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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF03919 - mRNA_cap_C)
FAM  PF03919
PID  mRNA_cap_C
DES  mRNA capping enzyme, C-terminal domain
IPR  IPR001339
ANO  11
ALN  139
AID  0.353181
APH  ((Q9VY44_DROME/500-599:0.32172,(Q9AVW1_GUITH/229-328:1.63217,(((Q9SS77_ARATH/539-646:0.34433,Q9LFA7_ARATH/484-582:0.09392):0.08073,Q9S9L3_ARATH/495-593:0.35606):0.59867,(MCE_CHVP1/239-325:1.00120,(MCE1_SCHPO/245-358:0.40747,MCE1_CANAL/246-372:0.82938):0.17597):0.49785):0.29166):0.14605):0.12026,(MCE1_HUMAN/463-560:0.09941,Q9IA93_XENLA/464-561:0.13257):0.16835,MCE1_CAEEL/482-585:0.59603);
ATP  ((Q9VY44_DROME/500-599,(Q9AVW1_GUITH/229-328,(((Q9SS77_ARATH/539-646,Q9LFA7_ARATH/484-582),Q9S9L3_ARATH/495-593),(MCE_CHVP1/239-325,(MCE1_SCHPO/245-358,MCE1_CANAL/246-372))))),(MCE1_HUMAN/463-560,Q9IA93_XENLA/464-561),MCE1_CAEEL/482-585);
ATL  7.8938
DNO  11
DLN  417
DID  0.457961
DPH  (((((MCE1_SCHPO/245-358:0.38484,MCE1_CANAL/246-372:0.54834):0.04926,(Q9AVW1_GUITH/229-328:0.83582,MCE_CHVP1/239-325:0.50726):0.15327):0.19106,(MCE1_CAEEL/482-585:0.40873,((MCE1_HUMAN/463-560:0.11996,Q9IA93_XENLA/464-561:0.18097):0.18096,Q9VY44_DROME/500-599:0.28247):0.14087):0.18212):0.40079,Q9S9L3_ARATH/495-593:0.22472):0.05757,Q9SS77_ARATH/539-646:0.26720,Q9LFA7_ARATH/484-582:0.06915);
DTP  (((((MCE1_SCHPO/245-358,MCE1_CANAL/246-372),(Q9AVW1_GUITH/229-328,MCE_CHVP1/239-325)),(MCE1_CAEEL/482-585,((MCE1_HUMAN/463-560,Q9IA93_XENLA/464-561),Q9VY44_DROME/500-599))),Q9S9L3_ARATH/495-593),Q9SS77_ARATH/539-646,Q9LFA7_ARATH/484-582);
DTL  5.23027
RID  0.353181
RPH  ((Q9VY44_DROME/500-599:0.32172,(Q9AVW1_GUITH/229-328:1.63217,(((Q9SS77_ARATH/539-646:0.34433,Q9LFA7_ARATH/484-582:0.09392):0.08073,Q9S9L3_ARATH/495-593:0.35606):0.59867,(MCE_CHVP1/239-325:1.00120,(MCE1_SCHPO/245-358:0.40747,MCE1_CANAL/246-372:0.82938):0.17597):0.49785):0.29166):0.14605):0.12026,(MCE1_HUMAN/463-560:0.09941,Q9IA93_XENLA/464-561:0.13257):0.16835,MCE1_CAEEL/482-585:0.59603);
RTP  ((Q9VY44_DROME/500-599,(Q9AVW1_GUITH/229-328,(((Q9SS77_ARATH/539-646,Q9LFA7_ARATH/484-582),Q9S9L3_ARATH/495-593),(MCE_CHVP1/239-325,(MCE1_SCHPO/245-358,MCE1_CANAL/246-372))))),(MCE1_HUMAN/463-560,Q9IA93_XENLA/464-561),MCE1_CAEEL/482-585);
RTL  7.8938
LNK  MCE1_CAEEL/482-585:Q17607:Z75525
LNK  MCE1_CANAL/246-372:P78587:D83180
LNK  MCE1_HUMAN/463-560:O60942:AB009022
LNK  MCE1_SCHPO/245-358:P40997:U16143
