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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04045 - P34-Arc)
FAM  PF04045
PID  P34-Arc
DES  Arp2/3 complex, 34 kD subunit p34-Arc
IPR  IPR007188
ANO  5
ALN  270
AID  0.478884
APH  (((AR34_YEAST/55-318:0.74614,AR34_SCHPO/51-304:0.36914):0.08652,AR34_DICDI/49-279:0.59781):0.30531,AR34_DROME/56-286:0.15452,AR34_HUMAN/56-286:0.12431);
ATP  (((AR34_YEAST/55-318,AR34_SCHPO/51-304),AR34_DICDI/49-279),AR34_DROME/56-286,AR34_HUMAN/56-286);
ATL  2.37151
DNO  5
DLN  810
DID  0.518321
DPH  (AR34_YEAST/55-318:0.45766,((AR34_DROME/56-286:0.21031,AR34_HUMAN/56-286:0.23877):0.17402,AR34_SCHPO/51-304:0.39451):0.12690,AR34_DICDI/49-279:0.39213);
DTP  (AR34_YEAST/55-318,((AR34_DROME/56-286,AR34_HUMAN/56-286),AR34_SCHPO/51-304),AR34_DICDI/49-279);
DTL  1.99431
RID  0.478884
RPH  (((AR34_YEAST/55-318:0.74614,AR34_SCHPO/51-304:0.36914):0.08652,AR34_DICDI/49-279:0.59781):0.30531,AR34_DROME/56-286:0.15452,AR34_HUMAN/56-286:0.12431);
RTP  (((AR34_YEAST/55-318,AR34_SCHPO/51-304),AR34_DICDI/49-279),AR34_DROME/56-286,AR34_HUMAN/56-286);
RTL  2.37151
LNK  AR34_DICDI/49-279:O96623:AF095931
LNK  AR34_DROME/56-286:Q9VIM5:AE003666
LNK  AR34_HUMAN/56-286:O15144:AF006085
LNK  AR34_SCHPO/51-304:O14241:Z98981
LNK  AR34_YEAST/55-318:P53731:Z71650
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  AR34_YEAST/55-318
ASQ  LLSVKTKAWVSVSECQLDGSLTLLKFLADHYSSLGGVTIPSEVEPGYDYTLQITLAELVQESILQLSVLKTIILSFPFELAISKFIELSQQQPAPVEAEITGGEVAANGDN-----TLFTIKYRDEENIFIKPSNDRVTIIFETIFQDETDKIFGKVFLQEFVDARKRNRQIQSAPQVLYSH-EPPLELKRLYQPPKVAEQSRRFITFVLFPRHFQTKElQFHSICQLTLFRNYFHYHIKCSKAYMHSRMRFRVDSFIKVLNRAKVDEDD
DSQ  TTGTTGAGTGTTAAGACCAAAGCTTGGGTAAGTGTCTCTGAGTGCCAATTGGACGGTTCTTTGACGTTACTGAAGTTTCTGGCCGACCACTACTCCTCTTTGGGTGGGGTGACTATCCCAAGTGAAGTGGAGCCCGGCTATGACTACACTCTTCAGATTACGTTGGCCGAATTGGTTCAAGAATCGATTTTACAACTGTCTGTTTTGAAGACCATTATATTGAGTTTTCCCTTCGAATTGGCCATTTCGAAGTTTATTGAACTAAGCCAGCAGCAACCGGCACCTGTCGAAGCAGAAATTACTGGCGGTGAGGTTGCTGCCAATGGAGACAAC---------------ACTTTGTTCACAATCAAGTATCGTGACGAGGAGAACATCTTCATCAAACCTTCCAATGACAGAGTTACCATAATCTTCGAGACTATTTTTCAAGACGAAACAGATAAAATTTTTGGCAAGGTCTTTTTACAAGAATTCGTGGATGCACGTAAGAGAAACCGTCAAATCCAATCCGCTCCACAAGTTTTATACTCACAT---GAACCACCATTGGAGTTGAAGAGACTATATCAACCACCTAAAGTTGCAGAGCAAAGTAGAAGATTTATCACGTTTGTTCTTTTCCCACGTCATTTCCAGACAAAAGAGttgCAATTCCATTCAATTTGCCAGTTAACATTGTTTAGAAACTACTTCCATTATCACATAAAGTGCTCTAAAGCCTACATGCACTCCAGAATGAGATTCAGAGTGGACTCGTTCATCAAAGTCTTAAATAGAGCCAAGGTGGACGAAGATGAT
