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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF03731 - Ku_N)
FAM  PF03731
PID  Ku_N
DES  Ku70/Ku80 N-terminal alpha/beta domain
IPR  IPR005161
ANO  17
ALN  286
AID  0.190231
APH  (((((((((KU70_RHIAP/28-242:0.69932,(((KU70_HUMAN/36-255:0.08459,(Q9W626_XENLA/36-254:0.26988,KU70_CHICK/58-278:0.13000):0.10217):0.42802,Q9FQ08_ARATH/30-267:1.14397):0.15698,O94395_SCHPO/19-236:1.11248):0.10993):0.23325,Q9U2D2_CAEEL/20-243:1.46472):0.15238,(KU70_YEAST/31-267:1.70062,KU70_DROME/33-256:1.36005):0.20262):0.14341,KU80_YEAST/5-232:1.82595):0.27088,Q9LNF5_ARATH/3-229:1.47379):0.31706,(Q9I7M8_DROME/7-213:1.48131,Q9HGM8_SCHPO/6-211:1.04878):0.24609):0.12651,Q21829_CAEEL/10-219:2.02438):0.67286,Q9W627_XENLA/8-243:0.15653):0.24027,KU86_MOUSE/9-244:0.14649,KU86_HUMAN/8-243:0.15660);
ATP  (((((((((KU70_RHIAP/28-242,(((KU70_HUMAN/36-255,(Q9W626_XENLA/36-254,KU70_CHICK/58-278)),Q9FQ08_ARATH/30-267),O94395_SCHPO/19-236)),Q9U2D2_CAEEL/20-243),(KU70_YEAST/31-267,KU70_DROME/33-256)),KU80_YEAST/5-232),Q9LNF5_ARATH/3-229),(Q9I7M8_DROME/7-213,Q9HGM8_SCHPO/6-211)),Q21829_CAEEL/10-219),Q9W627_XENLA/8-243),KU86_MOUSE/9-244,KU86_HUMAN/8-243);
ATL  19.5278
DNO  17
DLN  858
DID  0.367156
DPH  ((((Q21829_CAEEL/10-219:1.01536,Q9I7M8_DROME/7-213:0.77110):0.13364,((Q9LNF5_ARATH/3-229:0.65607,(((((Q9FQ08_ARATH/30-267:0.68994,O94395_SCHPO/19-236:0.62102):0.14010,((Q9W626_XENLA/36-254:0.22269,(KU70_HUMAN/36-255:0.19643,KU70_CHICK/58-278:0.13742):0.07611):0.27451,KU70_RHIAP/28-242:0.52572):0.13105):0.11493,(KU70_DROME/33-256:0.69777,Q9U2D2_CAEEL/20-243:0.73169):0.16384):0.07827,KU70_YEAST/31-267:0.93448):0.05019,KU80_YEAST/5-232:1.15680):0.13703):0.15838,Q9HGM8_SCHPO/6-211:0.72416):0.08761):0.34786,Q9W627_XENLA/8-243:0.18288):0.21177,KU86_MOUSE/9-244:0.11750,KU86_HUMAN/8-243:0.11501);
DTP  ((((Q21829_CAEEL/10-219,Q9I7M8_DROME/7-213),((Q9LNF5_ARATH/3-229,(((((Q9FQ08_ARATH/30-267,O94395_SCHPO/19-236),((Q9W626_XENLA/36-254,(KU70_HUMAN/36-255,KU70_CHICK/58-278)),KU70_RHIAP/28-242)),(KU70_DROME/33-256,Q9U2D2_CAEEL/20-243)),KU70_YEAST/31-267),KU80_YEAST/5-232)),Q9HGM8_SCHPO/6-211)),Q9W627_XENLA/8-243),KU86_MOUSE/9-244,KU86_HUMAN/8-243);
DTL  11.7485
RID  0.190231
RPH  (((((((((KU70_RHIAP/28-242:0.69932,(((KU70_HUMAN/36-255:0.08459,(Q9W626_XENLA/36-254:0.26988,KU70_CHICK/58-278:0.13000):0.10217):0.42802,Q9FQ08_ARATH/30-267:1.14397):0.15698,O94395_SCHPO/19-236:1.11248):0.10993):0.23325,Q9U2D2_CAEEL/20-243:1.46472):0.15238,(KU70_YEAST/31-267:1.70062,KU70_DROME/33-256:1.36005):0.20262):0.14341,KU80_YEAST/5-232:1.82595):0.27088,Q9LNF5_ARATH/3-229:1.47379):0.31706,(Q9I7M8_DROME/7-213:1.48131,Q9HGM8_SCHPO/6-211:1.04878):0.24609):0.12651,Q21829_CAEEL/10-219:2.02438):0.67286,Q9W627_XENLA/8-243:0.15653):0.24027,KU86_MOUSE/9-244:0.14649,KU86_HUMAN/8-243:0.15660);
RTP  (((((((((KU70_RHIAP/28-242,(((KU70_HUMAN/36-255,(Q9W626_XENLA/36-254,KU70_CHICK/58-278)),Q9FQ08_ARATH/30-267),O94395_SCHPO/19-236)),Q9U2D2_CAEEL/20-243),(KU70_YEAST/31-267,KU70_DROME/33-256)),KU80_YEAST/5-232),Q9LNF5_ARATH/3-229),(Q9I7M8_DROME/7-213,Q9HGM8_SCHPO/6-211)),Q21829_CAEEL/10-219),Q9W627_XENLA/8-243),KU86_MOUSE/9-244,KU86_HUMAN/8-243);