LNK  MCE_CHVP1/239-325:Q84424:U42580
LNK  Q9AVW1_GUITH/229-328:Q9AVW1:AJ010592
LNK  Q9IA93_XENLA/464-561:Q9IA93:AF218793
LNK  Q9LFA7_ARATH/484-582:Q9LFA7:AL137189
LNK  Q9S9L3_ARATH/495-593:Q9S9L3:AF177535
LNK  Q9SS77_ARATH/539-646:Q9SS77:AC009326
LNK  Q9VY44_DROME/500-599:Q9VY44:AE003495
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  MCE1_CANAL/246-372
ASQ  EENTVDFQLEFVFNEV--QDPDLDERDPTSTYLDYDAKPNLIKLRVWQGSN-----VHTDFAKLDLSDDDWERLKALEQPLQGRIAECRQ--STTKKGY-.-WEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIE
DSQ  GAAGAGAACACTGTTGATTTTCAATTAGAGTTTGTTTTCAATGAAGTG------CAAGATCCAGACTTGGACGAAAGAGACCCAACATCAACTTATCTAGACTACGATGCTAAACCGAATTTAATAAAATTGAGAGTATGGCAAGGTAGCAAT---------------GTACATACTGATTTTGCCAAGTTAGATCTATCAGATGATGATTGGGAAAGATTGAAGGCACTAGAGCAACCATTACAAGGCAGGATTGCTGAATGTCGCCAA------TCTACAACTAAGAAGGGATAT---...---TGGGAAATGCTTCGATTCAGAAACGATAAAAGTAATGGAAATCATATCAGTGTGGTGGAAAAGATTTTGGTATCCATCAAGGATGGTGTCAAAGAGAAAGAAGTCATTGAG
TRN  10010101110011000
NAM  MCE1_SCHPO/245-358
ASQ  EMNTIDFMLKLEFA------------QPEEGDIDYSAMPEFQLGVWEGRNMYSFFAFMYVDEK------EWEKLKSFNVPLSERIVECYL--DD--ENR-.-WRFLRFRDDKRDANHISTVKSVLQSIEDGVSKEDLLK
DSQ  GAAATGAATACAATAGACTTTATGCTAAAGCTGGAATTTGCA------------------------------------CAGCCTGAAGAAGGGGACATTGATTATTCAGCCATGCCAGAATTTCAACTTGGTGTATGGGAGGGTAGGAACATGTACTCTTTTTTTGCCTTCATGTATGTTGATGAAAAA------------------GAATGGGAAAAATTGAAAAGCTTTAATGTTCCTTTATCGGAAAGAATAGTAGAGTGCTATCTG------GATGAT------GAAAATCGT---...---TGGAGATTTTTACGTTTTCGTGATGATAAACGAGATGCAAACCATATCAGTACAGTTAAAAGTGTATTGCAGAGCATAGAAGATGGCGTTTCTAAAGAAGACCTTCTCAAA
TRN  10010101100011000
NAM  MCE_CHVP1/239-325
ASQ  THHTIDFIIMSEDGTIGIFDPNL-RKNVPVGKLD-------------GYYN------------------------------KGSIVECGF-----ADGT-.-WKYIQGRSDKNQANDRLTYEKTLLNIEENITIDELLD
DSQ  ACCCACCATACTATTGACTTCATTATCATGAGCGAAGATGGGACAATCGGCATCTTCGATCCTAATTTG---AGGAAGAATGTTCCCGTCGGAAAACTTGAT---------------------------------------GGTTATTACAAT------------------------------------------------------------------------------------------AAGGGTTCTATCGTAGAATGTGGATTC---------------GCTGATGGAACG---...---TGGAAATATATTCAGGGGCGTTCTGACAAAAACCAAGCAAATGATCGTTTGACATACGAAAAGACACTACTGAACATCGAGGAAAACATTACGATTGACGAATTGCTTGAT
TRN  10010101100011011
NAM  Q9VY44_DROME/500-599
ASQ  ELNSVDFRLKIITE--RGE-GLL---TKKVGFL-YV-----------GGHDAP-YGRMQ-------------RLTKETRELDNRIVECTM--NQ--FGN-.-WDFMRERTDKKNPNSYNTARSVVDSIKHPVTKEYLLN
