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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04075 - DUF385)
FAM  PF04075
PID  DUF385
DES  Domain of unknown function (DUF385)
IPR  IPR004378
ANO  10
ALN  150
AID  0.307918
APH  (Y1292_MYCBO/12-148:0.37470,((P71854_MYCTU/18-151:0.49819,((((P95144_MYCTU/6-129:0.22212,Q9KZZ9_STRCO/8-133:0.41499):0.70833,Q9K447_STRCO/18-139:0.85348):0.16343,O06389_MYCTU/4-129:0.99431):0.45562,(O85698_STRLI/13-145:0.17181,Y1584_MYCBO/13-143:0.20736):0.30382):0.17304):0.10576,Q9ZH81_MYCPA/16-143:0.49647):0.19677,Q9WX21_STRCO/11-134:0.68449);
ATP  (Y1292_MYCBO/12-148,((P71854_MYCTU/18-151,((((P95144_MYCTU/6-129,Q9KZZ9_STRCO/8-133),Q9K447_STRCO/18-139),O06389_MYCTU/4-129),(O85698_STRLI/13-145,Y1584_MYCBO/13-143))),Q9ZH81_MYCPA/16-143),Q9WX21_STRCO/11-134);
ATL  7.02469
DNO  10
DLN  450
DID  0.455887
DPH  ((((((Q9ZH81_MYCPA/16-143:0.34428,Y1292_MYCBO/12-148:0.35750):0.05216,(Q9WX21_STRCO/11-134:0.43086,P71854_MYCTU/18-151:0.32996):0.06177):0.12303,(Y1584_MYCBO/13-143:0.19543,O85698_STRLI/13-145:0.19689):0.18705):0.17449,Q9K447_STRCO/18-139:0.64624):0.13914,O06389_MYCTU/4-129:0.55523):0.34318,Q9KZZ9_STRCO/8-133:0.38204,P95144_MYCTU/6-129:0.11540);
DTP  ((((((Q9ZH81_MYCPA/16-143,Y1292_MYCBO/12-148),(Q9WX21_STRCO/11-134,P71854_MYCTU/18-151)),(Y1584_MYCBO/13-143,O85698_STRLI/13-145)),Q9K447_STRCO/18-139),O06389_MYCTU/4-129),Q9KZZ9_STRCO/8-133,P95144_MYCTU/6-129);
DTL  4.63465
RID  0.307918
RPH  (Y1292_MYCBO/12-148:0.37470,((P71854_MYCTU/18-151:0.49819,((((P95144_MYCTU/6-129:0.22212,Q9KZZ9_STRCO/8-133:0.41499):0.70833,Q9K447_STRCO/18-139:0.85348):0.16343,O06389_MYCTU/4-129:0.99431):0.45562,(O85698_STRLI/13-145:0.17181,Y1584_MYCBO/13-143:0.20736):0.30382):0.17304):0.10576,Q9ZH81_MYCPA/16-143:0.49647):0.19677,Q9WX21_STRCO/11-134:0.68449);
RTP  (Y1292_MYCBO/12-148,((P71854_MYCTU/18-151,((((P95144_MYCTU/6-129,Q9KZZ9_STRCO/8-133),Q9K447_STRCO/18-139),O06389_MYCTU/4-129),(O85698_STRLI/13-145,Y1584_MYCBO/13-143))),Q9ZH81_MYCPA/16-143),Q9WX21_STRCO/11-134);
RTL  7.02469
LNK  O06389_MYCTU/4-129:O06389:BX842573
LNK  O85698_STRLI/13-145:O85698:AF072709
LNK  P71854_MYCTU/18-151:P71854:BX842583
LNK  P95144_MYCTU/6-129:P95144:BX842578
LNK  Q9K447_STRCO/18-139:Q9K447:AL939130
LNK  Q9KZZ9_STRCO/8-133:Q9KZZ9:AL939120
