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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF03066 - Nucleoplasmin)
FAM  PF03066
PID  Nucleoplasmin
DES  Nucleoplasmin
IPR  IPR004301
ANO  7
ALN  282
AID  0.360349
APH  ((NUPL_XENLA/13-200:0.69917,(MP62_LYTPI/1-278:0.55423,(NLP_DROME/1-150:0.24109,Q9VAC4_DROME/1-154:0.68877):0.53045):0.73118):0.13836,(NO29_XENLA/17-182:0.28150,NPM3_HUMAN/33-178:0.42727):0.22677,NPM_CHICK/15-205:0.56603);
ATP  ((NUPL_XENLA/13-200,(MP62_LYTPI/1-278,(NLP_DROME/1-150,Q9VAC4_DROME/1-154))),(NO29_XENLA/17-182,NPM3_HUMAN/33-178),NPM_CHICK/15-205);
ATL  5.08482
DNO  7
DLN  846
DID  0.464047
DPH  ((((NPM_CHICK/15-205:0.37747,NUPL_XENLA/13-200:0.45870):0.08680,(NPM3_HUMAN/33-178:0.33377,NO29_XENLA/17-182:0.27179):0.10330):0.33267,MP62_LYTPI/1-278:0.25447):0.33657,NLP_DROME/1-150:0.26077,Q9VAC4_DROME/1-154:0.38955);
DTP  ((((NPM_CHICK/15-205,NUPL_XENLA/13-200),(NPM3_HUMAN/33-178,NO29_XENLA/17-182)),MP62_LYTPI/1-278),NLP_DROME/1-150,Q9VAC4_DROME/1-154);
DTL  3.20586
RID  0.360349
RPH  ((NUPL_XENLA/13-200:0.69917,(MP62_LYTPI/1-278:0.55423,(NLP_DROME/1-150:0.24109,Q9VAC4_DROME/1-154:0.68877):0.53045):0.73118):0.13836,(NO29_XENLA/17-182:0.28150,NPM3_HUMAN/33-178:0.42727):0.22677,NPM_CHICK/15-205:0.56603);
RTP  ((NUPL_XENLA/13-200,(MP62_LYTPI/1-278,(NLP_DROME/1-150,Q9VAC4_DROME/1-154))),(NO29_XENLA/17-182,NPM3_HUMAN/33-178),NPM_CHICK/15-205);
RTL  5.08482
LNK  MP62_LYTPI/1-278:P91753:U76750
LNK  NLP_DROME/1-150:Q27415:X99293
LNK  NO29_XENLA/17-182:O42584:Z85983
LNK  NPM3_HUMAN/33-178:O75607:AY049737
LNK  NPM_CHICK/15-205:P16039:X17200
LNK  NUPL_XENLA/13-200:P05221:X04766
LNK  Q9VAC4_DROME/1-154:Q9VAC4:AE003772
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9VAC4_DROME/1-154
ASQ  MESESFYGVTLSEK------EAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAETNINDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPVHVCGKVEMNFGEFD-----------------DGQ-----------------------------------------IYEEYSDEEE-----------------------------------------------.----DSELEFD------------EEAAPQTNGKSNK
DSQ  ATGGAGTCCGAGTCGTTTTATGGTGTCACACTCAGCGAGAAG------------------GAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAGTACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCCAGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAAACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAGGTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATCAGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCAAGGTCGAGATGAACTTTGGCGAGTTTGAC---------------------------------------------------GACGGTCAG---------------------------------------------------------------------------------------------------------------------------ATTTACGAGGAGTATTCGGACGAGGAGGAG---------------------------------------------------------------------------------------------------------------------------------------------...------------GATAGCGAACTGGAATTCGAC------------------------------------GAAGAAGCAGCTCCTCAGACGAACGGCAAGAGTAATAAG