DSQ  GAGCTCAACTCGGTGGACTTTCGGCTGAAGATCATAACAGAG------CGCGGCGAG---GGCTTGCTG---------ACGAAAAAGGTGGGCTTCCTC---TATGTC---------------------------------GGCGGACACGATGCACCC---TATGGACGGATGCAA---------------------------------------AGGTTAACGAAGGAGACCAGAGAATTGGACAACAGAATCGTTGAGTGCACCATG------AATCAG------TTTGGCAAC---...---TGGGACTTTATGCGCGAGCGAACGGACAAAAAGAATCCCAACAGTTATAATACAGCCCGCTCCGTTGTGGACAGCATAAAGCATCCAGTCACCAAGGAGTACCTACTAAAC
TRN  10010101100011010
NAM  Q9IA93_XENLA/464-561
ASQ  NLNSVDFLLKITKV--GGE-GLL---TRNVGLL-YV-----------GKYDCP-F------SEI--------KVTKDLKQYENKIIECKF--EN---NR-.-WVFMRQRVDKSFPNSYATAMAVCNSIKNPVTKEILFD
DSQ  AACTTGAATTCTGTGGACTTCTTACTAAAGATTACAAAAGTT------GGAGGTGAA---GGACTTCTG---------ACGCGAAATGTTGGTCTTCTG---TATGTT---------------------------------GGAAAATATGACTGTCCT---TTC------------------TCTGAAATA------------------------AAGGTAACAAAAGATCTGAAACAATATGAAAACAAAATCATTGAGTGCAAGTTT------GAGAAC---------AACAGA---...---TGGGTTTTCATGCGACAAAGAGTTGATAAAAGCTTTCCAAATTCTTATGCCACAGCTATGGCTGTGTGCAATAGTATCAAAAATCCCGTGACTAAGGAAATCCTGTTTGAC
TRN  10010101100011010
NAM  MCE1_HUMAN/463-560
ASQ  SLNSVDFRLKITRM--GGE-GLL---PQNVGLL-YV-----------GGYERP-F------AQI--------KVTKELKQYDNKIIECKF--EN---NS-.-WVFMRQRTDKSFPNAYNTAMAVCNSISNPVTKEMLFE
DSQ  AGTCTGAATTCTGTGGATTTTCGTCTAAAAATAACAAGAATG------GGAGGAGAA---GGGTTACTT---------CCTCAGAATGTTGGCCTCCTG---TATGTT---------------------------------GGAGGTTATGAAAGACCC---TTT------------------GCACAAATC------------------------AAGGTGACAAAAGAGCTGAAACAGTATGACAACAAAATTATAGAATGCAAATTT------GAGAAC---------AACAGC---...---TGGGTCTTCATGAGACAGAGAACAGACAAAAGTTTTCCTAATGCCTACAACACTGCCATGGCTGTGTGTAACAGCATCTCAAACCCTGTCACCAAGGAGATGCTGTTTGAG
TRN  10010101100011000
NAM  MCE1_CAEEL/482-585
ASQ  SHNSVDFLLKVEKKC---KEGML---PEWIGYL-FVQ----------NLSD-PF---------------GTMKATATLKKYHNKIIECTLLVDN--QGRPkEWKFMRERTDKSLPNGLRTAENVVETMVNPVTETYLIE
DSQ  TCTCACAACTCTGTTGATTTTCTACTGAAAGTTGAAAAGAAATGT---------AAAGAAGGAATGCTT---------CCCGAATGGATTGGATATTTA---TTTGTCCAG------------------------------AATCTTTCCGAT---CCATTT---------------------------------------------GGCACAATGAAAGCAACGGCAACTCTCAAAAAGTATCATAATAAAATTATCGAATGTACACTGCTGGTTGATAAT------CAAGGACGGCCAaaaGAGTGGAAATTTATGCGAGAAAGAACAGATAAATCGTTGCCGAATGGATTACGAACTGCGGAAAATGTCGTTGAAACTATGGTGAATCCTGTCACTGAAACCTATTTAATTGAG
TRN  10010101100011010
NAM  Q9S9L3_ARATH/495-593
ASQ  --ETLDFLFDMDKY----GRQML--FLQERGRMKLME-----------GFAVEF---------------RGDGWDNDLASYCGKIVECSW--DK-EKKV-.-WVSLRIRVDKSKPNGIGTGRSVIKCIEDDLTKEVLLK
