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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04179 - Init_tRNA_PT)
FAM  PF04179
PID  Init_tRNA_PT
DES  Initiator tRNA phosphoribosyl transferase
IPR  IPR007306
ANO  4
ALN  544
AID  0.335453
APH  (YAW6_SCHPO/1-445:0.60250,RIT1_YEAST/9-513:0.76313,(O22878_ARATH/1-497:1.10080,Q9C2N4_NEUCR/1-435:0.59241):0.18744);
ATP  (YAW6_SCHPO/1-445,RIT1_YEAST/9-513,(O22878_ARATH/1-497,Q9C2N4_NEUCR/1-435));
ATL  3.24628
DNO  4
DLN  1632
DID  0.406601
DPH  ((Q9C2N4_NEUCR/1-435:0.60501,YAW6_SCHPO/1-445:0.48699):0.07937,RIT1_YEAST/9-513:0.57992,O22878_ARATH/1-497:0.71021);
DTP  ((Q9C2N4_NEUCR/1-435,YAW6_SCHPO/1-445),RIT1_YEAST/9-513,O22878_ARATH/1-497);
DTL  2.4615
RID  0.335453
RPH  (YAW6_SCHPO/1-445:0.60250,RIT1_YEAST/9-513:0.76313,(O22878_ARATH/1-497:1.10080,Q9C2N4_NEUCR/1-435:0.59241):0.18744);
RTP  (YAW6_SCHPO/1-445,RIT1_YEAST/9-513,(O22878_ARATH/1-497,Q9C2N4_NEUCR/1-435));
RTL  3.24628
LNK  O22878_ARATH/1-497:O22878:AC002336
LNK  Q9C2N4_NEUCR/1-435:Q9C2N4:AL513467
LNK  RIT1_YEAST/9-513:P23796:Z49704
LNK  YAW6_SCHPO/1-445:Q10181:Z69369
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  YAW6_SCHPO/1-445
ASQ  MDEFDPLDAV---QQIH-----VQARHPK------NRLLSIAHDAKFVDSVI-ASYPTFKPVVNERCGTWYVNRRHAPISVYFKSTDGHTGQWSFSCRRLNLHLLNEITTCDGLIIVDSTRRGKRMPDALSKTIPIWIATLNKCVF-ERLRPHS----------------------FPNARLAFLPP-FLPDTEKSSILQRLDGFVDSLMQSG-IDLDALAAKLT-KPIRPLWVTPASRLT-------SAQFEEY----FT--------VVLVTASAQVQNGYSREHGFLYVQGAADDEEEWSHGLTPEVFWQNTESI-----LTCPEEQLEQ-KISLLLSSTRNSP-TMSNSSLTHLLPTP------IFVGDVTGFYPPPENTS-------YFVLNLS-NTTLN---VKNEL--------CFPIPSGK-KGAPVF-RKHFPSILQELNSLDPPFYERDA---IFIVDEGNAKEAASCLALMILCLYYDLHMHLLAHPISLSASQSHLTKQTVRQFLVKITELHS--KTNPSRAFLLAVNSLLL
DSQ  