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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04316 - FlgM)
FAM  PF04316
PID  FlgM
DES  Anti-sigma-28 factor, FlgM
IPR  IPR007412
ANO  12
ALN  96
AID  0.241173
APH  (((((O66683_AQUAE/12-88:1.37121,(Q9WXU0_THEMA/13-92:1.11375,(Q97H01_CLOAB/10-89:0.92517,(FLGM_BACSU/1-86:0.61864,Q9K6V2_BACHD/1-85:0.73456):0.72138):0.11924):0.00000):0.39362,(Q9HYP5_PSEAE/13-105:0.55831,(Q9KQ03_VIBCH/14-102:0.34673,Q9X9K5_VIBPA/14-99:0.11416):0.82241):0.13136):0.58013,Q56717_VIBPA/11-90:1.29182):0.43077,FLGM_PROMI/10-94:0.24015):0.39885,FLGM_ECOLI/10-91:0.44927,FLGM_YEREN/10-93:0.11442);
ATP  (((((O66683_AQUAE/12-88,(Q9WXU0_THEMA/13-92,(Q97H01_CLOAB/10-89,(FLGM_BACSU/1-86,Q9K6V2_BACHD/1-85)))),(Q9HYP5_PSEAE/13-105,(Q9KQ03_VIBCH/14-102,Q9X9K5_VIBPA/14-99))),Q56717_VIBPA/11-90),FLGM_PROMI/10-94),FLGM_ECOLI/10-91,FLGM_YEREN/10-93);
ATL  11.5257
DNO  12
DLN  288
DID  0.389414
DPH  (Q9WXU0_THEMA/13-92:0.68164,(Q97H01_CLOAB/10-89:0.46971,O66683_AQUAE/12-88:0.60401):0.17556,(((Q56717_VIBPA/11-90:0.81159,(FLGM_PROMI/10-94:0.21898,(FLGM_ECOLI/10-91:0.34923,FLGM_YEREN/10-93:0.14174):0.25332):0.22309):0.18111,(Q9HYP5_PSEAE/13-105:0.50444,(Q9KQ03_VIBCH/14-102:0.20092,Q9X9K5_VIBPA/14-99:0.23665):0.33239):0.10010):0.30888,(FLGM_BACSU/1-86:0.37189,Q9K6V2_BACHD/1-85:0.42816):0.29491):0.11192);
DTP  (Q9WXU0_THEMA/13-92,(Q97H01_CLOAB/10-89,O66683_AQUAE/12-88),(((Q56717_VIBPA/11-90,(FLGM_PROMI/10-94,(FLGM_ECOLI/10-91,FLGM_YEREN/10-93))),(Q9HYP5_PSEAE/13-105,(Q9KQ03_VIBCH/14-102,Q9X9K5_VIBPA/14-99))),(FLGM_BACSU/1-86,Q9K6V2_BACHD/1-85)));
DTL  7.00024
RID  0.241173
RPH  (((((O66683_AQUAE/12-88:1.37121,(Q9WXU0_THEMA/13-92:1.11375,(Q97H01_CLOAB/10-89:0.92517,(FLGM_BACSU/1-86:0.61864,Q9K6V2_BACHD/1-85:0.73456):0.72138):0.11924):0.00000):0.39362,(Q9HYP5_PSEAE/13-105:0.55831,(Q9KQ03_VIBCH/14-102:0.34673,Q9X9K5_VIBPA/14-99:0.11416):0.82241):0.13136):0.58013,Q56717_VIBPA/11-90:1.29182):0.43077,FLGM_PROMI/10-94:0.24015):0.39885,FLGM_ECOLI/10-91:0.44927,FLGM_YEREN/10-93:0.11442);