TRN  10010101100011000
NAM  AR34_SCHPO/51-304
ASQ  LISLSMKCYP---ELVNYGTLDLLK-------QIYGAYVHE-PEMGYNFSILIDLQQLPATDEEKEQLAMSISM-LKRNVLAAPFHRAFTKQAELADLARKDPENAPMLDKQATSQELMAIHYRDEETIVLWPEHDRVTVVFSTKFREETDRIFGKVFLQEFVDARRRP-AIQTAPQVLFSYRDPPLEIRDIQG-IQKGD-DFGFVTFVLFERHFTPQN.REDCISHIQVFRNTLHFHIKASKAYMHQRMRKRVADFQKVLNRAKPDVEL
DSQ  TTGATCAGTCTGTCTATGAAATGCTATCCT---------GAGCTTGTTAATTACGGTACTCTGGATTTACTGAAA---------------------CAGATTTACGGTGCTTATGTGCATGAA---CCTGAAATGGGATACAACTTCAGTATTCTTATAGACTTACAACAACTTCCCGCTACCGATGAGGAAAAAGAACAATTAGCTATGTCTATTTCTATG---TTAAAAAGAAACGTTTTAGCTGCTCCCTTCCACCGTGCATTCACCAAACAAGCCGAACTAGCTGATTTGGCTCGTAAAGACCCGGAAAATGCCCCTATGCTTGACAAGCAAGCCACTTCTCAGGAGCTCATGGCAATTCATTATCGTGATGAAGAAACTATTGTTTTATGGCCTGAGCATGATCGCGTTACAGTCGTCTTTTCAACGAAATTCCGTGAAGAGACTGATCGCATCTTTGGCAAGGTATTCTTGCAGGAATTCGTTGATGCCCGTCGCCGTCCG---GCTATTCAAACCGCTCCTCAAGTGCTCTTTTCCTATAGAGATCCACCTTTGGAGATTCGTGATATTCAGGGT---ATTCAAAAGGGTGAT---GACTTTGGATTTGTAACATTCGTTTTATTTGAGCGTCATTTTACACCTCAAAAT...CGTGAAGATTGCATATCTCATATCCAGGTTTTCCGCAACACCCTACACTTTCACATTAAGGCTTCCAAGGCTTACATGCACCAACGTATGCGTAAGCGTGTTGCTGACTTCCAAAAGGTTTTGAACCGGGCCAAGCCCGATGTGGAATTG
TRN  10010101100011000
NAM  AR34_HUMAN/56-286
ASQ  MVSISLKFYK---ELQAHGADELLK-------RVYGSFLVN-PESGYNVSLLYDLENLPAS---KDSIVHQAGM-LKRNCFASVFEKYFQFQEEGKEGENR-----------------AVIHYRDDETMYVESKKDRVTVVFSTVFKDDDDVVIGKVFMQEFKEGRR---ASHTAPQVLFSHREPPLELKDTD--AAVGD-NIGYITFVLFPRHTNASA.RDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEK
DSQ  ATGGTCAGTATTTCTTTGAAATTCTACAAG---------GAACTTCAGGCACATGGTGCTGATGAGTTATTAAAG---------------------AGGGTGTACGGGAGTTTCTTGGTAAAT---CCAGAATCAGGATACAATGTCTCTTTGCTATATGACCTTGAAAATCTTCCGGCATCC---------AAGGATTCCATTGTGCATCAAGCTGGCATG---TTGAAGCGAAATTGTTTTGCCTCTGTCTTTGAAAAATACTTCCAATTCCAAGAAGAGGGCAAGGAAGGAGAGAACAGG---------------------------------------------------GCAGTTATCCATTATAGGGATGATGAGACCATGTATGTTGAGTCTAAAAAGGACAGAGTCACAGTAGTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTGTTCATGCAGGAGTTCAAAGAAGGACGCAGA---------GCCAGCCACACAGCCCCACAGGTCCTCTTTAGCCACAGGGAACCTCCTCTGGAGCTGAAAGACACAGAC------GCCGCTGTGGGTGAC---AACATTGGCTACATTACCTTTGTGCTGTTCCCTCGTCACACCAATGCCAGTGCT...CGAGACAACACCATCAACCTGATCCACACGTTCCGGGACTACCTGCACTACCACATCAAGTGCTCTAAGGCCTATATTCACACACGTATGCGGGCGAAAACGTCTGACTTCCTCAAGGTGCTGAACCGCGCACGCCCAGATGCCGAGAAA
