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PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF04823
PID  Herpes_UL49_2
DES  Herpesvirus UL49 tegument protein
IPR  IPR006908
ANO  8
ALN  96
AID  0.430014
APH  ((((UL49_HHV11/163-256:0.59149,(Q9E206_9ALPH/144-239:0.30688,(UL49_EHV1B/162-257:0.30084,UL49_BHV1C/133-228:0.25025):0.14124):0.11327):0.18612,O56868_9ALPH/110-205:1.31357):0.32295,O89247_9ALPH/78-172:0.15782):0.07884,Q9DHC2_9ALPH/120-214:0.31268,Q69318_9ALPH/80-174:0.13253);
ATP  ((((UL49_HHV11/163-256,(Q9E206_9ALPH/144-239,(UL49_EHV1B/162-257,UL49_BHV1C/133-228))),O56868_9ALPH/110-205),O89247_9ALPH/78-172),Q9DHC2_9ALPH/120-214,Q69318_9ALPH/80-174);
ATL  4.20851
DNO  7
DLN  288
DID  0.478282
DPH  (UL49_BHV1C/133-228:0.39738,(((Q9DHC2_9ALPH/120-214:0.29950,Q69318_9ALPH/80-174:0.13266):0.11372,O89247_9ALPH/78-172:0.16183):0.38208,Q9E206_9ALPH/144-239:0.23854):0.17154,(O56868_9ALPH/110-205:0.96936,UL49_HHV11/163-256:0.37879):0.23232);
DTP  (UL49_BHV1C/133-228,(((Q9DHC2_9ALPH/120-214,Q69318_9ALPH/80-174),O89247_9ALPH/78-172),Q9E206_9ALPH/144-239),(O56868_9ALPH/110-205,UL49_HHV11/163-256));
DTL  3.47772
RID  0.416356
RPH  (Q9E206_9ALPH/144-239:0.29177,((UL49_HHV11/163-256:0.37778,O56868_9ALPH/110-205:1.37852):0.24316,((Q69318_9ALPH/80-174:0.12489,Q9DHC2_9ALPH/120-214:0.32190):0.07707,O89247_9ALPH/78-172:0.15942):0.47679):0.14966,UL49_BHV1C/133-228:0.35673);
RTP  (Q9E206_9ALPH/144-239,((UL49_HHV11/163-256,O56868_9ALPH/110-205),((Q69318_9ALPH/80-174,Q9DHC2_9ALPH/120-214),O89247_9ALPH/78-172)),UL49_BHV1C/133-228);
RTL  3.95769
LNK  O56868_9ALPH/110-205:O56868:Y14300
LNK  O89247_9ALPH/78-172:O89247:AB012572
LNK  Q69318_9ALPH/80-174:Q69318:L10283
LNK  Q9DHC2_9ALPH/120-214:Q9DHC2:AF291866
LNK  Q9E206_9ALPH/144-239:Q9E206:AF275348
LNK  UL49_BHV1C/133-228:P30022:Z54206
LNK  UL49_EHV1B/162-257:P28960:
LNK  UL49_HHV11/163-256:P10233:X14112
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  UL49_BHV1C/133-228
ASQ  PRAPPGANAVASGRPLAFSAAPKTPKAPWCGPTHAYNRTIFCEAVALVAAEYARQAAASVWDSDPPKSNERLDRMLKSAAIRILVCEGSGLLAAAN
DSQ  CCTCGCGCGCCCCCCGGTGCTAATGCTGTTGCGTCTGGCCGGCCGCTGGCGTTCAGCGCGGCTCCGAAAACGCCCAAGGCGCCCTGGTGTGGACCGACGCACGCCTACAACCGAACGATCTTTTGCGAGGCCGTCGCGCTCGTGGCCGCCGAGTACGCCCGGCAGGCGGCTGCCAGCGTCTGGGACTCGGACCCCCCAAAGAGCAACGAGCGATTGGATCGCATGTTGAAGTCGGCGGCAATTCGCATCCTCGTGTGCGAGGGCTCCGGGCTTCTCGCCGCCGCGAAC
TRN  11011101101011011
NAM  UL49_EHV1B/162-257
ASQ  QRASPGVNSIKSGKGLAFSGTPKTPKSQWYGATHLFNKNVFCAAVSRVAAAHASDAASALWDLNPPKTNEDLDRFLKAAAIRILVCEGAQLLEVAN
NAM  Q9E206_9ALPH/144-239
ASQ  KRAPPGAGAIASGRPLSFSTAPKNTTSAWCGPTPAYNKRVFCEAIRRIAAAQAQRAAEAAWSSNPPRNNAELDRLLAGTVVRITVHEGLNLIQVAN
