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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04347 - FliO)
FAM  PF04347
PID  FliO
DES  Flagellar biosynthesis protein, FliO
IPR  IPR007442
ANO  8
ALN  106
AID  0.378632
APH  ((((FLIO_SALTY/37-125:0.18881,FLIO_ECOLI/36-121:0.25464):0.27521,MOPB_ERWCA/49-139:0.40557):0.45704,(FLIP_BUCAI/41-130:1.05427,(Q9Z6F9_VIBPA/53-137:0.27006,Q9KQ77_VIBCH/42-129:0.13485):0.25432):0.23821):0.47824,FLIO_PSEAE/62-150:0.14098,Q9R9X6_PSEPU/55-144:0.49164);
ATP  ((((FLIO_SALTY/37-125,FLIO_ECOLI/36-121),MOPB_ERWCA/49-139),(FLIP_BUCAI/41-130,(Q9Z6F9_VIBPA/53-137,Q9KQ77_VIBCH/42-129))),FLIO_PSEAE/62-150,Q9R9X6_PSEPU/55-144);
ATL  4.64386
DNO  7
DLN  318
DID  0.455781
DPH  (MOPB_ERWCA/49-139:0.23213,(((FLIO_PSEAE/62-150:0.20480,Q9R9X6_PSEPU/55-144:0.24345):0.27902,(Q9Z6F9_VIBPA/53-137:0.26791,Q9KQ77_VIBCH/42-129:0.18377):0.20838):0.34065,FLIO_SALTY/37-125:0.33785):0.18944,FLIP_BUCAI/41-130:0.87024);
DTP  (MOPB_ERWCA/49-139,(((FLIO_PSEAE/62-150,Q9R9X6_PSEPU/55-144),(Q9Z6F9_VIBPA/53-137,Q9KQ77_VIBCH/42-129)),FLIO_SALTY/37-125),FLIP_BUCAI/41-130);
DTL  3.35764
RID  0.365297
RPH  (((FLIO_SALTY/37-125:0.47229,MOPB_ERWCA/49-139:0.39515):0.46324,(FLIP_BUCAI/41-130:1.07565,(Q9Z6F9_VIBPA/53-137:0.26426,Q9KQ77_VIBCH/42-129:0.14251):0.27106):0.22598):0.46232,FLIO_PSEAE/62-150:0.15339,Q9R9X6_PSEPU/55-144:0.48076);
RTP  (((FLIO_SALTY/37-125,MOPB_ERWCA/49-139),(FLIP_BUCAI/41-130,(Q9Z6F9_VIBPA/53-137,Q9KQ77_VIBCH/42-129))),FLIO_PSEAE/62-150,Q9R9X6_PSEPU/55-144);
RTL  4.40659
LNK  FLIO_ECOLI/36-121:P22586:
LNK  FLIO_PSEAE/62-150:Q51467:AE004574
LNK  FLIO_SALTY/37-125:P54699:L49021
LNK  FLIP_BUCAI/41-130:P57184:AP001118
LNK  MOPB_ERWCA/49-139:P34199:X72969
LNK  Q9KQ77_VIBCH/42-129:Q9KQ77:AE004285
LNK  Q9R9X6_PSEPU/55-144:Q9R9X6:AF031418
LNK  Q9Z6F9_VIBPA/53-137:Q9Z6F9:AF069392
AMK  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxx..xxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  MOPB_ERWCA/49-139
ASQ  AWLARKLGFAPQAKQN.KLLK---VVSSCPVGQRERVVIVEVDNTWLVLGVTAQQITPLHTL---PAQPTNdsssTGDTK-PVD-..-FNQLLKKVLKR---PEKS
DSQ  GCCTGGCTAGCTCGCAAACTCGGTTTTGCTCCCCAAGCCAAGCAAAAC...AAGTTGCTAAAA---------GTCGTATCCAGTTGCCCTGTCGGGCAGCGTGAACGTGTCGTTATTGTAGAAGTTGATAATACCTGGCTGGTGTTAGGTGTTACGGCTCAGCAAATCACGCCGCTGCATACACTT---------CCAGCACAACCAACCAACgacagttcctcaACTGGTGACACTAAG---CCGGTAGAT---......---TTCAATCAACTGTTAAAGAAAGTTTTAAAGCGT---------CCGGAAAAATCG
TRN  11011101101011000
NAM  FLIO_ECOLI/36-121
ASQ  AWLVKRLGFAPKRTGV.NGLK---ISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLP--PSAPT-....--EEI-PQT-..DFQSVMKNLLKR---SGRS
NAM  FLIO_SALTY/37-125
ASQ  AWVIKRMG-FAPKGNSvRGLK---VSASASLGPRERVVIVEVENARLVLGVTASQINLLHTL----P-PAE....NDTEA-PVAPpaDFQNMMKSLLKR---SGRS