ATGGACGAATTCGACCCTTTAGACGCTGTG---------CAACAAATTCAT---------------GTTCAAGCAAGACACCCAAAG------------------AATCGGTTGCTGTCAATTGCACACGATGCCAAGTTTGTCGACTCAGTTATA---GCTTCGTACCCCACATTTAAACCTGTTGTAAATGAACGATGCGGTACGTGGTATGTCAACCGACGACATGCTCCGATTTCTGTTTATTTCAAAAGTACTGATGGTCATACCGGGCAATGGTCTTTTAGCTGTCGTCGTCTCAATTTGCATTTGCTAAATGAGATAACCACTTGTGATGGATTGATTATAGTAGATTCTACTCGTCGTGGAAAGAGAATGCCCGATGCTCTATCAAAGACGATTCCGATATGGATTGCTACGCTCAATAAATGTGTTTTC---GAACGGCTTCGTCCCCATTCC------------------------------------------------------------------TTTCCTAATGCTCGTTTGGCCTTTTTACCCCCG---TTTTTACCTGATACAGAAAAATCATCTATTTTACAGAGGCTAGATGGATTTGTAGATTCTTTAATGCAGTCCGGC---ATTGACTTAGATGCGTTGGCGGCTAAGCTAACT---AAACCCATTCGTCCTTTATGGGTAACACCTGCTAGTCGTTTAACA---------------------TCTGCACAATTTGAAGAATAT------------TTTACA------------------------GTTGTTCTGGTTACTGCAAGTGCTCAAGTACAGAATGGGTACTCCCGAGAACATGGATTTCTTTACGTTCAAGGAGCAGCAGATGACGAAGAAGAATGGTCGCATGGGCTGACCCCTGAAGTCTTTTGGCAAAATACTGAATCTATC---------------CTCACATGCCCAGAGGAGCAATTGGAGCAA---AAAATTAGCCTCCTACTATCTTCAACTAGAAACTCACCT---ACCATGTCAAATTCTTCGTTAACCCATCTTTTACCAACTCCT------------------ATATTTGTTGGGGATGTTACGGGATTTTATCCCCCTCCAGAAAATACATCT---------------------TACTTTGTTTTGAATTTGTCG---AATACCACCCTGAAT---------GTGAAGAATGAACTT------------------------TGTTTTCCAATACCGTCAGGAAAA---AAAGGTGCTCCGGTGTTT---CGCAAGCATTTCCCTTCAATATTGCAAGAATTAAATTCACTTGATCCTCCATTTTATGAGAGAGATGCT---------ATATTTATTGTCGATGAAGGAAATGCTAAAGAAGCCGCCTCTTGTCTTGCATTGATGATTCTTTGTTTATACTACGACCTCCATATGCATTTACTTGCCCATCCTATATCTCTATCTGCATCTCAGTCTCACCTTACCAAGCAAACGGTTCGCCAATTTCTGGTAAAAATTACAGAACTACACTCC------AAAACAAATCCCTCACGAGCATTCCTTCTTGCCGTCAATTCCCTTTTACTT
TRN  10010101100011000
NAM  Q9C2N4_NEUCR/1-435
ASQ  MPAPTLADIVFSEQANH-NFSKILGDLKKSNLSITNRLKSIQHDAAFVHEVADVL--GLPLVANERCGSWYIDPQLKRSSAYFKSTDGHTGQWKFSTRRLNFHLLEVIGRNDGCIIVDSTRRGKRMPDALSKTIPIWCTVLNQALFPSHPESHT----------------------------LHVPPTVVSSSEHSQMSSRLPFFLSSLLALQ-PDIPSLRQNIQ-KPLRPLWVTPDDELT-------PEMVDEIKVS-FHP-------VVCCTSSRRVVGTEMSEEG--YIQGAGDDTENWAHGLTAPLFWANQRQL-----LETPEGDLPGLIEMLVANSEAGGQ---AVGELKRVAPRL-------LVGALSAEEKALTSSSQ----ENICVVSLVPKTTEKETWEKSKR--------HMEVGLGKSKTASRFLREALPSI-CD-------FVSRFLQ---ECADADAETGTSTGK-------DANKEIVLLCE------SGRDLS---VGVALALYCWCFV-----DSAGTVRSAADQGQ