TRN  10010101100011000
NAM  AR34_DROME/56-286
ASQ  RISISLKFYK---QLQEHGADELLK-------REYGSLLTD-TEEGYNVSVLINLEEIPED---CEQIAKRIGL-LKRNCFASVFEKYFDYQEQGEEGQKR-----------------AVINYRNDETLYVEAKPDRVTVVFSTIFRDEDDVIIGKVFMQELREGRR---ASHTAPQVLFSHREPPLELANTD--ARVGD-NIGYVTFVLFPRHTNKET.RDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTSDFLKVLNRARPEPKN
DSQ  CGGATCAGCATATCGCTGAAGTTCTACAAA---------CAGCTGCAAGAACATGGAGCCGACGAGTTGCTGAAG---------------------CGTGAATATGGCAGTCTGCTTACAGAC---ACGGAAGAAGGCTACAATGTTTCCGTACTTATCAACCTGGAGGAGATTCCCGAGGAC---------TGCGAGCAAATCGCAAAGAGAATCGGACTG---CTGAAGCGCAACTGTTTCGCATCGGTTTTTGAAAAGTATTTTGACTATCAGGAGCAGGGCGAAGAGGGCCAAAAGCGT---------------------------------------------------GCCGTCATTAACTACCGCAACGATGAGACTTTATATGTGGAAGCCAAGCCTGATCGTGTCACCGTCGTCTTTAGTACCATTTTCCGGGACGAAGACGATGTCATTATCGGCAAAGTATTTATGCAGGAATTGAGGGAAGGTCGGCGT---------GCCTCGCACACCGCACCACAAGTGCTCTTTTCGCACCGAGAACCACCATTGGAATTGGCCAACACGGAC------GCTAGGGTGGGCGAC---AACATTGGCTATGTCACATTCGTACTCTTCCCTCGGCATACCAACAAAGAAACA...AGGGACAATACCATTAACTTAATTCACATGTTCCGAGATTACTTGCACTACCACATTAAGTGTTCAAAGGCTTACATTCATTCGCGCATGCGAGCAAAAACCTCGGATTTCCTCAAGGTGCTAAATCGTGCAAGGCCAGAGCCCAAAAAC
TRN  10010101100011000
NAM  AR34_DICDI/49-279
ASQ  MVSVSLHAAA---DLLKNGGSALLK-------SVYGDMLQAKPEGGYDVTLVI-QSSFSGN---KEELAKKVSL-LKRHLVAAPFLMVFEGIEAKKPLPEI-----------------IAINYRTDETFYLKPQGDNVIVIFDIAFKDADDVILSKIFLQSFVDVRK---TISNVPSITFSQKDPPLELKGVKG-VRAGQANHGFVSFVLFPAHIKKP-.-QESADLIQTFRDYLHYHIKCAKGYMHTSMRNRVESLIQVLNRAKPEPVN
DSQ  ATGGTATCTGTTTCACTCCACGCTGCAGCT---------GATCTCTTAAAGAATGGTGGTTCCGCCCTCCTCAAA---------------------AGTGTTTATGGTGATATGCTTCAAGCAAAACCAGAAGGTGGTTATGATGTTACACTCGTCATT---CAATCATCATTCTCTGGTAAT---------AAAGAGGAACTTGCAAAAAAAGTTAGTTTA---TTAAAAAGACATTTAGTTGCTGCTCCATTTTTAATGGTATTTGAAGGTATTGAAGCAAAGAAACCACTTCCAGAAATT---------------------------------------------------ATTGCAATCAACTATCGTACTGATGAAACCTTTTACTTAAAACCACAAGGTGACAATGTCATTGTTATCTTTGATATTGCTTTCAAAGATGCTGATGATGTCATTTTATCAAAAATCTTTTTACAATCATTTGTTGATGTTCGTAAG---------ACAATTTCAAATGTACCATCAATTACTTTCTCTCAAAAAGATCCACCACTTGAATTAAAAGGTGTCAAAGGT---GTTAGAGCAGGTCAAGCAAACCACGGTTTTGTTTCATTTGTACTTTTCCCAGCTCATATCAAGAAACCA---...---CAAGAATCAGCCGATCTCATCCAAACATTCAGAGATTATTTACACTATCATATTAAATGTGCTAAAGGTTACATGCACACCAGTATGAGAAACCGTGTCGAATCACTCATTCAAGTACTCAATCGTGCTAAACCAGAACCAGTTAAC
TRN  10010101110011000
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