TTAAAAGGACTA
TRN  10010101110011000
NAM  Q9W3Y3_DROME/152-220
ASQ  DKHWDVLTAIQKRLKQ-KKDSELS...KDGD-NPESALVNIMKKMYNDGDSKTKQMIAKAWTESQ-----------------DKAKLG---KET
DSQ  GACAAGCACTGGGATGTGCTCACCGCTATCCAGAAGCGTTTGAAGCAA---AAGAAGGACAGCGAATTGTCC.........AAAGATGGCGAC---AATCCCGAATCGGCGCTTGTTAACATCATGAAGAAGATGTACAACGACGGTGACTCCAAGACGAAGCAGATGATCGCCAAAGCTTGGACCGAGAGTCAG---------------------------------------------------GATAAGGCGAAGCTTGGC---------AAGGAGACG
TRN  11011101111011011
NAM  CYBP_MOUSE/162-229
ASQ  T-RWDYLTQVEKECKE--KEKP-S...YDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR----------------EKQARED---TEF
DSQ  ACA---AGATGGGACTACTTAACACAGGTGGAAAAGGAATGCAAAGAG------AAAGAAAAGCCT---TCC.........TACGACACGGAGGCAGACCCTAGTGAGGGATTAATGAATGTTCTAAAGAAAATTTATGAAGACGGAGACGATGATATGAAGCGAACCATTAATAAAGCGTGGGTGGAATCCAGA------------------------------------------------GAGAAGCAAGCCAGAGAAGAC---------ACGGAATTT
TRN  10010101110011010
//