LNK  Q9WX21_STRCO/11-134:Q9WX21:AL939116
LNK  Q9ZH81_MYCPA/16-143:Q9ZH81:AF069754
LNK  Y1292_MYCBO/12-148:P64788:BX248338
LNK  Y1584_MYCBO/13-143:P64876:BX248339
AMK  xxxxxxxxxxxxxxxxxxxxxxxxx..xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9WX21_STRCO/11-134
ASQ  D-EF--------RANEG-KVGGPFE..G-GD.LLLLTTTGARSGASRTTPL--GYVRHGES--LLVVGSNLGGPRHPGWYYNLLAHPLVRVEVGAAGFEALA-VPAE--GERREELFAHVVREAPG-YGDYQAGTSRP.LP---VVVLEQ
DSQ  GAC---GAGTTC------------------------CGCGCCAACGAGGGG---AAGGTCGGCGGCCCCTTCGAA......GGC---GGGGAT...CTGCTTCTGCTGACCACCACCGGCGCCCGGTCGGGGGCCTCGCGGACCACACCGCTC------GGTTACGTCCGCCACGGGGAGTCC------CTGCTCGTGGTCGGGTCCAACCTCGGTGGCCCGCGGCACCCCGGTTGGTACTACAACCTGCTCGCCCATCCCCTGGTCCGGGTGGAGGTGGGCGCGGCGGGTTTCGAGGCGCTCGCG---GTGCCCGCCGAG------GGGGAGCGGCGCGAGGAGCTGTTCGCGCACGTCGTACGGGAGGCGCCCGGG---TACGGCGACTACCAGGCCGGCACCAGCAGGCCG...CTGCCG---------GTCGTGGTGCTGGAGCAG
TRN  10010101100011011
NAM  Q9ZH81_MYCPA/16-143
ASQ  D-----DHVRAYRETGG-ETGYLWN..G-VP.ILLLTVTGRRTGRALTSAL--IFGRDGDD--YLVVASMGGAPRHPSWYLNLQANPAAGIQVQADELAVVA-RTAS--AAEKPRFWKIMTDVWPN-YDVYQSRTDRD.IP---VVVLTP
DSQ  GAC---------------GACCACGTGCGCGCATACCGCGAAACCGGCGGC---GAGACCGGCTATCTGTGGAAC......GGC---GTTCCG...ATCTTGCTGCTCACGGTGACCGGGCGTCGCACCGGCCGCGCACTCACGTCGGCGCTG------ATCTTCGGCCGCGACGGCGACGAC------TATCTGGTGGTGGCCTCCATGGGCGGCGCGCCGCGGCACCCGTCGTGGTATCTGAATCTGCAAGCCAATCCGGCGGCCGGAATTCAGGTGCAAGCCGACGAGTTGGCGGTCGTGGCG---CGCACCGCGTCG------GCCGCCGAGAAGCCGCGGTTTTGGAAGATCATGACTGACGTGTGGCCCAAC---TACGACGTCTACCAGTCACGAACCGACCGCGAC...ATTCCC---------GTCGTTGTACTCACACCG
TRN  11011111101111101
NAM  Y1292_MYCBO/12-148
ASQ  GVQLLRLHDAIYRGTNG-RIGHRIP..G-APpSLLLHTTGAKTSQPRTTSL--TYARDGDA--YLIVASKGGDPRSPGWYHNLKANPDVEINVGPKRFGVTA-KPVQPHDPDYARLWQIVNENNANRYTNYQSRTSRP.IP---VVVLTR
DSQ  GGCGTGCAGCTGCTCAGGCTGCACGACGCGATCTACCGAGGCACTAACGGT---CGGATCGGACACCGAATCCCC......GGC---GCGCCAccgAGTTTGCTGCTGCATACCACCGGCGCCAAGACGAGCCAGCCGCGAACCACGTCACTC------ACCTATGCTCGCGACGGCGACGCG------TACCTGATCGTGGCGTCCAAAGGTGGCGATCCCCGCTCGCCGGGTTGGTACCACAACCTCAAGGCCAACCCGGACGTCGAAATCAACGTCGGGCCCAAGCGATTCGGTGTGACAGCG---AAACCGGTGCAGCCCCACGACCCGGACTACGCGCGGCTCTGGCAGATCGTCAACGAGAACAACGCCAACCGATACACCAACTACCAGAGCCGGACGTCACGGCCA...ATCCCG---------GTCGTCGTATTGACCCGC
TRN  10010101100011001
NAM  P71854_MYCTU/18-151
