EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF03178 - CPSF_A)
FAM  PF03178
PID  CPSF_A
DES  CPSF A subunit region
IPR  IPR004871
ANO  14
ALN  360
AID  0.23954
APH  ((Q23865_DICDI/770-1077:0.56577,(DDB1_SCHPO/730-1005:0.95920,((Q9UTT2_SCHPO/851-1149:0.63135,(O44985_CAEEL/854-1162:0.49084,SF3B3_HUMAN/860-1159:0.26218):0.25063):0.83493,(RIK1_SCHPO/708-979:1.61778,((CPSF1_HUMAN/1070-1377:0.32024,CPSF1_DROME/1083-1389:0.35560):0.35287,(O74733_SCHPO/1071-1376:0.46898,Q06632_YEAST/987-1287:0.82140):0.35415):0.60457):0.12938):0.22223):0.23673):0.17419,(Q21554_CAEEL/777-1064:0.85980,(DDB1_CERAE/785-1069:0.11058,Q9XYZ5_DROME/786-1070:0.34960):0.09383):0.25597,DDB1B_ARATH/754-1041:0.35111);
ATP  ((Q23865_DICDI/770-1077,(DDB1_SCHPO/730-1005,((Q9UTT2_SCHPO/851-1149,(O44985_CAEEL/854-1162,SF3B3_HUMAN/860-1159)),(RIK1_SCHPO/708-979,((CPSF1_HUMAN/1070-1377,CPSF1_DROME/1083-1389),(O74733_SCHPO/1071-1376,Q06632_YEAST/987-1287)))))),(Q21554_CAEEL/777-1064,(DDB1_CERAE/785-1069,Q9XYZ5_DROME/786-1070)),DDB1B_ARATH/754-1041);
ATL  11.6739
DNO  13
DLN  1080
DID  0.39133
DPH  (((((CPSF1_HUMAN/1070-1377:0.52749,(O74733_SCHPO/1071-1376:0.36148,Q06632_YEAST/987-1287:0.56063):0.28691):0.21254,RIK1_SCHPO/708-979:0.86700):0.06646,(((Q23865_DICDI/770-1077:0.51201,DDB1B_ARATH/754-1041:0.29410):0.12299,((DDB1_CERAE/785-1069:0.18516,Q9XYZ5_DROME/786-1070:0.30892):0.08360,Q21554_CAEEL/777-1064:0.60152):0.14004):0.22756,DDB1_SCHPO/730-1005:0.66593):0.05180):0.35343,Q9UTT2_SCHPO/851-1149:0.45129):0.13648,SF3B3_HUMAN/860-1159:0.33708,O44985_CAEEL/854-1162:0.38667);
DTP  (((((CPSF1_HUMAN/1070-1377,(O74733_SCHPO/1071-1376,Q06632_YEAST/987-1287)),RIK1_SCHPO/708-979),(((Q23865_DICDI/770-1077,DDB1B_ARATH/754-1041),((DDB1_CERAE/785-1069,Q9XYZ5_DROME/786-1070),Q21554_CAEEL/777-1064)),DDB1_SCHPO/730-1005)),Q9UTT2_SCHPO/851-1149),SF3B3_HUMAN/860-1159,O44985_CAEEL/854-1162);
DTL  7.74109
RID  0.239044
RPH  ((Q23865_DICDI/770-1077:0.57192,(DDB1_SCHPO/730-1005:0.97780,((Q9UTT2_SCHPO/851-1149:0.64225,(O44985_CAEEL/854-1162:0.49261,SF3B3_HUMAN/860-1159:0.26074):0.24194):0.82169,(RIK1_SCHPO/708-979:1.55458,(CPSF1_HUMAN/1070-1377:0.61375,(O74733_SCHPO/1071-1376:0.39859,Q06632_YEAST/987-1287:0.88837):0.43782):0.50644):0.16484):0.24057):0.23537):0.16812,DDB1B_ARATH/754-1041:0.34714,(Q21554_CAEEL/777-1064:0.86425,(Q9XYZ5_DROME/786-1070:0.35078,DDB1_CERAE/785-1069:0.10974):0.09082):0.26257);
RTP  ((Q23865_DICDI/770-1077,(DDB1_SCHPO/730-1005,((Q9UTT2_SCHPO/851-1149,(O44985_CAEEL/854-1162,SF3B3_HUMAN/860-1159)),(RIK1_SCHPO/708-979,(CPSF1_HUMAN/1070-1377,(O74733_SCHPO/1071-1376,Q06632_YEAST/987-1287)))))),DDB1B_ARATH/754-1041,(Q21554_CAEEL/777-1064,(Q9XYZ5_DROME/786-1070,DDB1_CERAE/785-1069)));
RTL  11.2427
LNK  CPSF1_DROME/1083-1389:Q9V726:
LNK  CPSF1_HUMAN/1070-1377:Q10570:BC017232
LNK  DDB1B_ARATH/754-1041:O49552:AL021960
LNK  DDB1_CERAE/785-1069:P33194:L20216
LNK  DDB1_SCHPO/730-1005:O13807:Z98597