DSQ  AAACGGGCCCCTCCAGGAGCAGGAGCAATTGCAAGCGGGCGGCCGTTATCTTTTAGCACAGCTCCTAAAAATACTACCAGTGCCTGGTGTGGTCCAACACCGGCATATAACAAACGCGTTTTCTGTGAAGCTATAAGGCGTATTGCTGCCGCACAAGCACAGCGAGCAGCTGAAGCTGCATGGAGTAGTAACCCTCCAAGAAATAACGCGGAATTAGACCGCCTTCTGGCCGGAACTGTCGTTAGAATAACTGTACATGAGGGTCTTAATTTAATCCAGGTAGCTAAC
TRN  10010101100011010
NAM  UL49_HHV11/163-256
ASQ  TRSKTPAQGLA--RKLHFSTAPPNPDAPWTPRVAGFNKRVFCAAVGRLAAMHARMAAVQLWDMSRPRTDEDLNELLGITTIRVTVCEGKNLLQRAN
DSQ  ACCCGATCCAAGACACCCGCGCAGGGGCTGGCC------AGAAAGCTGCACTTTAGCACCGCCCCCCCAAACCCCGACGCGCCATGGACCCCCCGGGTGGCCGGCTTTAACAAGCGCGTCTTCTGCGCCGCGGTCGGGCGCCTGGCGGCCATGCATGCCCGGATGGCGGCGGTCCAGCTCTGGGACATGTCGCGTCCGCGCACAGACGAAGACCTCAACGAACTCCTTGGCATCACCACCATCCGCGTGACGGTCTGCGAGGGCAAAAACCTGCTTCAGCGCGCCAAC
TRN  10010101100011011
NAM  Q69318_9ALPH/80-174
ASQ  PRTKPGVRAVQSNK-FAFSTAPSSASSTWRSNTVAFNQRMFCGAVATVAQYHAYQGALALWRQDPPRTNEELDAFLSRAVIKITIQEGPNLMGEAE
DSQ  CCCCGTACCAAGCCCGGGGTCAGAGCTGTACAAAGTAATAAA---TTCGCTTTCAGTACGGCTCCTTCATCAGCATCTAGCACTTGGAGATCAAATACAGTGGCATTTAATCAGCGTATGTTTTGCGGAGCGGTTGCAACTGTGGCTCAATATCACGCATACCAAGGCGCGCTCGCCCTTTGGCGTCAAGATCCTCCGCGAACAAATGAAGAATTAGATGCATTTCTTTCCAGAGCTGTCATTAAAATTACCATTCAAGAGGGTCCAAATTTGATGGGGGAAGCCGAA
TRN  10010101110011000
NAM  O89247_9ALPH/78-172
ASQ  VRAKPGARAIEKGK-FAFSTTPASATSTWRSNTLVYNERIFCGAVAAVAQYHAYRGALSLWRRNAPRTNAELEEFLARAIIKITIQEGANLLDEAE
DSQ  GTTCGTGCCAAACCCGGAGCCAGGGCAATAGAAAAAGGGAAA---TTTGCCTTTAGTACGACTCCGGCGTCAGCAACTAGTACCTGGCGATCAAACACGCTCGTCTATAACGAGCGTATATTCTGCGGAGCCGTAGCTGCTGTGGCCCAGTACCATGCATATAGGGGAGCGCTTTCCCTTTGGCGTCGGAACGCCCCGAGGACCAATGCGGAGCTCGAGGAATTCCTCGCCAGGGCTATAATCAAGATCACGATTCAAGAAGGGGCAAACCTATTGGATGAAGCTGAG
TRN  10010101110011001
NAM  Q9DHC2_9ALPH/120-214
ASQ  QRARPGVRAVQKNK-FMFSSAPTSRTSHWKSNTVAFNQHVFCCAVAAVARYHAFRGALALWNKEPPRTDEQLEDFLVRAVVKVTVREGPYLLEEAE
DSQ  CAACGAGCTCGCCCGGGGGTTCGGGCGGTGCAAAAAAATAAG---TTCATGTTCAGTAGCGCACCGACATCGCGTACCAGTCATTGGAAATCTAATACTGTAGCTTTTAACCAACATGTGTTTTGTTGCGCGGTTGCAGCAGTTGCTCGTTATCATGCATTCAGAGGCGCGCTTGCCCTGTGGAATAAAGAACCGCCGAGGACAGACGAACAGCTGGAGGACTTTCTAGTCAGAGCTGTAGTAAAGGTAACGGTTCGTGAAGGGCCATATTTATTGGAGGAAGCTGAA
TRN  10010101100011010
NAM  O56868_9ALPH/110-205
ASQ  NHCAGLMRRLTISKGFGPSATPSGDEDPWHTSTIPANRSAFVQAVSVTAMAQAELAAREVWDVTKPRTNRELRDMVRELEITIIINPGESLWSVAT
DSQ  AATCATTGCGCTGGCCTGATGCGACGTTTAACTATCTCTAAGGGATTTGGTCCTAGTGCTACACCCTCAGGGGATGAAGACCCATGGCATACTTCTACTATTCCAGCAAATCGTTCGGCCTTCGTGCAAGCCGTCTCTGTGACGGCAATGGCCCAGGCAGAATTGGCAGCGAGAGAGGTGTGGGACGTAACAAAACCACGCACGAATAGGGAGTTGAGGGATATGGTGAGAGAGCTAGAAATCACTATAATTATCAATCCGGGTGAATCTTTATGGTCTGTTGCCACT
TRN  10010101100011000
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