DSQ  GCCTGGGTGATTAAGCGTATGGGA---TTCGCGCCAAAAGGAAATAGCgtcCGGGGACTGAAG---------GTGTCAGCCAGCGCCTCGCTTGGCCCGCGCGAACGCGTGGTGATTGTCGAGGTCGAAAATGCGCGCCTGGTACTGGGCGTGACCGCCTCGCAGATCAACCTGCTGCACACCCTG------------CCG---CCCGCGGAG............AATGACACGGAAGCA---CCCGTTGCCCCAccggcgGATTTCCAGAACATGATGAAGAGCTTACTCAAGCGT---------TCCGGGAGATCC
TRN  10010101100011000
NAM  Q9KQ77_VIBCH/42-129
ASQ  AWLLKRMR-VPAFGQQ.KGLS---IIKQLPVGTRERVMIIQVGEEQYLIGVTTQSIQLLAKL----DNPL-....IQEEL-PAT-..AFSNQLMQLLKKHETDSKT
DSQ  GCTTGGTTACTCAAACGCATGCGT---GTGCCTGCTTTCGGTCAGCAA...AAAGGGCTGAGT---------ATCATCAAACAGTTACCCGTTGGCACCCGAGAGCGGGTGATGATCATCCAAGTGGGCGAAGAGCAGTATTTGATTGGGGTGACCACTCAGTCAATTCAACTGCTGGCCAAACTC------------GATAATCCACTC---............ATACAGGAGGAGCTG---CCGGCAACC---......GCCTTTTCTAACCAGTTGATGCAGCTACTGAAAAAACATGAAACGGACTCAAAGACT
TRN  10010101100011000
NAM  Q9Z6F9_VIBPA/53-137
ASQ  AWLLKRMQ-VPALGQQ.KGLR---IVSQLPVGTKERIAVVQVGEEQFLVGITSQSIQTLAKL----EKPL-....-KEEE-LATN..AFASQFSQLIKK---NDKG
DSQ  GCTTGGTTGCTTAAACGCATGCAA---GTGCCGGCGTTAGGGCAGCAA...AAAGGTTTACGC---------ATCGTGAGCCAATTACCTGTCGGCACCAAAGAGCGAATCGCTGTGGTTCAGGTTGGAGAAGAGCAGTTTTTGGTGGGCATCACCAGTCAATCGATCCAAACCTTAGCCAAGCTA------------GAAAAGCCATTG---............---AAAGAGGAAGAG---TTGGCGACCAAT......GCTTTTGCCAGTCAGTTCAGCCAACTGATCAAGAAA---------AATGACAAAGGG
TRN  11011101101011010
NAM  Q9R9X6_PSEPU/55-144
ASQ  AWLLRRLQSTAVKGGQ.VIEI---VGSR-AIGPRDRLLLVQVGKEQILIGHTPGTIEALHVL----AEPVE....VPASVRQATP..EFAQRLMELMGK-DPKDNK
DSQ  GCCTGGCTGCTGCGGCGCCTGCAGAGCACTGCTGTGAAGGGTGGGCAG...GTGATCGAGATT---------GTCGGCAGCCGT---GCCATCGGCCCGCGTGACCGCCTGCTGCTGGTGCAGGTGGGCAAGGAGCAGATCCTGATAGGCCATACCCCCGGCACCATCGAGGCCCTGCACGTACTG------------GCCGAACCCGTGGAA............GTGCCGGCAAGCGTCCGTCAGGCGACGCCG......GAGTTTGCCCAGCGGCTGATGGAGCTGATGGGCAAG---GACCCTAAGGACAACAAG
TRN  10010111100111011
NAM  FLIO_PSEAE/62-150
ASQ  AWLVRRVQQAGPRGNR.LIRT---LASQ-PLGPRDRLVLVQVGEEQILLGLTPGRITPLHVL----KEPVH....LPDGE-PATP..EFAQRLLELLNK-DPKGKP
DSQ  GCCTGGCTGGTGCGCCGGGTGCAACAGGCCGGTCCGCGCGGCAACCGC...TTGATCCGCACC---------CTTGCCAGCCAG---CCGCTGGGTCCGCGCGACCGGCTGGTGCTGGTGCAGGTCGGTGAGGAGCAGATCCTGCTCGGCCTGACGCCCGGCCGGATCACGCCGTTGCACGTGCTC------------AAGGAGCCGGTACAC............CTGCCGGACGGCGAG---CCGGCCACGCCG......GAATTCGCCCAGCGCCTGCTGGAGCTGCTGAACAAG---GACCCCAAGGGCAAGCCA
TRN  11011111101111111
NAM  FLIP_BUCAI/41-130
ASQ  SWILKKIS---SFKIN.KIISRMKIIERLSVGSQESIILVEVKQLRLLLGVTKKNISHLHTFPSNSKDEL-....IKETN-DTL-..-LQKNLFDRSLK--NFSKT
DSQ  AGTTGGATCTTAAAAAAGATTTCT---------TCTTTTAAAATTAAC...AAGATAATATCTCGTATGAAAATTATAGAAAGATTGTCTGTTGGATCTCAAGAATCTATTATTCTTGTAGAAGTTAAACAATTAAGATTATTATTAGGTGTGACAAAAAAAAATATTAGTCATTTGCATACGTTTCCGTCTAATTCAAAAGATGAACTA---............ATTAAAGAAACAAAT---GATACTTTG---......---TTGCAAAAAAATCTTTTTGATCGTTCTTTGAAA------AATTTTTCTAAAACA
TRN  10010101110011000
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