LNK  O44985_CAEEL/854-1162:O44985:AF043699
LNK  O74733_SCHPO/1071-1376:O74733:AL031852
LNK  Q06632_YEAST/987-1287:Q06632:U28374
LNK  Q21554_CAEEL/777-1064:Q21554:Z68507
LNK  Q23865_DICDI/770-1077:Q23865:U50042
LNK  Q9UTT2_SCHPO/851-1149:Q9UTT2:AB034966
LNK  Q9XYZ5_DROME/786-1070:Q9XYZ5:AE003698
LNK  RIK1_SCHPO/708-979:Q10426:AL121783
LNK  SF3B3_HUMAN/860-1159:Q15393:AJ001443
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q06632_YEAST/987-1287
ASQ  EGFQSGILLINPKSWKVID--KIDFPKNSVVNEMRSSMIQINSKTKRKREYIIAGVANATTEDTP--........-PTGAFHIYDVIEVVPEP............GKPDTNYKLKEIFQEEVSGTVSTVCEVSGRFMISQSQKVLVRDIQE.----DNSVIPVAFLDIPVFVTDSKSFGNLLIIGDAMQGFQFIGFDAEPYRMISLGRSMSKFQTMSLEFLVNGGDMYFAATDADRNVHVLKYAPDEP------------------NSLSGQRLVHCSSFTLHSTNSCMMLLPR-----NEE.....FGSPQVPSFQNVGGQVDGSVFKIVPL-SEEKYRRLYVIQQQIIDRELQLGGLN
DSQ  GAAGGATTTCAAAGTGGAATTTTACTCATTAATCCAAAAAGTTGGAAGGTCATTGAT------AAAATCGACTTTCCAAAGAATTCTGTCGTCAATGAAATGAGATCCTCTATGATTCAAATTAATTCAAAAACTAAGAGGAAAAGAGAATACATTATAGCCGGTGTTGCCAATGCCACCACTGAAGACACTCCA------........................---CCAACTGGCGCTTTCCATATTTATGATGTGATAGAAGTTGTTCCCGAACCT....................................GGTAAACCTGATACCAATTATAAGCTCAAGGAAATTTTTCAAGAAGAGGTCAGTGGTACTGTATCTACTGTTTGTGAGGTTAGTGGAAGATTCATGATTAGTCAAAGCCAAAAAGTTCTAGTAAGAGATATCCAAGAA...------------GATAATTCCGTCATACCAGTGGCATTTTTGGATATTCCTGTTTTCGTTACGGATTCTAAAAGCTTTGGTAATCTTTTGATAATTGGTGACGCTATGCAGGGGTTCCAATTTATTGGTTTTGACGCAGAACCATACAGGATGATTTCATTGGGCAGAAGTATGTCGAAATTTCAAACAATGTCGCTAGAGTTTTTAGTGAACGGAGGGGATATGTATTTTGCGGCAACAGATGCTGACAGAAATGTTCATGTTTTAAAATATGCGCCAGATGAACCC------------------------------------------------------AACTCTCTTTCGGGTCAACGTTTAGTCCACTGCTCCAGTTTCACGTTGCATTCCACCAATAGTTGTATGATGCTTTTACCAAGA---------------AACGAGGAA...............TTTGGCTCTCCTCAAGTGCCATCGTTTCAAAACGTTGGTGGCCAAGTGGATGGGTCAGTCTTCAAGATAGTTCCTTTA---AGTGAGGAAAAATACAGAAGACTTTATGTGATTCAACAACAAATCATCGATCGAGAATTACAGCTAGGTGGTTTAAAC
TRN  10010101110011000
NAM  O74733_SCHPO/1071-1376
ASQ  MANTGSLDLVSPLTWTVID--SYEFQQFEIPLSVALVNLEVSETTKLRKPYIAVGTSITKGEDIA--........-VRGSTYLFEIIDVVPQP............GRPETRHKLKLVTREEIKGTVAVVCEVDGYLLSGQGQKVIVRALED.----EDHLVGVSFIDLGSYTLSAKCLRNLLLFGDVRQNVTFVGFAEEPYRMTLFSKGQEALNVSAADFLVQGENLYFVVADTSGNLRLLAYDPENP------------------ESHSGERLVTRGDFHIGNVITAMTILPKEKKHQNAE.....YGYDTGDDFSCVMVNSDGGLQMLVPI-SDRVYRRLNIIQNYLANRVNTIGGLN
DSQ  ATGGCCAACACCGGTTCGCTTGACCTTGTTTCCCCCTTAACGTGGACTGTTATAGAT------AGTTATGAATTTCAACAATTTGAGATTCCCTTATCGGTTGCTTTGGTTAACCTTGAAGTTTCTGAAACAACTAAACTGAGGAAGCCATATATCGCTGTAGGGACCTCTATCACCAAAGGTGAAGATATTGCT------........................---GTTCGCGGATCTACATATTTATTTGAAATTATTGATGTCGTGCCTCAACCC....................................GGGCGACCAGAAACTCGTCATAAATTGAAATTAGTGACTAGAGAGGAAATTAAGGGTACAGTCGCGGTGGTATGCGAAGTTGATGGGTATTTGTTGAGTGGTCAAGGCCAAAAAGTAATTGTACGTGCTTTGGAAGAC...