RTL  19.5278
LNK  KU70_CHICK/58-278:O93257:AB016529
LNK  KU70_DROME/33-256:Q23976:U15004
LNK  KU70_HUMAN/36-255:P12956:J04611
LNK  KU70_RHIAP/28-242:Q26228:L41356
LNK  KU70_YEAST/31-267:P32807:D15052
LNK  KU80_YEAST/5-232:Q04437:Z49702
LNK  KU86_HUMAN/8-243:P13010:J04977
LNK  KU86_MOUSE/9-244:P27641:X66323
LNK  O94395_SCHPO/19-236:O94395:AL034490
LNK  Q21829_CAEEL/10-219:Q21829:Z32683
LNK  Q9FQ08_ARATH/30-267:Q9FQ08:AF283759
LNK  Q9HGM8_SCHPO/6-211:Q9HGM8:AL391604
LNK  Q9I7M8_DROME/7-213:Q9I7M8:AE003648
LNK  Q9LNF5_ARATH/3-229:Q9LNF5:AC023673
LNK  Q9U2D2_CAEEL/20-243:Q9U2D2:AL117202
LNK  Q9W626_XENLA/36-254:Q9W626:AB020608
LNK  Q9W627_XENLA/8-243:Q9W627:AB020609
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9I7M8_DROME/7-213
ASQ  CLIIVLDVRTCAAEEVKLKSA------------KCVAEILKDKIVCDRK-DYVSFVLVGCDTDEIKTE-.DASHPNVLP.........FG-----EPRLCSWQLLLEFFQFVNK------------TACEDGEWLNGLQAALE----LQNVATTLRVARRRILLLFDFNDFPQ------DYEKFNEITDELL---------------GENIELIVGTHNIAYI----DNAITSQPQAIFNFSRKCGPDELNNQKYALS---------LVPRCNATLCSFKEALHTV
DSQ  TGCCTTATAATTGTACTGGATGTGCGAACATGTGCCGCCGAAGAAGTGAAGCTGAAGTCCGCA------------------------------------AAATGTGTGGCGGAGATTCTTAAGGACAAGATCGTGTGCGATAGGAAG---GACTACGTGTCCTTCGTCCTCGTGGGTTGCGACACCGATGAAATAAAAACTGAG---...GATGCTTCCCACCCAAATGTGCTGCCC...........................TTTGGT---------------GAACCAAGACTTTGCAGCTGGCAGCTCTTGCTGGAATTCTTCCAGTTTGTGAATAAG------------------------------------ACAGCCTGCGAGGATGGAGAATGGCTAAATGGTCTACAGGCGGCCCTGGAG------------CTTCAGAATGTCGCAACTACCTTGAGAGTCGCCAGGCGGAGGATCCTCCTGCTCTTCGATTTCAACGACTTTCCACAG------------------GACTACGAGAAGTTCAACGAAATCACGGACGAATTACTT---------------------------------------------GGCGAAAACATCGAGTTAATTGTGGGAACTCACAACATAGCCTACATA------------GACAATGCCATCACTTCTCAGCCTCAGGCTATTTTCAACTTTTCGCGCAAATGCGGCCCCGATGAGCTGAATAACCAGAAGTACGCCCTCAGT---------------------------CTCGTTCCTCGCTGCAATGCGACGTTGTGCAGCTTCAAGGAGGCACTGCATACCGTC
TRN  10010101100011010
NAM  Q9HGM8_SCHPO/6-211
ASQ  CTVFVLDLGKDMGTCHHGRSH-----SDLEWTLSYFHDELSHKFLANRKTDVVGIVGYKCDDTKNDLAE.QEAYWNISV.........LY-----PIQTALFSKLQSVSQTLKP------------SNTMQGDLISAIVVSFDL---MARH-CKKNKWKKKMIVLTAARGII-------DFSDYIGIAEQLLQHDVFLGVY------GVDFDQEDIN---------------------YSEPLKESQKKENEVRIQE----------FVESCHGQYCTFQQIYNNI
DSQ  TGTACTGTTTTTGTACTTGACTTGGGCAAAGATATGGGGACCTGTCACCATGGCAGGTCTCAT---------------TCTGATCTCGAATGGACTTTGTCGTATTTTCACGACGAATTGTCTCATAAGTTTTTAGCAAATAGGAAGACAGACGTAGTTGGAATCGTTGGTTACAAATGCGATGATACGAAAAATGATTTAGCTGAG...CAGGAAGCCTATTGGAATATCAGTGTT...........................TTGTAT---------------CCTATACAAACTGCCTTATTTTCAAAGCTACAATCCGTTTCTCAAACGTTAAAACCA------------------------------------AGCAATACTATGCAAGGCGATCTGATATCTGCAATAGTTGTGTCCTTTGATTTG---------ATGGCTCGGCAT---TGTAAAAAGAACAAATGGAAGAAGAAGATGATAGTGCTTACGGCAGCTAGGGGGATTATC---------------------GACTTTAGTGATTACATTGGAATTGCCGAACAACTACTGCAGCATGATGTTTTTCTAGGTGTTTAT------------------GGAGTTGATTTTGATCAAGAAGATATTAAT---------------------------------------------------------------TATTCTGAGCCTTTAAAGGAATCTCAGAAAAAGGAAAACGAAGTTCGAATTCAAGAG------------------------------TTTGTTGAGAGTTGTCATGGTCAGTACTGCACATTTCAACAGATTTATAACAACATC