RTP  (((((O66683_AQUAE/12-88,(Q9WXU0_THEMA/13-92,(Q97H01_CLOAB/10-89,(FLGM_BACSU/1-86,Q9K6V2_BACHD/1-85)))),(Q9HYP5_PSEAE/13-105,(Q9KQ03_VIBCH/14-102,Q9X9K5_VIBPA/14-99))),Q56717_VIBPA/11-90),FLGM_PROMI/10-94),FLGM_ECOLI/10-91,FLGM_YEREN/10-93);
RTL  11.5257
LNK  FLGM_BACSU/1-86:P39809:L14437
LNK  FLGM_ECOLI/10-91:P43532:U19773
LNK  FLGM_PROMI/10-94:P96974:U82214
LNK  FLGM_YEREN/10-93:Q57401:U16136
LNK  O66683_AQUAE/12-88:O66683:AE000685
LNK  Q56717_VIBPA/11-90:Q56717:U51896
LNK  Q97H01_CLOAB/10-89:Q97H01:AE007721
LNK  Q9HYP5_PSEAE/13-105:Q9HYP5:AE004757
LNK  Q9K6V2_BACHD/1-85:Q9K6V2:BA000004
LNK  Q9KQ03_VIBCH/14-102:Q9KQ03:AE004292
LNK  Q9WXU0_THEMA/13-92:Q9WXU0:AE001695
LNK  Q9X9K5_VIBPA/14-99:Q9X9K5:U12817
AMK  xxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9X9K5_VIBPA/14-99
ASQ  STTSRAPARN-DSS......ATSSATESKKAPAQQDAVSLSQQSKAVSKLQKDM-AASPAYDS--AKVAAIKEAIANGSYRVDPEKLADNMIKFEN
DSQ  TCGACGACCAGTCGCGCGCCTGCACGTAAC---GATTCAAGT..................GCGACATCAAGCGCAACTGAATCGAAAAAAGCGCCAGCTCAACAAGACGCTGTATCGCTAAGCCAACAAAGTAAAGCCGTCAGCAAACTCCAAAAGGATATG---GCAGCTTCTCCGGCTTACGACAGT------GCGAAAGTAGCGGCAATCAAAGAAGCAATCGCAAACGGTTCATACCGTGTTGATCCAGAAAAACTGGCCGACAATATGATCAAGTTTGAAAAC
TRN  11011101101011001
NAM  Q9KQ03_VIBCH/14-102
ASQ  NTTSRTNVRSSDASn....sSTQSGAVSRSSASGQDAVSLSSQSKAIGEMHSEM-ASRPSFDS--AKVAAIKEAIANGSYVVDPEKLADNMIKFEK
DSQ  AACACGACCAGCCGCACCAATGTGCGTTCTTCTGATGCCAGCaac............tctTCCACTCAATCCGGGGCGGTATCGCGCTCATCGGCAAGTGGTCAAGATGCGGTATCGCTGAGCTCACAAAGTAAAGCCATTGGCGAAATGCATAGTGAAATG---GCTTCAAGACCCAGTTTTGACAGC------GCAAAAGTCGCCGCAATCAAAGAAGCGATTGCTAACGGCTCTTACGTGGTTGACCCTGAAAAACTGGCCGATAATATGATCAAATTCGAAAAA
TRN  10010101100011001
NAM  Q9HYP5_PSEAE/13-105
ASQ  TPATTGRTGSTAAGrpdatgADKAGQAATSAPKSGESVQISETAQNMQKVTDQL-QTLPVVDN--DKVARIKQAIADGTYQVDSERVASKLLDFES
DSQ  ACGCCAGCCACCACCGGCCGTACCGGCAGCACCGCCGCAGGTcgccccgacgccactggcGCCGACAAGGCAGGCCAGGCTGCGACTTCCGCTCCGAAGAGCGGCGAGTCGGTGCAGATCAGCGAAACCGCCCAGAACATGCAGAAAGTCACGGACCAGCTG---CAGACCCTGCCGGTGGTCGACAAC------GATAAGGTTGCCCGGATCAAGCAAGCGATCGCCGATGGCACCTATCAGGTCGACAGCGAGCGTGTTGCCAGCAAGCTGCTCGACTTCGAATCC