------------GAAGACCATTTGGTTGGCGTTTCTTTTATTGACCTTGGGAGTTATACATTGTCTGCTAAATGTTTGCGAAATTTGTTATTGTTTGGCGATGTCCGACAAAACGTAACGTTTGTCGGTTTTGCCGAAGAGCCATACAGAATGACTTTATTTTCTAAAGGTCAAGAAGCGCTCAACGTATCTGCTGCAGATTTTCTTGTGCAAGGTGAGAATTTATACTTTGTAGTGGCCGATACATCTGGAAACTTAAGATTACTTGCATATGATCCTGAAAATCCC------------------------------------------------------GAATCTCATTCTGGTGAAAGACTTGTAACACGTGGAGATTTCCATATAGGAAATGTAATTACTGCTATGACGATATTGCCAAAAGAAAAAAAGCATCAAAATGCCGAG...............TATGGTTATGATACGGGAGATGACTTCTCTTGTGTAATGGTAAATAGTGATGGTGGACTTCAAATGCTGGTTCCGATT---TCTGATCGGGTGTATCGTCGTTTGAACATTATCCAGAACTACCTTGCCAACCGTGTTAATACGATAGGCGGCCTAAAT
TRN  10010101100011010
NAM  CPSF1_DROME/1083-1389
ASQ  IGSQFEMVLISPETWEIVPDASITFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNYSEDIT--........-SRGNIHIYDIIEVVPEP............GKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRD.----GD-LIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEAR------------------ESLGGQKLLRKADYHLGQVVNTMFRVQCHQKGLHQR.....QPFLYENKHFVVYGTLDGALGYCLPL-PEKVYRRFLMLQNVLLSYQEHLCGLN
NAM  CPSF1_HUMAN/1070-1377
ASQ  QQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT--........-CRGRILIMDVIEVVPEP............GQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRA.-----SELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAK------------------ESFGGMRLLRRADFHVGAHVNTFWRTPC----RGATeglskKSVVWENKHITWFATLDGGIGLLLPM-QEKTYRRLLMLQNALTTMLPHHAGLN
DSQ  CAGCAGGAGGCCTTCTCCATCCAGCTCATCTCCCCGGTCAGCTGGGAGGCTATTCCCAATGCCAGGATCGAGCTGCAGGAGTGGGAGCATGTGACCTGCATGAAGACAGTGTCTCTGCGCAGTGAGGAGACCGTGTCGGGCCTCAAAGGCTACGTGGCCGCCGGGACCTGCCTCATGCAGGGGGAGGAGGTCACG------........................---TGCCGAGGGCGGATCTTGATCATGGATGTGATTGAGGTGGTGCCCGAGCCT....................................GGCCAGCCCTTGACCAAGAACAAGTTCAAAGTCCTTTACGAGAAGGAGCAGAAGGGGCCCGTGACCGCCCTGTGCCACTGCAATGGCCACCTGGTGTCGGCCATCGGCCAGAAGATTTTCCTGTGGAGCCTGCGGGCC...---------------AGCGAGCTGACGGGCATGGCCTTCATCGACACGCAGCTCTACATACACCAGATGATCAGCGTCAAGAACTTCATCCTGGCAGCCGACGTCATGAAGAGCATTTCGCTGCTGCGCTACCAGGAGGAAAGCAAGACGCTGAGCCTGGTGTCGCGGGATGCCAAGCCCCTGGAGGTGTACAGCGTGGACTTCATGGTGGACAATGCCCAGCTGGGTTTTCTGGTGTCTGACCGCGACCGCAACCTCATGGTGTACATGTACCTGCCCGAAGCCAAG------------------------------------------------------GAGAGTTTCGGGGGCATGCGCCTGCTGCGTCGGGCAGACTTCCACGTGGGTGCCCACGTGAACACGTTCTGGAGGACCCCGTGC------------CGGGGGGCCACTgaagggctcagcaaaAAGTCGGTCGTGTGGGAGAATAAGCACATCACGTGGTTTGCCACCCTGGACGGCGGCATCGGGCTGCTGCTGCCCATG---CAGGAGAAGACCTACCGGCGGCTGCTGATGCTGCAGAACGCGCTGACCACCATGCTGCCACACCACGCCGGCCTCAAC
TRN  10010101100011011
NAM  DDB1_SCHPO/730-1005
ASQ  QRLLSFLRVYEKNTLSEIA--HHKFNEYEMVESII---LMN----DD--KRVVVGTGFNFPDQDA--........PDSGRLMVFEMTS-----............-----DNNIEMQAEHKVQGSVNTLVLYKHLIVAGINASVCIFEYEH.-----GTMHVRNSIRTPTYTIDISVNQDEIIAADLMKSITVLQF--IDDQLIEVARDYHPLWATSVEILSERK---YFVTEADGNAVILLRDNVSP------------------QLSDRKKLRWYKKFYLGELINKTRHCTFIEPQDKSL.....---V---TPQLLCATVDGSLMIVGDA-GMSNTPLLLQLQDNIRKVIPSFGGLS