TRN  10010101100011000
NAM  Q9W627_XENLA/8-243
ASQ  AVVLCMDVGLAMSHSNQGKES------PFEQAKKVMMLFLQRQVFAESK-DEIAVVLYGTDTTDNALAR.EDQYENISV.........HR-----HLMLPDFDLLEQIENVVEP-------------GSVQADFLDALIVSMDL---LQKETLGKKYTRLHIAVFSDLSSPF-------SVNQLEVIIANLKKAEITLQFFLPFSVDEEEFGGSSNNRGNAGS-----SDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSLERLSIFKKIERRP
DSQ  GCCGTGGTGCTGTGTATGGACGTGGGACTCGCAATGAGCCATTCCAACCAAGGCAAGGAGTCT------------------CCGTTTGAGCAAGCCAAGAAGGTTATGATGCTCTTCCTGCAGAGACAGGTGTTTGCAGAAAGCAAG---GATGAGATTGCAGTGGTTCTGTATGGCACGGACACCACAGATAATGCCCTGGCTCGT...GAAGATCAGTATGAGAACATCTCTGTC...........................CATCGC---------------CACCTGATGCTTCCAGACTTTGACCTTCTAGAACAAATAGAGAATGTAGTTGAGCCA---------------------------------------GGCTCCGTGCAAGCTGATTTTCTTGATGCTCTGATTGTATCAATGGATCTT---------CTGCAGAAGGAGACGCTGGGAAAGAAGTACACGCGACTGCACATTGCAGTATTCTCTGATCTCAGCAGCCCCTTC---------------------AGTGTGAACCAACTTGAGGTTATTATCGCGAACCTTAAAAAAGCTGAAATCACCCTTCAGTTCTTTCTGCCTTTCTCTGTTGATGAAGAAGAGTTTGGAGGTTCCAGTAATAACAGAGGGAATGCAGGCAGT---------------TCGGACAGAGGGTGTGGCCCTGGGAAAGGGCTCTCTGATCAACAGAAAGAAGGCATTGAGATGGTGAGGAAGATCATGTTCTCTCTGGACGGGGAAGAAGGACTAAGTGAAGTTTTTACATTTAGGGATAGTCTAGAGAGGCTGAGCATTTTCAAGAAGATCGAGAGGAGGCCT
TRN  10010101100011001
NAM  KU86_HUMAN/8-243
ASQ  AVVLCMDVGFTMSNSIPGIES------PFEQAKKVITMFVQRQVFAENK-DEIALVLFGTDGTDNPLSG.GDQYQNITV.........HR-----HLMLPDFDLLEDIESKIQP-------------GSQQADFLDALIVSMDV---IQHETIGKKFEKRHIEIFTDLSSRF-------SKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGPFRLG-----GHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFSESLRKLCVFKKIERHS
DSQ  GCTGTTGTGCTGTGTATGGACGTGGGCTTTACCATGAGTAACTCCATTCCTGGTATAGAATCC------------------CCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAGGTGTTTGCTGAGAACAAG---GATGAGATTGCTTTAGTCCTGTTTGGTACAGATGGCACTGACAATCCCCTTTCTGGT...GGGGATCAGTATCAGAACATCACAGTG...........................CACAGA---------------CATCTGATGCTACCAGATTTTGATTTGCTGGAGGACATTGAAAGCAAAATCCAACCA---------------------------------------GGTTCTCAACAGGCTGACTTCCTGGATGCACTAATCGTGAGCATGGATGTG---------ATTCAACATGAAACAATAGGAAAGAAGTTTGAGAAGAGGCATATTGAAATATTCACTGACCTCAGCAGCCGATTC---------------------AGCAAAAGTCAGCTGGATATTATAATTCATAGCTTGAAGAAATGTGACATCTCCCTGCAATTCTTCTTGCCTTTCTCACTTGGCAAGGAAGATGGAAGTGGGGACAGAGGAGATGGCCCCTTTCGCTTAGGT---------------GGCCATGGGCCTTCCTTTCCACTAAAAGGAATTACCGAACAGCAAAAAGAAGGTCTTGAGATAGTGAAAATGGTGATGATATCTTTAGAAGGTGAAGATGGGTTGGATGAAATTTATTCATTCAGTGAGAGTCTGAGAAAACTGTGCGTCTTCAAGAAAATTGAGAGGCATTCC
TRN  10010101100011000
NAM  KU86_MOUSE/9-244
ASQ  AVVLCVDVGVAMGNSIPGEES------PIEQAKKVMTMFVQRQVFSESK-DEIALALYGTDGTDMPLSG.KDQYQNITV.........CR-----HLMLPDFDLLEDIGNKIQP-------------SSQQADFLDALIVCMDL---IQRETIGKKFGKKHIEVFTDLRSPF-------SKDQLDVIICNLKKCGISLQFFLPFPIDKNGEPGERGDLDSGLD-----HLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCVFKKIERRS
DSQ  GCTGTTGTGCTGTGTGTGGATGTGGGGGTTGCCATGGGTAACTCCATTCCTGGTGAAGAATCT------------------CCAATTGAACAAGCAAAGAAAGTGATGACTATGTTTGTCCAACGACAGGTATTTTCGGAGAGCAAA---GATGAGATTGCGTTAGCTCTCTATGGCACAGATGGCACTGATATGCCCCTTTCTGGC...AAGGACCAGTATCAGAACATCACAGTG...........................TGCAGA---------------CACCTGATGCTACCAGATTTTGATTTGCTGGAAGACATCGGAAACAAAATCCAGCCA---------------------------------------AGTTCCCAGCAAGCCGACTTCCTGGACGCCCTGATTGTGTGCATGGATTTG---------ATTCAGCGTGAAACCATAGGGAAGAAGTTTGGGAAGAAGCATATTGAAGTGTTCACTGACCTCCGCAGCCCGTTC---------------------AGCAAGGACCAACTGGACGTTATAATTTGTAACTTGAAGAAGTGTGGCATCTCTCTGCAGTTCTTTTTGCCTTTTCCAATCGACAAGAATGGCGAGCCTGGCGAGAGAGGGGACCTGGACTCTGGCTTGGAC---------------CACCTCAAACCCTCCTTTCCTCAAAAAGGACTTACTGAGCAGCAAAAGGAAGGCATCCGCATGGTGACAAGGGTGATGCTGTCCTTAGAAGGCGAAGACGGGCTGGATGAAATTTATTCCTTTAGTGAGAGTCTACGACAACTGTGCGTCTTTAAGAAGATTGAGAGGCGTTCC
TRN  10010101100011010
NAM  Q9LNF5_ARATH/3-229
ASQ  SVLPDVEKACSMLLQKKVYDLFLLKLLFMNFGSFLIGFGLLLQLIYNKY-DEVGIVVFGTEETGNELAReIGGYENVTV.........LR--NIRVVDELAAEHVKQLPRGTVA------------GDCILLAILDALIVGMDM---LIKMYGNAHKGKKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIE--------------------------------ENDHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAP
DSQ  AGTGTTCTCCCTGATGTTGAAAAGGCATGTTCAATGCTACTTCAGAAGAAGGTATACGATCTTTTTCTTCTGAAATTATTGTTCATGAATTTTGGATCTTTCCTTATTGGTTTTGGTTTGTTGTTGCAGTTGATTTACAACAAGTAT---GATGAAGTTGGAATTGTTGTCTTTGGAACTGAAGAAACTGGAAACGAGCTTGCTAGGgagATAGGTGGATATGAGAATGTTACAGTT...........................TTAAGG------AATATCAGAGTTGTTGATGAATTAGCGGCAGAGCATGTGAAGCAGCTTCCTCGAGGAACTGTAGCT------------------------------------GGAGACTGTATCCTGCTAGCTATTCTTGATGCTTTAATTGTTGGGATGGATATG---------CTTATAAAGATGTATGGTAATGCACACAAGGGGAAAAAACGGATGTGTCTCATCACGAACGCAGCTTGTCCTACCAAAGATCCATTTGAAGGGACGAAAGATGATCAAGTCAGCACTATTGCTATGAAAATGGCTGCGGAGGGAATTAAGATGGAGAGCATTGTTATGAGGTCTAATTTAAGTGGTGATGCTCATGAGAGAGTAATAGAG------------------------------------------------------------------------------------------------GAGAATGATCATCTGTTGACTTTATTCTCCAGCAACGCGATTGCCAAAACAGTGAATGTTGATAGTCCACTCTCACTGCTTGGTTCCTTAAAGACCCGGAGGGTGGCTCCA
TRN  10010101100011000
NAM  KU70_DROME/33-256
ASQ  AILFVVDANLQTAGVERLLEA-----------LNIIRTAFISGLLVNDK-DLIGLIFANTKHSPPPLE-.ASALDNIVMpdncavflpLR-----QLTKPIVEHYLEFMGGVET---QFADVYGLAEPDGRGRFDLMIRLCIEM---LEK--CGKKLNNAKIAYVTDVREPHPS-----NSNHFQAALQK-----------------ASDLEGKEFEFHVIPM------VDDFDYEPFYKEFITLSRAIELDAFQVPDAQ-------MLREILSDRKLKQDFLRRC
DSQ  GCCATTCTGTTCGTGGTAGACGCCAATCTTCAGACAGCCGGCGTGGAGCGCCTGTTGGAGGCA---------------------------------CTGAACATCATCCGGACGGCCTTTATATCCGGACTTCTGGTTAACGACAAG---GACCTCATCGGACTCATCTTCGCCAACACCAAGCACAGTCCGCCGCCGCTGGAA---...GCCAGTGCATTGGACAACATCGTAATGccggataactgcgcagtgttcttgcccCTTCGC---------------CAACTAACCAAACCCATTGTGGAGCACTATCTGGAATTCATGGGCGGGGTGGAGACG---------CAGTTCGCCGATGTGTATGGCCTGGCGGAACCCGATGGTCGCGGCAGGTTTGACCTTATGATCCGGCTCTGCATCGAGATG---------CTGGAAAAG------TGCGGCAAGAAGCTAAACAACGCCAAGATCGCCTATGTCACGGACGTCAGGGAACCTCATCCATCG---------------AACAGCAATCACTTCCAGGCTGCCCTGCAAAAG---------------------------------------------------GCCAGCGATCTGGAGGGCAAGGAGTTCGAGTTTCATGTCATTCCCATG------------------GTCGATGACTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGCTATCGAACTGGACGCCTTCCAGGTGCCAGATGCCCAG---------------------ATGCTGCGCGAAATCCTGTCCGATCGTAAGTTGAAGCAGGATTTCCTTCGCCGATGC