TRN  11011101101011011
NAM  O66683_AQUAE/12-88
ASQ  GLLLETEKRK----......--NTEQKESGTNKIEDKVTLSKIAQELSKNDVEE-----KDLE--KKVKELKEKIEKGEYEVSDEKVVKGLIEFFT
DSQ  GGACTCTTACTGGAAACGGAAAAGAGGAAG------------..................------AACACGGAACAGAAGGAAAGCGGTACTAACAAAATAGAGGACAAGGTTACACTCTCCAAGATAGCTCAGGAACTTTCAAAGAACGACGTTGAAGAA---------------AAAGACCTTGAG------AAAAAAGTAAAGGAGTTAAAAGAAAAAATAGAAAAAGGAGAGTACGAAGTAAGCGACGAGAAAGTGGTGAAAGGACTGATAGAGTTTTTTACG
TRN  10010101100011000
NAM  FLGM_YEREN/10-93
ASQ  LPVTPVQPRE----......TSDIAQQTRKP-SAQSKTPVSGTEVKLSDAQAKL-MQPGSQDINVERVETLKQAIRSGQLTMDTGKIADALLKNVA
DSQ  TTACCGGTAACACCAGTGCAGCCACGGGAA------------..................ACCAGTGATATTGCGCAACAAACGCGTAAACCT---TCTGCTCAATCAAAAACACCGGTAAGTGGTACTGAGGTTAAATTGAGCGACGCGCAGGCAAAATTG---ATGCAACCGGGCAGCCAGGACATCAATGTAGAACGTGTCGAAACCTTAAAACAGGCGATCCGTTCAGGCCAACTGACCATGGACACCGGTAAAATTGCCGATGCCTTGCTCAAAAATGTTGCC
TRN  11011101101011000
NAM  FLGM_ECOLI/10-91
ASQ  KPVSTVQPRE----......TTDAPVTNSR---AAKTTASTSTSVTLSDAQAKL-MQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQ
DSQ  AAGCCTGTAAGCACCGTTCAACCGCGCGAA------------..................ACCACTGACGCGCCGGTAACGAACAGCCGG---------GCGGCAAAAACAACCGCCTCCACCAGCACCAGTGTGACGTTAAGCGACGCGCAAGCAAAACTG---ATGCAACCCGGCAGCAGTGATATCAATCTTGAACGTGTCGAAGCGTTAAAACTGGCGATTCGTAACGGTGAACTAAAAATGGACACCGGCAAAATTGCCGATGCGCTGATCAACGAAGCGCAG
TRN  11011101101011010
NAM  FLGM_PROMI/10-94
ASQ  IPITAISQRN----......LNEGAQEARKTGNAQTKAMAGDTSVKLSEAQKKL-VQPSNQDINVEKVARLKAAIADGTLTMDSSKIAEALFREAA
DSQ  ATCCCAATCACGGCCATTTCTCAGCGTAAC------------..................CTTAATGAAGGTGCCCAAGAAGCACGAAAAACCGGTAATGCGCAAACAAAAGCAATGGCGGGTGATACTTCTGTGAAACTAAGTGAAGCACAGAAAAAATTA---GTTCAACCTAGCAATCAAGACATCAATGTCGAGAAAGTTGCCCGTTTAAAAGCAGCGATTGCCGATGGAACATTAACAATGGACAGCAGCAAAATTGCGGAAGCACTTTTCCGAGAAGCTGCT
TRN  11011101111011010
NAM  Q9WXU0_THEMA/13-92
ASQ  NPIEGIKKPS----......--VEKSKEKRKKESTDNVELRHVEDVRKFAEEAK----NISTVREQLVEELKKAIESGNYFIDTERLARKILEELS