DSQ  CAACGTTTATTGTCTTTCTTGAGAGTTTACGAAAAAAACACTTTAAGTGAGATTGCT------CATCATAAGTTTAATGAATATGAAATGGTTGAAAGTATCATT---------TTAATGAAT------------GATGAT------AAACGTGTGGTTGTGGGCACAGGTTTCAACTTTCCAGATCAAGATGCC------........................CCAGATTCAGGCCGTTTAATGGTCTTTGAGATGACTTCC---------------....................................---------------GATAATAATATCGAAATGCAAGCTGAACATAAGGTCCAGGGATCTGTGAACACTTTAGTTCTGTATAAACATTTGATAGTCGCCGGCATTAATGCCAGTGTCTGTATTTTCGAATATGAACAC...---------------GGTACTATGCACGTAAGGAATTCTATTAGGACACCTACTTATACGATCGACATTTCCGTTAATCAGGACGAAATCATCGCAGCAGATTTAATGAAGTCTATTACCGTTCTACAATTT------ATTGATGATCAACTAATAGAAGTTGCCAGAGACTATCATCCATTGTGGGCAACATCCGTTGAAATTTTGTCAGAAAGAAAG---------TACTTTGTAACTGAAGCAGATGGCAACGCAGTGATTCTTTTGAGAGACAATGTCTCTCCT------------------------------------------------------CAATTGTCCGATAGAAAAAAGTTACGTTGGTACAAAAAGTTCTATCTTGGTGAATTGATAAATAAAACTAGGCACTGCACATTTATAGAACCACAGGATAAATCCCTT...............---------GTC---------ACACCACAGTTGTTATGCGCAACAGTTGACGGCAGCCTCATGATTGTGGGTGATGCC---GGAATGTCTAATACTCCTTTGTTACTACAGCTGCAGGATAACATTAGAAAAGTTATACCTTCGTTTGGAGGCTTGAGT
TRN  10010101100011000
NAM  Q21554_CAEEL/777-1064
ASQ  PNTTSSFMVLDQNTFQVLH--SHEFGPWETALSCISGQFT-----NDSSTYYVVGTGLIYPDETE--........TKIGRIVVFEVDDV----............----ERSKLRRVHELVVRGSPLAIRILNGKLVAAINSSIRLFEWTT.----DKELRLECSSFNHVIALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNSQWMVTCEFITAES---ILGGEAHLNLFTVEVDKTRP-----------------ITDDGRYVLEPTGYWYLGELPKVMTRSTLVIQPE-DS.....---IIQYSQPIMFGTNQGTIGMIVQI-DDKWKKFLIAIEKAIADSVKNCMHIE
DSQ  CCAAATACCACAAGCAGTTTTATGGTTCTCGATCAAAACACATTTCAAGTACTTCAT------TCACATGAATTCGGACCATGGGAAACTGCGTTGAGTTGCATCTCTGGACAATTCACA---------------AACGACTCGAGCACCTACTACGTTGTTGGAACTGGTCTTATCTATCCAGACGAAACAGAG------........................ACGAAGATCGGTAGAATCGTGGTATTTGAAGTTGACGACGTG------------....................................------------GAAAGATCGAAACTTCGACGTGTACATGAATTGGTTGTTCGTGGAAGTCCTTTAGCTATTCGAATTCTGAATGGAAAATTGGTTGCTGCAATTAATAGCTCAATTAGACTATTCGAATGGACAACT...------------GATAAGGAACTTCGACTGGAATGCAGTAGCTTCAATCATGTCATTGCACTTGATCTTAAAGTTATGAATGAAGAGGTTGCAGTGGCTGATGTGATGAGATCTGTCTCTCTTCTCTCGTACAGAATGCTGGAAGGAAATTTTGAGGAAGTTGCTAAAGATTGGAATAGTCAATGGATGGTTACTTGCGAGTTCATCACAGCTGAATCA---------ATCCTTGGAGGAGAAGCTCATCTGAATCTGTTCACTGTAGAAGTTGATAAAACCCGTCCG---------------------------------------------------ATTACTGATGATGGTCGATATGTGTTGGAACCAACTGGATATTGGTATCTCGGAGAGCTTCCAAAAGTCATGACAAGATCGACTCTTGTCATTCAACCAGAA---GATAGT...............---------ATTATCCAGTACAGTCAACCAATCATGTTTGGAACAAATCAGGGAACAATTGGAATGATTGTGCAGATT---GATGACAAATGGAAAAAGTTTTTGATTGCAATTGAAAAGGCTATCGCAGATTCCGTTAAAAACTGCATGCACATTGAA
TRN  10010101100011000
NAM  DDB1B_ARATH/754-1041
ASQ  ESESHFVRLLDAQSFEFLS--SYPLDAFECGCSILSCSFT-----DDKNVYYCVGTAYVLPEENE--........PTKGRILVFIVE------............-----EGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWML.RDDGTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDI---YLGTDNCFNIFTVKKNNEGA------------------TDEERARMEVVGEYHIGEFVNRFRHGSLVMK-LPDS.....---DIGQIPTVIFGTVSGMIGVIASL-PQEQYAFLEKLQTSLRKVIKGVGGLS
