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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04049 - APC8)
FAM  PF04049
PID  APC8
DES  Anaphase promoting complex subunit 8 / Cdc23
IPR  IPR007192
ANO  4
ALN  179
AID  0.371908
APH  (Q9STS3_ARATH/1-161:0.75255,CUT23_SCHPO/8-156:0.56444,(CDC23_HUMAN/10-144:0.62795,Q9I7L8_DROME/10-139:0.62898):0.25367);
ATP  (Q9STS3_ARATH/1-161,CUT23_SCHPO/8-156,(CDC23_HUMAN/10-144,Q9I7L8_DROME/10-139));
ATL  2.82759
DNO  4
DLN  537
DID  0.440716
DPH  (Q9STS3_ARATH/1-161:33.35899,CUT23_SCHPO/8-156:23.36475,(CDC23_HUMAN/10-144:33.41999,Q9I7L8_DROME/10-139:20.63366):14.77746);
DTP  (Q9STS3_ARATH/1-161,CUT23_SCHPO/8-156,(CDC23_HUMAN/10-144,Q9I7L8_DROME/10-139));
DTL  125.549
RID  0.371908
RPH  (Q9STS3_ARATH/1-161:0.75255,CUT23_SCHPO/8-156:0.56444,(CDC23_HUMAN/10-144:0.62795,Q9I7L8_DROME/10-139:0.62898):0.25367);
RTP  (Q9STS3_ARATH/1-161,CUT23_SCHPO/8-156,(CDC23_HUMAN/10-144,Q9I7L8_DROME/10-139));
RTL  2.82759
LNK  CDC23_HUMAN/10-144:Q9UJX2:AF053977
LNK  CUT23_SCHPO/8-156:O94556:Z98533
LNK  Q9I7L8_DROME/10-139:Q9I7L8:AE003666
LNK  Q9STS3_ARATH/1-161:Q9STS3:AL096856
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9STS3_ARATH/1-161
ASQ  MVSKECCR------NEIRAAIRQLS----DRCLYSAAKWAGEQLVGIEQDPSNFTPANTRFQRGSSSIRRRFSTNESISTP------LPSVGFSQAATPLPEEDEAIDGDIYLLAKSYFDCREYRRASHMLRDQVSKKSLFLRYYALYLAGEKR--KEEEMIELEGPLGKSDAINRELV
DSQ  ATGGTCTCTAAAGAGTGTTGCCGA------------------AACGAAATACGTGCGGCTATTCGACAGCTTAGC------------GACCGCTGTTTATACTCCGCCGCAAAGTGGGCAGGAGAGCAGCTTGTGGGGATAGAGCAAGACCCGTCTAATTTTACACCTGCGAATACGAGGTTTCAGCGAGGAAGCTCTAGCATCCGGAGAAGGTTCAGCACCAATGAATCTATTTCAACACCG------------------TTACCTTCCGTTGGCTTCTCTCAAGCAGCTACTCCTCTCCCGGAAGAAGATGAAGCGATTGATGGTGACATTTACCTTTTAGCAAAGTCCTATTTTGATTGTCGAGAGTATAGACGGGCCTCCCATATGCTTCGTGACCAAGTGAGCAAGAAATCACTGTTCTTGCGTTACTATGCGCTTTATCTGGCTGGAGAAAAACGG------AAAGAGGAAGAAATGATAGAACTTGAAGGCCCTTTGGGTAAGAGTGATGCCATAAACCGTGAACTGGTA
TRN  10010101100011000
NAM  CUT23_SCHPO/8-156
ASQ  MMGVDGLE-DQEQLREIRNCLLKCISECSERGLVYAVRWAAEMLNGMNPIEMEHIPF--------------------SSTPTGEFDLDPDMANEKLLE---VE----EKNIYLLAKSYFDCKEFERAAYTLQNCKSSKSIFLRLYSKYLAGEKKSEEENETLLNTNLTLS--STNREFY
DSQ  ATGATGGGAGTTGATGGACTCGAA---GACCAAGAACAACTACGAGAGATTCGTAATTGTCTTTTAAAGTGTATTTCTGAATGCTCTGAAAGAGGTTTAGTTTACGCTGTACGATGGGCAGCTGAAATGCTCAATGGAATGAATCCTATTGAAATGGAACATATTCCATTT------------------------------------------------------------TCATCGACCCCTACTGGAGAGTTCGATTTGGATCCTGATATGGCTAATGAAAAGCTACTAGAG---------GTTGAG------------GAGAAAAATATTTATTTGCTTGCAAAGTCTTATTTCGATTGTAAAGAGTTTGAGAGGGCAGCTTATACTTTGCAAAACTGCAAATCGTCTAAATCGATATTCCTACGATTGTATAGTAAGTACTTGGCAGGTGAAAAGAAAAGTGAAGAAGAAAATGAAACCTTATTAAATACGAACCTAACACTATCA------TCTACAAACCGAGAATTTTAT
TRN  10010101110011000
NAM  Q9I7L8_DROME/10-139
ASQ  LLP--DVK------RELRRGIIECS----KRGLLHSTKWLAEMHHGLADVHIDNE------------------------AP------DEDRTFSECQL---EGIAPEEYSDYFLAKSYYDVREYDRAAHAVRNCESSVPRFLHFYSSYMAREKR--RLDSTTDQANLHEP--NQMRDLA
DSQ  CTGCTGCCG------GATGTGAAG------------------CGGGAGCTGCGCCGCGGGATCATCGAGTGCTCC------------AAGCGGGGCCTCCTGCACAGCACCAAGTGGCTGGCGGAAATGCATCACGGACTGGCCGATGTGCACATAGACAATGAG------------------------------------------------------------------------GCGCCT------------------GATGAGGATCGCACATTCAGCGAGTGTCAGCTG---------GAGGGGATTGCGCCGGAGGAGTACAGCGACTACTTCCTGGCCAAGAGCTACTACGACGTGAGGGAGTACGACAGGGCGGCGCATGCGGTCAGGAACTGCGAGTCCAGTGTTCCGCGCTTCCTGCACTTCTATTCCAGCTACATGGCCAGGGAAAAGCGG------CGACTGGACTCGACCACGGACCAGGCGAATCTGCACGAACCG------AATCAGATGCGCGATCTCGCC
TRN  10010101100011011
NAM  CDC23_HUMAN/10-144
ASQ  VAPVLSINSDFSDLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAEL------------------------QP------PPPITEEDAQ----------DMDAYTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKK--KDDETVDSLGPLEK--GQVKNEA
DSQ  GTGGCGCCTGTCCTGTCCATAAACAGCGATTTCTCAGATTTGCGGGAAATTAAAAAGCAACTGCTGCTTATTGCGGGCCTTACCCGGGAGCGGGGCCTACTACACAGTAGCAAATGGTCGGCGGAGTTGGCTTTCTCTCTCCCTGCATTGCCTCTGGCCGAGCTG------------------------------------------------------------------------CAACCG------------------CCTCCGCCTATTACAGAGGAAGATGCCCAG------------------------------GATATGGATGCCTATACCCTGGCCAAGGCCTACTTTGACGTTAAAGAGTATGATCGGGCAGCACATTTCCTGCATGGCTGCAATAGCAAGAAAGCCTATTTTCTGTATATGTATTCCAGATATCTGTCTGGAGAAAAAAAG------AAGGACGATGAAACAGTTGATAGCTTAGGCCCCCTGGAAAAA------GGACAAGTGAAAAATGAGGCG
TRN  10010101100011000
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