TRN  10010101100011001
NAM  O94395_SCHPO/19-236
ASQ  AILFVIEVSPSMLDPVDEFTP-----SSLQMALICAYQLAAQRVITNPS-DIMGVLLYGTESS------.TGRFANQMM.........LL-----DIDPPDAERIKSLQSFEKD---FQFSKEKFKPCSCQVSLSSVLYHCSVI---FT---TKAENFEKRLFLITDNDHPAW------DATERDIILQR-----------------AKDLRDLDIQVHPVFL---DPPTHSFRINIFYSDFLYIVYGRQDVSNLVNRGQA------QLQHMLNMITALQKPKRAH
DSQ  GCCATTTTATTTGTGATTGAAGTTTCTCCCAGTATGCTTGATCCTGTCGATGAATTTACTCCC---------------AGCTCTTTGCAGATGGCACTTATTTGTGCGTACCAGCTGGCGGCTCAAAGAGTAATCACAAATCCCAGC---GACATAATGGGTGTATTGCTCTATGGTACTGAGTCCTCT------------------...ACGGGCCGATTCGCAAATCAAATGATG...........................CTTTTA---------------GACATTGATCCTCCTGATGCTGAACGTATTAAAAGCTTACAAAGCTTTGAAAAAGAT---------TTCCAATTCTCAAAAGAAAAATTCAAACCATGCTCTTGTCAAGTTTCTCTGTCTAGTGTACTTTATCATTGCAGTGTTATA---------TTTACT---------ACTAAAGCTGAAAATTTTGAAAAACGCTTATTTTTAATTACAGATAATGACCATCCTGCTTGG------------------GATGCAACTGAACGCGATATTATTTTGCAGCGT---------------------------------------------------GCTAAAGATTTAAGGGACTTGGATATTCAAGTTCATCCAGTATTTTTG---------GATCCGCCTACACATTCCTTTAGAATAAACATATTTTATTCTGACTTTTTATATATCGTTTATGGTAGGCAAGATGTGTCTAATCTAGTCAACAGGGGTCAAGCT------------------CAGCTGCAACATATGCTCAATATGATTACAGCTTTACAAAAACCGAAAAGAGCTCAT
TRN  10010101100011000
NAM  KU70_RHIAP/28-242
ASQ  GILFLIDATEGMFEEVDGDTA-------FMQCIKAAKSTMLNKITSSPK-DLVGIILFGTDKDNN----.PNRFKNVYV.........LQ-----DLESPGAESVLKLEKLIAD----GPKKFKQEYGHGNVNMADVLWTCALM---F----SKSRAGQRRVLVLTNQDDPHKG-----SGDLDDKAVVK-----------------AKDLLQSGIELDLVHL--KPPGDKKFRPQILYKNLVTDKENYEDGFPEASD---------KMEELLLRVRMKDHKKRRL
DSQ  GGCATCCTGTTTCTTATCGATGCCACGGAAGGCATGTTTGAAGAAGTCGACGGTGACACTGCT---------------------TTCATGCAGTGCATTAAGGCTGCGAAGTCCACAATGCTGAACAAGATCACAAGCAGTCCAAAA---GACCTCGTGGGTATAATACTTTTTGGCACGGACAAAGACAACAAC------------...CCCAATCGCTTCAAGAACGTGTATGTG...........................CTGCAA---------------GATCTCGAAAGTCCAGGAGCAGAAAGTGTTCTCAAGCTAGAGAAGCTGATTGCTGAT------------GGTCCCAAGAAGTTCAAGCAAGAGTATGGGCATGGCAATGTCAACATGGCCGATGTCTTGTGGACTTGCGCCCTTATG---------TTC------------TCCAAGTCCCGTGCAGGGCAGCGGCGAGTGCTGGTGCTGACCAATCAGGATGATCCTCACAAGGGC---------------TCGGGCGATCTCGACGACAAGGCGGTGGTCAAG---------------------------------------------------GCTAAGGATCTTTTACAATCTGGCATTGAACTCGACCTGGTTCACTTG------AAGCCGCCTGGAGACAAGAAGTTCCGACCACAGATCCTCTACAAGAACCTGGTGACTGACAAAGAGAACTACGAGGACGGTTTCCCCGAAGCTTCCGAC---------------------------AAAATGGAGGAACTTTTATTGAGGGTACGGATGAAGGACCACAAGAAGCGGCGTCTC
TRN  10010101100011010
NAM  KU70_CHICK/58-278
ASQ  SLIFLVDASKAMFEPYENEEA----ATPFDMTMQCIRNVYTSKIISSDK-DLLSVVFYGMENNKN----.SADFKHIYV.........LQ-----ELDNPGAKRILELDQYRGD--EGRVLFRETFGHNADYSLGEALWACSNL---FSD--VRVRLSHKRIMLFTNEDNPHAN-----DSAKAKLARTR-----------------AGDLRDTGIILDLMHL----KKPGGFDISLFYRDIINVAEDEDLGIQPDESG--------KLEHLMKKVRAKETRKRAL