DSQ  GAATCTGAATCGCATTTTGTCCGTCTGCTGGATGCCCAAAGTTTCGAGTTCTTGTCA------AGTTACCCTTTGGATGCCTTTGAATGTGGTTGCTCCATATTGAGCTGCTCGTTTACA---------------GACGACAAAAATGTCTATTATTGTGTTGGTACAGCATATGTTTTGCCCGAGGAAAATGAA------........................CCAACTAAGGGAAGGATACTTGTGTTTATAGTTGAA------------------....................................---------------GAAGGAAGATTGCAGCTTATCACAGAGAAGGAAACCAAGGGAGCTGTTTATTCTCTCAATGCCTTCAATGGCAAACTTCTTGCTTCTATTAATCAAAAGATTCAGTTGTATAAGTGGATGCTG...CGGGATGATGGCACTCGCGAGCTGCAATCTGAATGTGGACATCACGGTCACATACTAGCTCTCTACGTGCAGACCCGTGGAGACTTCATCGCTGTTGGTGATCTCATGAAATCAATCTCTTTATTGATCTACAAGCACGAGGAAGGTGCGATCGAGGAGAGAGCTCGGGACTATAATGCAAACTGGATGACGGCAGTTGAGATACTCAATGATGACATC---------TACCTCGGTACTGATAATTGCTTCAACATATTCACCGTAAAGAAGAACAACGAAGGTGCT------------------------------------------------------ACAGATGAAGAACGTGCTCGTATGGAGGTGGTTGGTGAGTATCACATAGGGGAATTTGTGAACCGATTCCGCCATGGCTCTCTTGTCATGAAG---CTGCCTGATTCA...............---------GATATTGGTCAGATACCGACAGTCATATTTGGCACTGTCAGTGGGATGATTGGAGTGATAGCGTCTCTG---CCTCAAGAACAGTATGCGTTTCTAGAGAAACTGCAGACGAGTCTGAGGAAAGTGATTAAAGGAGTTGGTGGTCTAAGC
TRN  10010101100011000
NAM  Q9XYZ5_DROME/786-1070
ASQ  EIDVHNLLVIDQNTFEVLH--AHQFVAPETISSLMSAKLG-----DDPNTYYVVATSLVIPEEPE--........PKVGRIIIFHYH------............-----ENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTN.----EKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDT---FLGSETNGNLFVCQKDSAAT------------------TDEERQLLPELARFHLGDTVNVFRHGSLVMQNVGER.....---TTPINGCVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVGKIE
DSQ  GAGATCGATGTACACAATCTACTGGTCATCGATCAAAACACGTTCGAGGTTCTGCAC------GCCCACCAATTCGTTGCACCCGAAACTATATCCTCTCTAATGTCCGCCAAACTGGGC---------------GATGATCCCAACACTTACTATGTGGTGGCCACATCACTTGTAATTCCAGAAGAACCGGAG------........................CCGAAGGTTGGAAGGATTATCATCTTCCATTATCAC------------------....................................---------------GAGAACAAGCTTACACAAGTGGCCGAGACCAAGGTGGATGGAACTTGCTATGCCCTGGTTGAGTTCAATGGCAAGGTCCTGGCAGGAATCGGTAGTTTTGTCCGTCTATACGAGTGGACCAAT...------------GAGAAGGAGTTGCGCATGGAGTGCAACATTCAAAATATGATTGCTGCTTTGTTTCTGAAGGCCAAGGGCGATTTTATATTGGTTGGAGATCTGATGCGCTCCATCACGCTGCTGCAGCACAAGCAGATGGAGGGAATCTTTGTCGAGATCGCGCGCGACTGCGAACCCAAGTGGATGCGAGCGGTCGAGATTCTTGACGACGATACG---------TTCCTAGGATCCGAGACAAATGGAAATCTGTTCGTGTGCCAGAAGGACAGTGCTGCTACC------------------------------------------------------ACCGATGAGGAGCGTCAGTTGCTACCGGAATTGGCGCGTTTTCATTTGGGCGATACGGTGAACGTTTTCCGTCACGGATCTCTGGTGATGCAGAACGTTGGTGAGCGA...............---------ACTACGCCGATCAATGGATGTGTTCTGTACGGAACATGCAACGGAGCCATTGGCATTGTAACCCAGATA---CCGCAGGACTTCTACGACTTCCTGCACGGCCTGGAGGAGCGGCTGAAGAAAATAATCAAGTCGGTGGGCAAGATTGAG
TRN  10010101100011001
NAM  DDB1_CERAE/785-1069
ASQ  EVEVHNLLIIDQHTFEVLH--AHQFLQNEYALSLVSCKLG-----KDPNTYFIVGTAMVYPEEAE--........PKQGRIVVFQYS------............-----DGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTT.----EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDN---FLGAENAFNLFVCQKDSAAT------------------TDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET.....---STPTQGSVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIE
DSQ  GAGGTGGAGGTGCACAACCTACTTATCATTGACCAACACACCTTTGAAGTGCTTCAT------GCCCACCAGTTTCTGCAGAATGAATATGCCCTCAGCCTGGTCTCCTGCAAGCTGGGC---------------AAAGACCCCAACACTTACTTCATTGTGGGCACAGCAATGGTGTATCCTGAAGAGGCAGAG------........................CCCAAGCAGGGTCGCATTGTGGTCTTTCAGTATTCG------------------....................................---------------GATGGAAAACTACAGACTGTGGCTGAAAAGGAAGTGAAAGGGGCCGTGTACTCTATGGTGGAATTTAACGGGAAGCTGTTAGCCAGCATCAATAGCACGGTGCGGCTCTATGAGTGGACAACA...------------GAGAAGGAGCTGCGCACTGAGTGCAACCACTACAACAACATCATGGCCCTCTACCTGAAGACCAAGGGCGACTTCATCCTGGTGGGCGACCTTATGCGCTCAGTGCTGCTGCTCGCCTACAAGCCCATGGAAGGAAACTTTGAAGAGATTGCTCGAGACTTTAATCCCAACTGGATGAGTGCTGTGGAAATCTTGGATGATGACAAT---------TTTCTGGGGGCCGAAAATGCCTTTAACTTGTTTGTGTGTCAAAAGGACAGCGCTGCCACC------------------------------------------------------ACTGACGAGGAGCGGCAGCACCTCCAGGAGGTTGGTCTTTTCCACCTGGGCGAGTTTGTCAATGTCTTTTGCCACGGCTCTCTGGTAATGCAGAATCTGGGTGAGACT...............---------TCCACCCCCACACAAGGCTCGGTGCTCTTTGGCACGGTCAATGGCATGATAGGGCTGGTGACCTCACTG---TCAGAGAGCTGGTACAACCTCCTGCTGGACATGCAGAATCGTCTCAATAAAGTCATCAAAAGTGTGGGGAAGATCGAG
TRN  10010101100011000
NAM  Q23865_DICDI/770-1077
ASQ  DEEVSYIRIYNDQTFELIS--SYKLDPYEMGWSITPCKFAG----DDVNTYLAVGTSINTPIK----........-SSGRVLLFSLSSSSSSNdkdsldnnnnnnNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIAAVHKRLFSIRYTHsKEKNCKVISSESVHKGHTMILKLASRGHFILVGDMMKSMSLLV-EQSDGSLEQIARNPQPIWIRSVAMINDDY---FIGAEASNNFIVVKKNNDST------------------NELERELLDSVGHYHIGESINSMRHGSLVR--LPDS.....---DQPIIPTILYASVNGSIGVVASI-SEEDFIFFSKLQKGLNQVVRGVGGFS
DSQ  GATGAAGAGGTTTCATACATTCGTATTTATAATGATCAAACATTTGAACTCATCTCC------TCTTATAAATTGGATCCATATGAAATGGGTTGGTCAATTACACCATGTAAATTTGCTGGT------------GATGATGTAAATACTTATTTAGCAGTTGGTACTTCAATTAATACACCAATTAAA------------........................---TCAAGTGGTAGAGTTTTATTATTTAGTTTATCATCATCATCATCATCGAATgataaagatagtttagacaataataacaacaataatAATAATAGTGGTGCTAATGGTAAATTAACTTTATTAGAAGAAATTAAATTTAGATCAAGTGTTTATTTCTTATTATCATTTAATGGTAGATTAATTGCAGCAGTACATAAAAGATTATTTTCAATTAGATATACTCATtcaAAGGAAAAGAATTGTAAAGTTATTTCAAGTGAGAGTGTACATAAAGGTCATACTATGATTTTGAAATTAGCAAGTAGAGGTCATTTCATACTCGTTGGCGATATGATGAAGTCAATGTCATTATTGGTT---GAACAATCTGATGGTTCGTTGGAACAAATCGCTAGAAATCCACAACCAATTTGGATTAGATCAGTTGCAATGATAAATGATGACTAT---------TTCATTGGTGCTGAAGCAAGTAATAATTTCATCGTTGTCAAAAAGAATAATGATTCAACT------------------------------------------------------AATGAGCTAGAGAGAGAGCTATTGGATAGTGTTGGTCATTATCATATTGGTGAATCAATCAATTCAATGAGACATGGTTCATTAGTACGT------TTACCAGATTCA...............---------GATCAACCAATTATTCCTACAATCCTTTATGCTTCTGTCAATGGTTCAATTGGTGTAGTTGCCTCTATC---TCTGAAGAGGATTTCATCTTTTTCTCAAAATTACAAAAGGGTTTAAATCAAGTAGTTCGTGGTGTTGGTGGTTTCAGT
TRN  10010101110011000
NAM  Q9UTT2_SCHPO/851-1149
ASQ  KSWVSFISVFDMISKKIIH--ESPLGDNEAAFSMTAAFFKNRD-----EFFLVAGSATNMDLECRTC........-SHGNFRVYRFHD-----............----EGKKLELISHTEIDGIPMALTPFQGRMLAGVGRFLRIYDLGN.----KKMLRKGELSAVPLFITHITVQASRIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDT---LAGGDKFGNIWLLRCPEHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQLV-------.....----EGAREVLLWTGLLGTVGVFTPFINQEDVRFFQQLEFLLRKECPPLAGRD