DSQ  ATGCCGGCTCCCACCCTAGCAGACATTGTCTTCTCGGAGCAAGCCAACCAC---AACTTCTCCAAGATCCTGGGAGATCTCAAGAAGTCGAACCTCTCCATCACGAATCGGCTCAAGTCCATACAGCACGATGCGGCCTTCGTTCACGAGGTAGCTGATGTTCTC------GGCCTTCCGCTCGTCGCTAATGAGCGATGCGGCAGCTGGTATATTGATCCCCAACTGAAGAGGTCGTCGGCTTACTTTAAGAGCACCGATGGGCACACGGGCCAGTGGAAGTTTAGCACGAGGAGGCTAAACTTTCATCTTTTGGAGGTCATTGGGCGGAACGATGGATGCATCATCGTAGACTCAACCCGGCGAGGCAAGCGCATGCCCGACGCCCTCAGCAAAACAATCCCAATCTGGTGCACCGTCCTTAACCAGGCCCTCTTCCCCTCCCACCCCGAATCCCACACC------------------------------------------------------------------------------------CTCCACGTCCCCCCAACCGTAGTCTCCTCCTCCGAGCACTCTCAAATGTCCTCCCGCCTTCCCTTCTTCCTCAGCTCCCTCCTCGCTCTCCAG---CCCGATATTCCCTCCCTCCGCCAAAACATACAA---AAACCCCTCCGCCCCCTTTGGGTGACCCCAGACGACGAACTAACT---------------------CCCGAGATGGTCGATGAAATCAAAGTCTCC---TTCCACCCC---------------------GTCGTCTGCTGCACCAGCTCCCGCCGGGTGGTAGGTACGGAGATGAGTGAAGAGGGG------TATATCCAGGGCGCGGGCGATGACACGGAGAACTGGGCGCATGGACTGACGGCGCCGCTGTTTTGGGCGAACCAGAGGCAACTG---------------TTGGAGACGCCGGAGGGGGATTTACCGGGCTTGATAGAGATGCTGGTTGCGAATTCGGAGGCGGGCGGACAA---------GCGGTGGGGGAACTGAAGAGGGTTGCCCCGAGGCTG---------------------TTGGTGGGTGCGTTATCGGCTGAGGAGAAGGCGCTGACTTCTTCTTCCCAA------------GAAAACATTTGCGTGGTTAGTCTTGTGCCGAAGACAACGGAAAAGGAGACGTGGGAGAAGTCGAAGAGG------------------------CATATGGAGGTTGGGCTGGGCAAAAGCAAGACTGCGAGCCGGTTCTTGAGAGAGGCACTGCCGAGTATT---TGCGAC---------------------TTTGTCTCGCGGTTCCTGCAA---------GAATGCGCTGATGCCGATGCCGAGACGGGCACAAGCACTGGCAAA---------------------GACGCAAACAAAGAGATTGTCTTGCTGTGCGAG------------------TCTGGTAGGGACTTGTCG---------GTTGGAGTAGCACTGGCTCTTTACTGCTGGTGCTTCGTC---------------GACTCGGCTGGGACTGTAAGGTCTGCAGCGGACCAGGGACAG
TRN  10010101100011000
NAM  RIT1_YEAST/9-513
ASQ  YRSRVQFSISVMDENIYLSLSQINKDIRKENKSVRNRLQSILLDNKFLQDRVIPIFPHYPLIPNERCGLWYCNPSSFKQTSYFKSTDGHVNQWDFSTRRLNFHLLETIRDNKGIIIVDSTRRGKKIPDALSKTVPIWCAVLNTLML-QETEKN-----------------------VAIDKVLYLPPETVPKSEYDMIKRKIPELVAKLQKLNIIDSKKLNELFMGKLLRPIWVHPGSSLLDHSVDYFTGEVQEYEAW-ETPEDQNIIPIILCTVSYQAQDGMDKRYGFTYVQGAADDHELWSFGLDSNMFWAHIEYLGD---ASYSDDQLHDYIMDLAAAKLRNQCYIQDKGSLDEVFGNIDKITNEISLGKVSSGLTINKNLKQKLKSEYGKVIIFSNSVTVAEDTDDEEESGTDPFISIYKLQSGD-KKSSKALRSTFPRI-HG--EIQSLFTNRDEKIKPMLICCNTGTDMSIGVILSILCTKYTEEWMLTSE-------LPDISKLIVRKHLTKLISHLKGRNVNPSRATLNSVNSFLM