DSQ  AATCCCATCGAAGGAATAAAGAAGCCTTCT------------..................------GTAGAAAAATCAAAGGAGAAGAGGAAAAAGGAAAGCACCGATAATGTGGAACTTCGACACGTTGAAGATGTCAGAAAATTCGCTGAAGAGGCGAAA------------AACATCTCAACTGTCCGCGAACAGCTGGTAGAGGAGCTGAAAAAAGCCATAGAAAGTGGGAATTACTTCATCGATACCGAAAGACTTGCCCGAAAAATTCTGGAGGAGCTGTCC
TRN  10010101100011001
NAM  Q97H01_CLOAB/10-89
ASQ  NKIELYKFNS----......--SVNDRKNSAPKDKDVIEISDTGRYLSTFSENE----SIKKAGTKRVEEIKKEITEGNYKVDANSLAKKILDYIK
DSQ  AACAAGATTGAGCTATATAAATTCAATAGC------------..................------AGCGTCAATGACAGAAAAAATAGTGCTCCTAAAGATAAAGACGTTATTGAAATATCTGATACAGGCAGATACCTCAGTACTTTTTCCGAAAATGAA------------TCTATAAAAAAAGCTGGTACAAAAAGGGTAGAAGAGATAAAAAAAGAAATTACAGAAGGAAACTATAAGGTAGATGCCAATTCACTTGCAAAAAAAATATTAGATTATATTAAA
TRN  10010101110011000
NAM  Q9K6V2_BACHD/1-85
ASQ  MKVNPYTAIS----......QQLYRQQVEKAETVKGKPQKRDQLEISKEAQEMQ-KGSPIEVEREKKIEEIKQKIEKGEYSVDSRAVADKLYDFWN
DSQ  ATGAAAGTTAATCCGTATACAGCGATCTCC------------..................CAACAGCTTTATCGTCAACAAGTAGAAAAAGCCGAGACCGTTAAGGGAAAACCACAGAAACGAGATCAACTCGAAATTTCAAAAGAGGCGCAGGAAATGCAA---AAAGGCTCTCCAATTGAAGTAGAACGAGAGAAGAAAATAGAAGAAATCAAACAGAAGATTGAAAAAGGCGAGTACAGCGTGGACTCACGGGCTGTTGCCGACAAGCTTTATGACTTCTGGAAC
TRN  10010101110011001
NAM  FLGM_BACSU/1-86
ASQ  MKINQFGTQS----......VNPYQKNYDKQAVQKTVAQPQDKIEISSQAKEMQHASDAVTGSRQEKIAQLKAQIENGSYKVDANHIAKNMINFYK
DSQ  ATGAAAATCAATCAATTTGGAACACAATCC------------..................GTTAATCCATATCAAAAAAATTATGATAAGCAAGCGGTGCAAAAAACTGTTGCACAACCTCAAGATAAAATTGAAATTTCATCACAGGCTAAAGAAATGCAACATGCATCCGACGCAGTCACTGGTTCACGACAGGAAAAAATTGCGCAGCTTAAAGCGCAAATTGAAAACGGGTCATACAAAGTAGACGCAAATCATATTGCGAAAAATATGATTAATTTTTATAAA
TRN  11011101111011001
NAM  Q56717_VIBPA/11-90
ASQ  VPQTNFQQAS----......-KKPVETMEQTKVSEPAFQANTAAIDRAQAEMKS-----LPDVDMEKVEQVRNALARGELSLDTKALSKAIMQFHT
DSQ  GTCCCACAAACAAATTTCCAACAAGCAAGT------------..................---AAAAAGCCTGTTGAAACAATGGAACAAACCAAAGTAAGCGAGCCTGCGTTTCAAGCAAACACAGCAGCAATTGATCGTGCCCAAGCAGAAATGAAATCG---------------CTACCAGACGTCGATATGGAAAAAGTTGAGCAAGTTCGTAACGCGCTAGCACGCGGCGAATTGAGCCTAGATACAAAAGCGCTATCTAAGGCAATTATGCAATTCCATACT
TRN  11011101111011011
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