DSQ  AAATCTTGGGTGTCATTTATATCTGTATTTGATATGATATCTAAAAAAATAATCCAT------GAAAGTCCGCTGGGCGATAACGAAGCTGCTTTTAGTATGACAGCCGCTTTTTTCAAAAATAGAGAT---------------GAATTCTTTTTGGTAGCTGGTTCTGCCACTAATATGGATCTTGAATGTCGAACCTGT........................---TCTCATGGAAACTTTCGAGTATACCGGTTCCACGAT---------------....................................------------GAAGGTAAAAAGCTTGAGTTAATCAGCCATACGGAAATCGATGGAATTCCTATGGCTTTAACTCCCTTTCAGGGACGTATGCTAGCTGGAGTTGGACGCTTTTTACGAATTTATGATTTAGGAAAC...------------AAAAAAATGCTTCGTAAAGGTGAGTTGTCTGCTGTACCACTATTTATTACACATATTACAGTTCAAGCTAGTAGGATAGTGGTTGCAGATTCGCAATACTCAGTTAGATTCGTTGTCTATAAACCTGAGGATAATCACCTACTAACTTTTGCTGATGATACTATTCATCGGTGGACTACTACAAATGTCCTTGTCGATTATGATACT---------TTAGCAGGGGGGGATAAATTTGGTAATATTTGGCTTTTACGCTGCCCCGAACATGTTTCTAAACTAGCTGATGAAGAGAATTCTGAATCTAAATTAATTCACGAAAAGCCCTTTTTAAATTCCACACCTCACAAATTGGACCTAATGGCTCATTTCTTTACAAATGATATTCCTACTTCGCTTCAAAAGGTCCAATTGGTT---------------------...............------------GAAGGAGCTCGAGAAGTTTTGTTATGGACCGGTCTTCTGGGTACTGTTGGAGTATTTACCCCTTTTATTAACCAGGAAGATGTTCGATTTTTTCAACAACTGGAATTTTTGTTGCGAAAAGAATGTCCTCCTTTGGCTGGAAGGGAT
TRN  10010101100011000
NAM  O44985_CAEEL/854-1162
ASQ  GKWASAISLISATSGDKLS--YFELPQDENAKCVALVQFSKHPN---E-AMVLVGCGVNEVLNVHDIdpndtsirPTRGCVYTFHLSA-----............----NGDRFDFLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQ.----KKLLAKCENKNFPVSIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHT---VAVADKFGNLAVVRLPERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVSNFFIGDTITSLQKTSLM-------.....----PGANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRD
DSQ  GGAAAATGGGCATCTGCTATCAGTTTAATTTCTGCGACTTCTGGGGATAAACTCTCA------TATTTTGAGCTCCCACAAGATGAGAATGCAAAATGCGTGGCTCTTGTGCAATTCTCGAAGCATCCGAAT---------GAA---GCTATGGTGCTGGTTGGTTGTGGAGTTAATGAAGTTCTTAATGTACATGACATTgatccaaatgatacatccattcggCCAACTAGAGGATGTGTTTATACATTCCATCTATCAGCA---------------....................................------------AATGGTGATCGATTCGACTTTTTGCACAGAACGGAAACACCATTGCCAGTGGGAGCAATTCATGATTTCCGTGGCATGGCACTCGTCGGTTTTGGTCGATTCCTCCGAATGTACGACATTGGACAG...------------AAAAAGTTATTGGCAAAGTGCGAAAACAAGAATTTCCCAGTTTCAATTGTCAATATTCAATCAACAGGACAACGAATCATCGTCTCGGATAGCCAAGAATCTGTTCACTTTTTAAGATATCGGAAAGGAGATAATCAATTGGTTGTATTCGCTGATGACACAACTCCCCGTTACGTGACATGTGTTTGTGTTCTTGATTATCATACT---------GTAGCTGTTGCTGATAAGTTCGGAAATTTGGCAGTTGTTCGTCTTCCGGAAAGAGTTAATGAAGATGTACAGGATGATCCAACTGTATCGAAGAGTGTTTGGGATCGTGGATGGCTTAATGGAGCTTCACAAAAGGTCGAACTTGTTTCGAATTTCTTCATCGGTGACACGATTACAAGCCTTCAGAAGACGTCATTAATG---------------------...............------------CCTGGAGCAAATGAAGCATTAGTATATACAACAATTGGTGGAGCTATTGGATGTTTGGTTTCGTTCATGTCAAAAGATGAAGTCGACTTTTTCACAAATCTGGAAATGCATGTTCGCAGTGAATATCCGCCATTGTGTGGCCGTGAT
TRN  10010101100011000
NAM  SF3B3_HUMAN/860-1159