DSQ  TATAGATCCAGAGTACAGTTTAGTATATCCGTGATGGATGAAAATATTTATCTTTCGCTATCTCAGATAAATAAAGACATCAGAAAGGAAAACAAGTCCGTAAGGAATCGACTTCAGAGTATTCTTTTAGACAATAAATTTTTGCAAGATCGAGTTATCCCTATATTTCCCCATTATCCACTGATACCCAATGAAAGATGTGGGCTATGGTACTGTAATCCATCAAGTTTCAAACAGACCAGTTACTTTAAGAGCACAGACGGGCATGTCAACCAATGGGACTTTAGCACCCGAAGATTGAACTTTCATTTGTTAGAGACCATTCGAGATAATAAAGGTATTATAATTGTCGATAGTACTAGAAGAGGTAAAAAAATCCCAGATGCTTTGAGTAAGACTGTCCCCATATGGTGTGCTGTATTAAATACGTTAATGCTT---CAGGAAACAGAAAAAAAT---------------------------------------------------------------------GTTGCCATCGATAAGGTACTGTATCTTCCACCTGAGACAGTTCCCAAATCAGAATATGACATGATTAAGCGAAAAATACCCGAACTAGTTGCTAAACTACAAAAATTGAATATTATAGATTCTAAGAAATTGAACGAACTGTTTATGGGTAAGTTATTGCGGCCCATATGGGTTCACCCTGGTTCTTCACTTCTAGACCATTCTGTTGATTACTTCACGGGTGAAGTACAGGAGTATGAAGCCTGG---GAAACACCTGAAGACCAAAACATAATACCCATTATTTTGTGCACGGTAAGCTATCAAGCACAAGATGGTATGGATAAAAGATACGGCTTCACTTATGTGCAGGGTGCAGCCGACGATCACGAGCTCTGGTCTTTTGGTTTGGATTCAAATATGTTTTGGGCCCATATAGAATACCTAGGCGAC---------GCAAGTTATTCAGACGACCAGTTACATGATTACATCATGGATTTGGCTGCTGCAAAGCTGAGAAATCAGTGTTATATACAAGATAAAGGAAGCTTGGATGAAGTCTTTGGAAACATTGATAAAATTACGAATGAGATATCTCTAGGAAAAGTGAGTTCAGGCTTAACCATCAATAAGAATTTGAAACAGAAATTGAAGTCAGAATATGGTAAAGTTATAATTTTCAGTAATTCGGTGACTGTTGCTGAAGATACAGACGATGAAGAAGAAAGTGGGACAGATCCGTTTATTTCAATATACAAGTTGCAAAGCGGAGAC---AAGAAAAGTTCAAAAGCTTTACGATCCACATTCCCTAGAATC---CATGGA------GAAATTCAATCGTTGTTTACAAATCGAGATGAAAAAATAAAGCCAATGCTAATATGCTGCAATACAGGTACTGATATGTCAATCGGTGTCATCTTAAGTATCCTTTGTACCAAATATACTGAAGAATGGATGCTTACGTCGGAG---------------------TTACCGGACATCAGTAAGCTTATTGTAAGAAAACACTTGACAAAATTGATTTCCCACTTGAAAGGACGCAACGTTAACCCTTCAAGAGCAACACTGAACAGCGTCAATAGCTTTTTAATG
TRN  10010101100011000
NAM  O22878_ARATH/1-497