DSQ  AGCTTGATTTTCTTGGTCGACGCCTCCAAGGCCATGTTCGAGCCCTACGAGAATGAGGAGGCG------------GCCACTCCCTTTGACATGACCATGCAGTGCATCCGGAATGTGTACACCAGCAAAATTATTAGTAGTGACAAG---GATCTGTTAAGTGTTGTGTTCTACGGCATGGAGAACAACAAGAAC------------...TCCGCAGACTTCAAGCATATCTATGTC...........................CTTCAG---------------GAGCTGGACAATCCAGGTGCAAAGCGTATTCTGGAGCTGGACCAGTACAGGGGAGAT------GAAGGACGAGTACTGTTCCGTGAGACCTTTGGCCACAATGCTGACTATTCACTGGGTGAAGCACTCTGGGCCTGCTCTAATCTC---------TTCAGCGAT------GTCCGAGTTAGACTAAGCCACAAAAGGATCATGCTTTTCACCAACGAGGATAACCCTCATGCCAAT---------------GATAGTGCTAAGGCCAAGCTGGCCAGGACCAGA---------------------------------------------------GCTGGTGACCTGAGAGACACAGGTATTATCCTGGACTTGATGCACTTG------------AAGAAGCCGGGAGGGTTCGATATCTCTTTGTTCTACAGGGACATCATCAACGTAGCAGAGGATGAGGACCTTGGGATCCAGCCTGATGAGTCAGGG------------------------AAACTGGAGCATCTCATGAAGAAAGTACGAGCAAAGGAGACAAGGAAACGGGCTTTA
TRN  10010101100011000
NAM  KU70_HUMAN/36-255
ASQ  SLIFLVDASKAMFESQSEDEL-----TPFDMSIQCIQSVYISKIISSDR-DLLAVVFYGTEKDKN----.SVNFKNIYV.........LQ-----ELDNPGAKRILELDQFKGQ--QGQKRFQDMMGHGSDYSLSEVLWVCANL---FSD--VQFKMSHKRIMLFTNEDNPHGN-----DSAKASRARTK-----------------AGDLRDTGIFLDLMHL----KKPGGFDISLFYRDIISIAEDEDLRVHFEESS--------KLEDLLRKVRAKETRKRAL
DSQ  AGTTTGATTTTTTTGGTTGATGCCTCCAAGGCTATGTTTGAATCTCAGAGTGAAGATGAGTTG---------------ACACCTTTTGACATGAGCATCCAGTGTATCCAAAGTGTGTACATCAGTAAGATCATAAGCAGTGATCGA---GATCTCTTGGCTGTGGTGTTCTATGGCACCGAGAAAGACAAAAAT------------...TCAGTGAATTTTAAAAATATTTACGTC...........................TTACAG---------------GAGCTGGATAATCCAGGTGCAAAACGAATTCTAGAGCTTGACCAGTTTAAGGGGCAG------CAGGGACAAAAACGTTTCCAAGACATGATGGGCCACGGATCTGACTACTCACTCAGTGAAGTGCTGTGGGTCTGTGCCAACCTC---------TTTAGTGAT------GTCCAATTCAAGATGAGTCATAAGAGGATCATGCTGTTCACCAATGAAGACAACCCCCATGGCAAT---------------GACAGTGCCAAAGCCAGCCGGGCCAGGACCAAA---------------------------------------------------GCCGGTGATCTCCGAGATACAGGCATCTTCCTTGACTTGATGCACCTG------------AAGAAACCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCATCAGCATAGCAGAGGATGAGGACCTCAGGGTTCACTTTGAGGAATCCAGC------------------------AAGCTAGAAGACCTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAGCACTC
TRN  10010101100011000
NAM  Q9W626_XENLA/36-254
ASQ  SLIFLVDASKPMFESIDGELT------PFDLTLQCIRSVYASKIISSDH-DLLSVVFFGTRESTN----.CDPFKHLCV.........LH-----DLDTPGAKRILDLDKYKEE--KGRALFCDTIGCGGDFSLGEALWLCSNL---FSN--VKVKMSHKRIILFTNEDNPHAN-----DPAKAKQARAK-----------------AEDLKDMGIFLDLMHL----EKPGGFDISLFYRDIVNTAEDEDLVVQFKASE--------KLDDLLKKVRAKEARKRAL
DSQ  AGTCTAATCTTCCTTGTTGATGCCTCCAAGCCGATGTTTGAGAGTATCGATGGTGAATTGACT------------------CCATTTGACCTTACTTTGCAGTGCATTCGCAGTGTCTACGCCAGCAAGATCATTAGCAGTGACCAT---GACCTCCTGTCTGTAGTGTTCTTTGGCACTCGTGAGAGCACTAAC------------...TGTGATCCATTCAAACACCTCTGTGTC...........................CTTCAT---------------GATTTGGATACCCCAGGTGCTAAGCGCATCCTTGATCTGGATAAGTACAAAGAGGAA------AAGGGAAGAGCATTATTCTGTGACACTATTGGGTGTGGTGGAGACTTTTCTTTGGGGGAGGCTCTTTGGCTTTGCTCAAATCTC---------TTTAGCAAT------GTAAAAGTCAAAATGAGCCACAAGCGCATAATACTGTTTACTAATGAAGACAACCCTCATGCAAAT---------------GACCCAGCCAAAGCGAAACAGGCAAGAGCCAAG---------------------------------------------------GCAGAGGACCTTAAGGACATGGGGATATTTTTGGACCTAATGCACCTT------------GAGAAACCTGGAGGATTTGACATCTCTTTGTTTTATCGTGACATTGTTAACACTGCTGAGGATGAGGATCTTGTGGTGCAATTTAAGGCTTCTGAA------------------------AAACTGGATGATCTCTTAAAGAAGGTACGGGCCAAGGAAGCAAGGAAGAGGGCCCTG