ASQ  GQWASVIRVMNPIQGNTLD--LVQLEQNEAAFSVAVCRFSNTGE---D-WYVLVGVAKDLILNPRSV........-AGGFVYTYKLVN-----............----NGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGK.----KKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDT---VAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------.....----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRD
DSQ  GGGCAGTGGGCCTCTGTGATCCGAGTGATGAATCCCATTCAAGGGAACACACTGGAC------CTTGTCCAGCTGGAACAGAATGAGGCAGCTTTTAGTGTGGCTGTGTGCAGGTTTTCCAACACTGGTGAA---------GAC---TGGTATGTGCTGGTGGGTGTGGCCAAGGACCTGATACTAAACCCCCGATCTGTG........................---GCAGGGGGCTTCGTCTATACTTACAAGCTTGTGAAC---------------....................................------------AATGGGGAAAAACTGGAGTTTTTGCACAAGACTCCTGTGGAAGAGGTCCCTGCTGCTATTGCCCCATTCCAGGGGAGGGTGTTGATTGGTGTGGGGAAGCTGTTGCGTGTCTATGACCTGGGAAAG...------------AAGAAGTTACTCCGAAAATGTGAGAATAAGCATATTGCCAATTATATCTCTGGGATCCAGACTATTGGACATAGGGTAATTGTATCTGATGTCCAAGAAAGTTTCATCTGGGTTCGCTACAAGCGTAATGAAAACCAGCTTATCATCTTTGCTGATGATACCTACCCCCGATGGGTCACTACAGCCAGCCTCCTGGACTATGACACT---------GTGGCTGGGGCAGACAAGTTTGGCAACATATGTGTGGTGAGGCTCCCACCTAACACCAATGATGAAGTAGATGAGGATCCTACAGGAAACAAAGCCCTGTGGGACCGTGGCTTGCTCAATGGGGCCTCCCAGAAGGCAGAGGTGATCATGAACTACCATGTCGGGGAGACGGTGCTGTCCTTGCAGAAGACCACGCTGATC---------------------...............------------CCTGGAGGCTCAGAATCACTTGTCTATACCACCTTGTCTGGAGGAATTGGCATCCTTGTGCCATTCACGTCCCATGAGGACCATGACTTCTTCCAGCATGTGGAAATGCACCTGCGGTCTGAACATCCCCCTCTCTGTGGGCGGGAC
TRN  10010101100011000
NAM  RIK1_SCHPO/708-979
ASQ  YKENYHLELVDSYDDNSFR--VFSFTENERC----------EKVLKINESSLLVGTSIIEQDKLV--........PVNGRLILLEFEK-----............----ELQSLKVVSSMVLSAAVIDLGVYNDRYIVAFGQQVAIVKLTE.----ER-LMIDSRISLGSIVLQLIVEGNEIAIADSIGRFTIMYFDGQK--FIVVARYLFGENIVKAALYEGTV---YIIATNSGLLKLLRYNKDAK------------------NFNDRFICESV--YHLHDKVSKFQNFPITNT-----.....---NSFLEPKMLFATEIGAIGSIVSL-KDKELELEELTRKIRKLKFSYLSSMD
DSQ  TACAAGGAAAATTATCACTTGGAGTTGGTCGATAGTTATGATGATAATTCGTTCAGG------GTTTTTTCTTTTACCGAAAATGAACGTTGT------------------------------GAGAAAGTTTTGAAGATTAATGAGAGTTCTTTACTTGTAGGAACAAGCATTATAGAACAAGATAAGTTGGTG------........................CCGGTAAATGGAAGATTAATTTTGTTAGAGTTTGAAAAG---------------....................................------------GAGCTTCAGTCTTTGAAGGTAGTTTCGTCTATGGTACTATCTGCGGCCGTGATAGATCTGGGGGTATATAATGATCGATACATCGTTGCATTTGGGCAACAAGTTGCAATCGTTAAACTTACCGAG...------------GAAAGG---CTTATGATAGATTCTAGGATATCACTAGGTTCTATAGTTTTACAACTCATCGTAGAGGGTAACGAGATTGCTATAGCGGACAGTATTGGACGTTTTACGATTATGTACTTCGATGGCCAAAAG------TTTATTGTCGTTGCCAGATACCTTTTTGGAGAAAACATTGTGAAAGCAGCATTATATGAAGGAACAGTT---------TATATAATAGCAACTAATAGTGGCTTGCTAAAACTTCTTCGTTATAACAAAGATGCAAAA------------------------------------------------------AACTTTAATGACAGATTCATTTGTGAAAGTGTG------TACCATCTGCATGATAAAGTTAGCAAATTTCAAAATTTCCCAATAACAAATACC---------------...............---------AATTCGTTTTTAGAGCCAAAAATGCTTTTTGCAACGGAAATTGGTGCTATTGGGAGTATAGTATCATTA---AAAGATAAGGAGCTAGAACTGGAGGAACTTACAAGAAAAATTCGAAAATTAAAATTTTCATACTTGTCATCTATGGAC
TRN  10010101100011000
//