ASQ  IKWMSRINTWMYRRNDGEGLGGTFQ..K-IP.VALLTTTGRKTGQPRVNPL--YFLRDGGR--VIVAASKGGAEKNPMWYLNLKANPKVQVQIKKEVLDLTA-RDAT--DEERAEYWPQLVTMYPS-YQDYQSWTDRT.IP---IVVCEP
DSQ  ATCAAGTGGATGTCACGGATTAATACCTGGATGTACCGCCGCAACGACGGGGAGGGTCTGGGCGGCACCTTCCAG......AAG---ATTCCG...GTCGCGCTGCTGACCACCACCGGCCGCAAGACCGGCCAGCCGCGGGTCAACCCGCTC------TACTTCCTGCGCGACGGTGGGCGG------GTCATTGTCGCGGCCTCCAAGGGCGGCGCGGAGAAGAACCCGATGTGGTACCTCAACCTCAAGGCCAACCCCAAGGTTCAGGTACAGATCAAAAAGGAAGTGCTGGACCTTACCGCG---CGGGACGCGACC------GACGAGGAGCGCGCCGAATATTGGCCACAGTTGGTCACGATGTACCCAAGT---TATCAGGACTACCAGTCCTGGACCGACCGCACG...ATCCCG---------ATCGTGGTTTGCGAACCC
TRN  11011101101011001
NAM  O85698_STRLI/13-145
ASQ  Q-WV-REQVERYESSGG-TEGTTLMdtG-LP.VIVLTTRGARSGKLRKTPL--MRVEHEGR--YAVVASLGGAPKHPVWYFNVKADPRVELQDGPVKQDMTA-REVT--GAEKARWWERAVAAYPS-YADYQKKTERE.IP---VFVLEP
DSQ  CAG---TGGGTG---CGCGAGCAGGTCGAGCGGTACGAGAGTTCGGGCGGC---ACCGAGGGCACGACGCTGATGgacaccGGT---CTGCCC...GTGATCGTCCTGACCACCCGGGGTGCGCGCAGCGGCAAGCTGCGCAAGACGCCGCTG------ATGCGCGTCGAGCACGAGGGCCGC------TATGCCGTGGTCGCCTCTCTCGGCGGGGCGCCCAAGCACCCCGTCTGGTACTTCAACGTGAAGGCCGATCCCCGGGTGGAGCTCCAGGACGGTCCGGTGAAGCAGGACATGACGGCG---CGTGAGGTCACC------GGCGCGGAGAAGGCCCGGTGGTGGGAGCGCGCGGTCGCGGCGTATCCGTCG---TACGCCGACTACCAGAAGAAGACGGAACGGGAG...ATCCCC---------GTCTTCGTCCTGGAGCCG
TRN  11011111101111111
NAM  Y1584_MYCBO/13-143
ASQ  D-WS-REQADTYMKSGG-TEGTQLQ..G-KP.VILLTTVGAKTGKLRKTPL--MRVEHDGQ--YAIVASLGGAPKNPVWYHNVVKNPRVELQDGTVTGDYDA-REVF--GDEKAIWWQRAVAVWPD-YASYQTKTDRQ.IP---VFVLTP
DSQ  GAC---TGGTCG---CGCGAGCAAGCCGACACGTATATGAAGTCCGGCGGA---ACCGAGGGCACACAGCTGCAG......GGA---AAGCCG...GTCATCCTGCTCACCACCGTCGGGGCGAAGACCGGCAAACTCCGTAAGACCCCGCTG------ATGCGCGTCGAGCACGACGGCCAG------TACGCGATCGTCGCCTCGCTGGGTGGGGCGCCGAAAAATCCGGTCTGGTACCACAACGTCGTGAAGAACCCACGGGTCGAGCTGCAGGACGGCACCGTGACCGGCGACTACGACGCC---CGCGAGGTGTTC------GGTGACGAGAAGGCCATCTGGTGGCAGCGCGCCGTGGCGGTCTGGCCGGAC---TATGCCAGCTACCAGACCAAGACGGACCGCCAG...ATTCCG---------GTGTTCGTGCTGACCCCG
TRN  11011101101011011
NAM  P95144_MYCTU/6-129
ASQ  N-LK-REFVHRVQRFVVNPIGRQLP..M---.-TMLETIGRKTGQPRRTAV--GGRVVDNQ--FWMVSEHG---EHSDYVYNIKANPAVRVRIGGRWRSGTA-YLLPD-DDPRQRLRGLPRLNSAG---VRAMGTD-L.LT---IRVDLD