ASQ  MGAKSEEPMMTTRDSIYR----AARNIKRRDNSLYNALRSIYQDSIFVHEIS-LLWPKLPLVANLRCGLWYS--EKFDATCYFKSTDGHTNNLSFNTSRLNLHLPLLAGEKGGCIIIDSTRKGKRFPDSMSKTIPMWSCVVNRSIF-NHWNRLCNIDAVSYNGLTSDDDGDNIRKLLDKWDCSLHLPLWVSNTERASIEARLDEWTRELDESG-ADIASLASCLR-KPLRPLWVSQKTVIW-------LNEVPEHDSWDFTP-----LILVSASASGELQNRTSSEFSWNYIPGAGDDEESWARGLSPNVFWTHVDDLIHSGPDLCNQKVAEIVENDRVYRAHRGQEAPQVVVKCSKSNGGVN----HAKSDEILCLSAQIPKVDE----ERLVFWLSSTNLAVGASQVACKETS---IDCILNCDQNPISVPVSYLEEHLHLP-MKGSKFDRFSISRNLP----PAVNFAKLKMSSGKKVLVCCQDGAFDGGKSFE-------EKSITKMDMRRMLIFICKYAV--NARPSRGNLKQVFGFLS
DSQ  ATGGGTGCAAAATCAGAAGAGCCGATGATGACAACAAGAGATAGTATATACAGA------------GCTGCAAGGAATATAAAACGACGAGACAACAGTCTCTACAACGCTCTTCGATCTATCTACCAAGACTCCATCTTCGTCCACGAGATCTCT---CTGCTTTGGCCTAAACTTCCTCTCGTTGCAAACCTTCGTTGTGGTCTCTGGTACTCT------GAAAAGTTCGACGCCACTTGCTACTTCAAATCCACCGATGGTCATACCAATAATTTGTCCTTTAACACTTCTCGTCTCAATCTCCATCTTCCTCTTCTCGCTGGAGAAAAAGGAGGATGCATCATTATTGATTCTACTCGTAAAGGAAAGCGTTTTCCGGATAGCATGTCGAAAACGATACCTATGTGGTCTTGTGTAGTGAACCGTTCAATATTT---AATCATTGGAACAGATTATGTAACATTGATGCAGTGAGTTACAATGGTTTGACTAGTGATGATGATGGTGATAACATCAGGAAATTGTTAGATAAATGGGATTGTTCGTTACATCTACCACTATGGGTTTCAAATACTGAGAGGGCTTCTATTGAAGCTAGATTGGATGAGTGGACAAGAGAGTTAGATGAGAGTGGA---GCTGATATAGCTTCTCTAGCTTCATGTTTGAGA---AAACCTTTGCGTCCTCTTTGGGTTTCACAGAAAACTGTTATATGG---------------------TTGAATGAAGTACCTGAGCATGATTCATGGGATTTCACACCT---------------CTTATCCTTGTCTCAGCTTCTGCTTCTGGTGAACTTCAAAACAGAACTAGTTCAGAGTTTAGTTGGAATTATATTCCAGGGGCTGGTGATGATGAAGAGAGTTGGGCTAGAGGTTTATCCCCAAATGTTTTTTGGACACATGTTGATGATTTGATTCACTCAGGGCCTGACTTGTGTAACCAGAAAGTTGCAGAGATTGTTGAAAACGATAGAGTGTATCGAGCGCATAGAGGTCAAGAAGCTCCTCAGGTTGTTGTCAAATGCTCAAAATCTAATGGTGGAGTCAAT------------CACGCTAAGAGTGATGAAATCTTATGTCTTAGTGCACAAATACCGAAAGTTGATGAA------------GAAAGATTAGTATTTTGGTTGTCATCAACGAATCTTGCTGTTGGTGCATCACAAGTAGCTTGTAAGGAGACATCA---------ATTGACTGCATATTAAATTGTGATCAAAATCCTATCTCAGTCCCTGTATCATATCTTGAAGAGCATTTGCATCTACCC---ATGAAGGGTTCAAAATTTGATAGATTTTCTATATCAAGAAATCTTCCT------------CCCGCGGTTAATTTTGCTAAGCTCAAGATGAGTTCAGGGAAGAAAGTCTTGGTTTGTTGTCAAGATGGGGCCTTTGATGGTGGAAAATCCTTTGAA---------------------GAGAAGAGTATAACAAAAATGGATATGCGACGGATGCTAATATTTATATGCAAATACGCGGTG------AATGCTCGACCATCTAGAGGCAATCTAAAGCAAGTTTTTGGTTTTCTCTCG
TRN  10010101100011000
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