DSQ  ------GAAACACTTGATTTTCTGTTTGATATGGACAAGTAT------------GGACGTCAAATGCTC------TTCTTGCAAGAACGTGGGAGGATGAAGCTTATGGAA---------------------------------GGCTTTGCCGTTGAGTTT---------------------------------------------AGAGGTGATGGTTGGGACAATGACCTGGCTAGTTACTGTGGAAAGATTGTGGAGTGTTCATGG------GATAAG---GAGAAGAAAGTA---...---TGGGTTAGTTTGCGGATTAGAGTTGATAAATCGAAACCGAATGGTATCGGGACCGGTCGTAGCGTGATAAAGTGCATAGAAGATGACTTAACGAAAGAGGTTTTGCTGAAG
TRN  10010101100011000
NAM  Q9LFA7_ARATH/484-582
ASQ  EMNSVDFLYEMGEEE---GRGFL--FLHERGKKKLME-----------GYSVEF------------------RDDSDPSSYNGKIVECAW--DK-DKKV-.-WFSMRIRVDKTTPNDINTARKVIKSINDNITEEVLLQ
DSQ  GAAATGAACTCAGTAGACTTTCTGTATGAGATGGGTGAGGAAGAG---------GGGCGTGGTTTCCTC------TTCTTGCATGAAAGAGGGAAGAAAAAGCTTATGGAA---------------------------------GGATATTCAGTTGAGTTT------------------------------------------------------AGAGATGATTCGGACCCGTCAAGTTACAATGGGAAGATTGTAGAATGTGCTTGG------GATAAG---GATAAGAAAGTT---...---TGGTTTAGCATGAGGATCAGAGTTGACAAAACTACACCAAATGATATCAACACTGCTCGTAAGGTGATAAAGAGCATAAATGATAACATCACTGAGGAGGTTTTGCTTCAG
TRN  10010101100011001
NAM  Q9SS77_ARATH/539-646
ASQ  EMNSVDFLYEQDES----GRGML--SLFERGKKKHMD------------------GNSVVFRELQATNAETATDDSDPAEYSGKIVECSW--DQ-DEKV-.-WVSMRVRVDKSTPNDINTFRKVSTIIPLYI-LELLHY
DSQ  GAGATGAACTCGGTTGACTTTCTATACGAGCAGGATGAGAGT------------GGCCGTGGAATGCTC------TCCTTGTTTGAAAGAGGGAAGAAAAAGCATATGGAT------------------------------------------------------GGAAATTCTGTTGTTTTTAGAGAACTACAAGCTACTAATGCTGAAACTGCAACAGATGATTCAGACCCTGCTGAGTACTCTGGGAAGATTGTAGAGTGTTCTTGG------GATCAG---GATGAGAAAGTC---...---TGGGTAAGCATGCGGGTCAGGGTCGATAAATCAACGCCAAATGATATCAACACTTTCAGAAAGGTCAGTACCATAATCCCTCTTTATATA---CTTGAGTTGTTGCATTAT
TRN  10010101110011001
NAM  Q9AVW1_GUITH/229-328
ASQ  NLNTVDMKLNYCYTK------------TSKNLINYL------------------LCKINKSNNMRIFKIKKKSFANIENNLNESIYEFIF---DKQYVQ-.-WVYYKIRKDKFEPNSFRTLLDTLYTISSNVG---LFE
DSQ  AATCTCAATACTGTTGATATGAAATTAAATTATTGTTATACTAAA------------------------------------ACTTCTAAAAACTTGATAAATTATCTT------------------------------------------------------CTTTGTAAAATAAATAAATCAAATAATATGAGAATTTTTAAAATAAAGAAAAAGAGTTTTGCTAATATTGAAAATAATTTAAACGAATCTATTTATGAGTTTATTTTT---------GACAAACAATATGTTCAA---...---TGGGTGTACTATAAAATTAGAAAAGATAAATTTGAACCGAACTCTTTTAGAACTCTATTGGACACTTTATATACAATTTCTTCGAATGTGGGA---------TTGTTTGAA
TRN  10010101110011000
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