TRN  10010101100011000
NAM  Q9FQ08_ARATH/30-267
ASQ  FVVYLIDASPKMFCSTCPSEEEDKQESHFHIAVSCIAQSLKAHIINRSN-DEIAICFFNTREKKN----.LQDLNGVYV.........FNVPERDSIDRPTARLIKEFDLIEESFDKEIGSQTGIVSDSRENSLYSALWVAQAL---LRK--GSLKTADKRMFLFTNEDDPFGSMRISVKEDMTRTTLQR-----------------AKDAQDLGISIELLPL---SQPDKQFNITLFYKDLIGLNSDELTEFMPSVGQ--------KLEDMKDQLKKRVLAKRIA
DSQ  TTTGTAGTCTATCTAATTGATGCTTCTCCCAAAATGTTCTGCTCTACTTGCCCCTCTGAGGAAGAGGACAAACAAGAAAGTCATTTTCACATTGCTGTTAGTTGCATTGCTCAGTCACTCAAGGCTCATATTATCAATCGGTCAAAT---GATGAAATAGCTATATGTTTCTTTAACACTCGTGAAAAGAAGAAT------------...CTTCAGGATCTAAATGGTGTTTATGTC...........................TTTAATGTTCCAGAGAGGGATAGTATTGACCGTCCAACAGCGAGGCTGATTAAAGAATTCGATCTCATAGAAGAATCATTTGATAAGGAAATTGGCAGTCAAACTGGTATTGTCTCAGATTCTCGGGAGAATTCCCTTTATAGTGCTCTCTGGGTTGCACAAGCACTA---------CTGCGCAAA------GGATCTTTAAAGACAGCAGATAAACGCATGTTTCTATTCACTAATGAAGATGATCCTTTTGGGAGTATGAGGATCTCTGTTAAAGAGGATATGACGAGGACGACGTTGCAGAGA---------------------------------------------------GCTAAGGATGCACAAGACCTTGGCATCTCAATCGAGCTTCTACCACTC---------AGTCAACCTGATAAGCAATTCAATATAACTCTCTTCTACAAGGATCTAATTGGATTAAACAGTGATGAACTTACGGAGTTCATGCCATCAGTTGGACAG------------------------AAATTAGAGGACATGAAGGACCAACTGAAGAAGCGTGTACTTGCCAAGAGAATAGCA
TRN  10010101100011000
NAM  Q9U2D2_CAEEL/20-243
ASQ  YTFFIIDGNPAMFETSKAGEP-----PEFKLALKLILDEIVRVCCSRSLNNHIGVIVTSTKNSE-----.TEGLENSTL.........LV-----PMGVLGQEEVNKIKEIAEE-ENLLSAVNNYGGDHHKSDLSNVLNYCKRV---FA---SCSNTRHQSVIYLTNNRNPFE------RDDFLESSHFKRTKAAVTKII-------GEGHRKTLGEFSVIML-----------PEDGYKPQDKDEKRKEPWYDLDTEVFS------TECDAAARIRQKITAQRSH
DSQ  TACACATTCTTCATAATTGACGGAAATCCGGCAATGTTCGAAACGTCGAAAGCCGGTGAGCCG---------------CCAGAGTTCAAGCTTGCTCTGAAGCTCATTCTCGACGAAATAGTCCGTGTTTGCTGCTCGCGGAGCCTTAACAATCATATCGGAGTGATTGTCACTAGTACTAAAAACTCGGAG---------------...ACCGAGGGACTCGAAAATAGCACTCTG...........................CTTGTG---------------CCGATGGGTGTTCTTGGACAGGAAGAAGTGAATAAGATTAAGGAAATTGCGGAGGAA---GAAAACCTCCTCTCGGCAGTGAACAATTACGGCGGTGATCATCACAAATCCGACTTGTCAAATGTGCTTAACTACTGTAAACGAGTG---------TTTGCA---------AGTTGTTCGAATACACGTCATCAATCGGTCATTTATTTGACAAACAATCGGAATCCATTTGAA------------------CGTGACGATTTTTTGGAATCTTCGCATTTTAAACGCACCAAAGCCGCGGTCACCAAAATTATC---------------------GGTGAGGGACATCGAAAGACGCTCGGTGAATTTTCGGTTATTATGTTG---------------------------------CCAGAGGATGGATATAAGCCACAGGATAAGGACGAGAAACGGAAGGAGCCATGGTACGACCTGGACACGGAAGTCTTCAGT------------------ACGGAATGCGACGCGGCCGCCCGTATTCGTCAAAAAATCACTGCTCAACGATCACAC
TRN  10010101100011001
NAM  KU70_YEAST/31-267
ASQ  GILFCIELSETMFKESSDLEY----KSPLLEILESLDELMSQLVITRPG-TAIGCYFYYCNREDA----.KEGIYELFP.........LR-----DINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFTFMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQE------AQDIDERARLRRL---------------TIDLFDNKVNFATFFI----GYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM
DSQ  GGAATTTTGTTTTGCATTGAACTATCAGAGACAATGTTTAAAGAGTCCTCTGATCTAGAGTAT------------AAATCACCATTGTTGGAAATTCTGGAATCACTAGATGAGCTAATGTCACAATTGGTCATAACAAGACCTGGG---ACAGCTATTGGTTGCTATTTTTATTACTGTAACAGAGAGGATGCC------------...AAGGAAGGTATCTATGAACTTTTTCCA...........................TTAAGG---------------GATATAAATGCTACATTTATGAAGAAATTGAACGATCTTTTAGAAGATTTATCATCGGGGAGAATAAGCCTATACGACTATTTTATGTTTCAACAAACTGGGAGTGAAAAGCAAGTGCGCTTATCTGTATTATTCACATTCATGCTTGACACTTTTTTGGAAGAGATTCCGGGTCAAAAGCAATTAAGCAACAAGAGAGTGTTCTTATTCACTGACATTGATAAACCACAAGAG------------------GCGCAAGATATCGATGAACGGGCAAGATTGAGAAGGCTT---------------------------------------------ACAATTGATTTATTTGATAACAAAGTGAATTTTGCAACTTTTTTTATT------------GGCTATGCCGATAAACCATTTGACAACGAGTTTTATTCGGACATACTGCAGTTGGGTTCACATACAAATGAGAATACTGGTTTGGATTCTGAATTTGATGGTCCAAGTACAAAGCCTATAGATGCTAAATACATCAAGTCCAGAATCCTAAGGAAAAAGGAGGTAAAGAGGATAATG
TRN  10010101100011000
NAM  Q21829_CAEEL/10-219
ASQ  ITVILIDAGSNMSVKDTETGK-----SAFENAINAADWIVSRKLFSKDP-ELFSVMAYNLDPKEYKTEVgGQTFNGVQC.........----QNEKFTPASFDHLKFITKELQQ-----------NTEMIDPNFFKGVLGAVAV---LKDQIESYPNPSGITLIVL-----------------------------------------TNGLNENIRQENFDLLVEAVSESNADLMIIGIDENPEYPASRVAELAETLEGRTYTFQ--NVAKMLSTFQARQKSERKY
DSQ  ATTACCGTAATCCTTATCGACGCAGGATCCAATATGTCTGTGAAAGACACTGAAACTGGAAAA---------------AGTGCATTTGAAAATGCGATCAATGCTGCAGATTGGATTGTTTCGAGAAAACTATTTTCCAAAGATCCC---GAGCTCTTCTCAGTGATGGCCTACAATTTGGATCCGAAAGAATACAAAACAGAAGTTggcGGTCAAACATTTAATGGAGTCCAGTGT...........................------------CAAAATGAAAAGTTTACACCAGCCAGCTTTGATCATTTAAAGTTTATCACAAAGGAATTGCAGCAA---------------------------------AATACAGAAATGATAGATCCAAATTTTTTCAAAGGTGTTCTGGGAGCCGTCGCAGTG---------CTAAAAGATCAAATCGAATCGTATCCGAATCCATCAGGAATCACGTTGATTGTACTG---------------------------------------------------------------------------------------------------------------------------ACAAATGGATTAAACGAGAACATTCGACAAGAAAATTTCGATCTTTTAGTTGAAGCCGTTAGTGAAAGTAATGCAGATTTGATGATAATTGGAATCGATGAAAATCCAGAATATCCTGCTTCTCGAGTTGCAGAATTGGCAGAAACATTAGAAGGAAGAACATATACTTTTCAA------AACGTCGCAAAGATGCTCTCCACCTTCCAGGCTCGTCAGAAATCCGAGAGAAAATAC
TRN  10010101100011000
NAM  KU80_YEAST/5-232
ASQ  STTFIVDVSPSMMKNNNVSKS-----------MAYLEYTLLNKSKKSRKTDWISCYLANCPVSEN----.SQEIPNVFQ.........IQSFLAPVTTTATIGFIKRLKQYCDQ----------HSHDSSNEGLQSMIQCLLVVSLDIKQQFQARKILKQIVVFTDNLDDLDI------TDEEIDLLTEELSTRIILIDC-------GKDTQEERKKSNWLKLVEAIPNSRIYNMNELLVEITSPATSVVKPVRVFS----------GELRLGADILSTQTSNPSG
DSQ  TCAACAACTTTCATCGTGGATGTTTCACCATCAATGATGAAAAATAATAATGTTTCCAAATCT---------------------------------ATGGCATATCTAGAGTACACTCTATTAAACAAATCTAAAAAAAGTAGAAAAACAGATTGGATAAGCTGTTATCTCGCTAATTGTCCCGTATCTGAGAAT------------...TCCCAGGAAATACCAAATGTGTTCCAA...........................ATACAATCCTTTTTGGCTCCTGTTACCACGACGGCCACCATTGGGTTTATAAAACGCCTGAAACAATATTGTGATCAG------------------------------CACAGTCATGATAGTTCGAATGAAGGCTTACAATCAATGATTCAATGTCTGTTGGTCGTCTCATTAGATATTAAACAACAATTTCAAGCAAGAAAAATTCTAAAACAAATTGTTGTATTTACAGACAATTTAGATGATCTGGATATT------------------ACTGATGAAGAAATAGACCTGCTAACGGAAGAATTAAGCACAAGAATCATTTTGATTGATTGC---------------------GGTAAAGACACTCAAGAGGAGAGGAAAAAATCGAACTGGTTAAAGTTGGTCGAAGCGATACCGAATTCAAGAATCTACAATATGAATGAACTTCTTGTTGAAATCACTTCCCCAGCAACATCTGTCGTTAAGCCAGTAAGAGTATTCTCA------------------------------GGCGAGCTTAGGTTAGGGGCAGATATATTATCAACACAAACATCGAATCCTAGCGGC
TRN  10010101100011000
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