DSQ  AAT---CTCAAG---CGGGAATTCGTCCATCGCGTGCAACGGTTCGTGGTCAATCCAATCGGCCGGCAACTGCCG......ATG---------...---ACCATGCTCGAAACCATCGGCCGCAAAACGGGACAGCCGCGGCGTACCGCGGTG------GGCGGGCGCGTCGTAGACAACCAG------TTCTGGATGGTGTCCGAGCACGGC---------GAGCATTCCGATTACGTCTACAACATCAAGGCCAACCCCGCCGTGCGGGTCCGCATCGGCGGCCGATGGCGCAGTGGGACCGCC---TACCTGCTACCCGAC---GACGATCCGAGGCAGCGGCTGCGCGGCCTACCCCGGCTGAACAGTGCCGGC---------GTACGCGCGATGGGCACCGAC---TTG...CTGACC---------ATCCGGGTGGATTTGGAC
TRN  10010101100011011
NAM  Q9KZZ9_STRCO/8-133
ASQ  ERKY-RTVTAFQRRLNA--VVRRLP..G---.QTLLETTGRVSGLPRRTPV--GGRREGDS--FWLVSEFG---ERSQYIRNIRADPRVRVRIRGRWHPGTA-HLLPD-DDPLARLRRLPRLNSVA---VRAMGVGTGlLT---VRVELE
DSQ  GAGCGGAAGTAC---CGGACCGTCACGGCCTTCCAGCGCCGGCTGAACGCC------GTGGTGCGCCGGCTGCCC......GGC---------...CAGACCCTGCTGGAGACCACCGGCCGCGTTTCGGGCCTCCCCCGCCGCACACCGGTG------GGCGGCCGCCGGGAGGGCGATTCC------TTCTGGCTGGTCTCGGAGTTCGGC---------GAGCGCTCGCAGTACATCCGCAACATCCGGGCCGACCCGCGGGTGCGGGTGCGCATCCGGGGCCGCTGGCACCCGGGGACGGCC---CACCTCCTTCCCGAC---GACGACCCGCTCGCCCGCCTGCGCCGCCTCCCCCGCCTCAACAGCGTGGCG---------GTGCGGGCGATGGGCGTCGGGACGGGGctgCTGACG---------GTACGGGTGGAGTTGGAG
TRN  11011111101111111
NAM  Q9K447_STRCO/18-139
ASQ  RRLAARAPILLFRAGLGPLLGRRF-..----.-LLLHHVGRVSGSDRRAVLEVVAYEAPYR--CWTVAS--GFGPRSDWYRNLRAQPKTVVQFGNRHHAVTA-RFLA--SDEGADI-------MTD-YGRRHPRTARR.LC---AYLGLP
DSQ  CGCCGGCTGGCCGCTCGCGCGCCCATCCTTCTGTTCCGGGCCGGACTGGGGCCCCTGCTCGGCAGACGGTTT---......------------...---CTGCTGCTGCACCACGTGGGCCGGGTCAGTGGAAGCGACCGCCGGGCGGTTCTCGAAGTCGTGGCGTACGAGGCGCCGTACCGC------TGCTGGACGGTCGCCTCC------GGCTTCGGTCCGCGCTCCGACTGGTACCGCAACCTGCGTGCCCAGCCGAAGACGGTCGTGCAGTTCGGCAACCGCCACCACGCCGTCACCGCC---CGTTTCCTCGCT------TCGGACGAGGGCGCCGACATC---------------------ATGACGGAC---TACGGGCGGCGCCACCCGCGCACCGCCCGTCGG...CTGTGC---------GCGTACCTGGGTCTGCCC
TRN  10010101100011011
NAM  O06389_MYCTU/4-129
ASQ  PQWL-----ARFNRYVTNPIQRLWA..GWLPaFAILEHVGRRSGKPYRTPLNVFSADVDGRAGVAILLTYG---PNRDWLKNITAAGGGRMRRYGKTFGVANPRRLT-----KAEA-----APYVS---SRWRPVFAR.LPFDEAVLLTK
DSQ  CCGCAGTGGCTG---------------GCTCGGTTCAATCGATATGTCACCAACCCCATTCAGCGGCTATGGGCC......GGCTGGCTCCCGgcgTTCGCGATTCTTGAGCACGTGGGCCGCCGCTCGGGCAAGCCGTACCGTACCCCGTTGAACGTGTTCAGCGCGGACGTCGACGGCCGGGCGGGCGTGGCGATTTTGCTCACCTACGGT---------CCGAACCGCGACTGGCTGAAGAACATCACCGCGGCCGGCGGTGGCCGGATGCGCCGCTACGGCAAAACCTTTGGTGTCGCCAACCCGCGGCGGCTCACC---------------AAGGCCGAGGCG---------------GCGCCGTATGTCAGC---------AGCCGATGGCGGCCGGTCTTTGCCAGA...CTGCCGTTCGACGAGGCCGTACTGCTCACCAAG
TRN  10010101100011011
//