TRN  10010101100011000
NAM  NLP_DROME/1-150
ASQ  MAEESFYGVTLT---------AESDSVTWDVDEDYAR-GQKLVIKQILLGAEAKENEFNVVEVNT------PKDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNIKDDVEVV-----------------DME-----------------------------------------EDDEEDDVAE-----------------------------------------------.----DEEDEHPKKRAKI------ENAADGKNAKNNK
DSQ  ATGGCTGAGGAATCATTCTACGGAGTCACTTTGACC---------------------------GCCGAGAGCGACAGCGTCACGTGGGATGTGGACGAGGACTACGCACGC---GGCCAGAAGCTGGTCATCAAACAGATCCTCTTGGGCGCCGAGGCCAAGGAGAACGAGTTTAACGTGGTCGAGGTGAACACA------------------CCCAAGGACTCCGTGCAAATTCCCATCGCCGTATTGAAGGCCGGAGAGACCCGCGCCGTCAATCCCGACGTGGAGTTCTACGAGTCGAAGGTGACGTTCAAGCTGATCAAGGGCAGCGGACCCGTCTACATCCACGGGCACAACATCAAGGACGATGTGGAGGTGGTC---------------------------------------------------GACATGGAG---------------------------------------------------------------------------------------------------------------------------GAGGATGACGAGGAGGACGATGTGGCCGAG---------------------------------------------------------------------------------------------------------------------------------------------...------------GACGAGGAGGACGAGCACCCAAAGAAGCGCGCCAAGATC------------------GAGAACGCCGCCGATGGTAAAAATGCCAAGAACAACAAG
TRN  11011101101011001
NAM  MP62_LYTPI/1-278
ASQ  MAKEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNVIEVETIN---FDGETVIQPLLSLRLGLNESTNLDIG-LQPPVTFKLALGSGPVYLSGQHALDLQEDEEFGKDFEGAEAYEVGDEDLEDEDEGEEDEEEEETPKKGSPKRIVKKIAAVKGRMKGKGDELDEDEDDDEEEEEEEEEIQTAKGKKRPAPSAKGPAKKLAKVDKDGTSKRKVPNGSVENgHAIDDDEDDEEDEDYKVGDEEEEEEATSGEEEEEDE
DSQ  ATGGCTAAAGAATATTTCTGGGGAGCAACTCTGTCCAAGGATAAGAAGATCTTCAAATGGGACCCAGAATCCGACTTCCTGGATGATGAAGACGATGATGAGGAAGATTCCATTTCCCATTTCCTCTTCCTGAAGCAGGCTGTCCTTGGGGTAAATGCTAAGGATGATGACAGGAATGTGATTGAAGTGGAGACGATCAAC---------TTTGATGGAGAAACAGTCATTCAGCCCCTTCTTTCTCTGAGACTCGGTCTTAATGAGAGCACAAATTTGGACATCGGT---CTTCAGCCTCCCGTCACATTCAAACTAGCCCTTGGCTCGGGTCCTGTGTATCTCAGTGGACAGCATGCCTTAGATTTACAAGAGGATGAAGAGTTTGGGAAAGACTTTGAAGGTGCCGAGGCATATGAGGTGGGAGATGAGGATCTAGAAGACGAAGACGAAGGAGAGGAGGACGAGGAAGAAGAGGAGACGCCGAAGAAGGGATCACCCAAAAGAATAGTCAAGAAGATAGCTGCAGTAAAGGGTCGCATGAAAGGAAAAGGAGATGAACTAGATGAGGATGAAGATGACGATGAGGAGGAGGAGGAGGAGGAAGAAGAGATACAGACCGCAAAGGGAAAGAAAAGGCCGGCTCCATCTGCCAAAGGACCAGCAAAGAAGCTTGCTAAGGTCGACAAGGATGGAACGAGCAAGAGGAAGGTTCCCAACGGTTCCGTCGAGAATggtCATGCCATTGACGATGACGAGGATGATGAAGAAGATGAAGATTACAAGGTCGGAGATGAGGAGGAGGAGGAGGAAGCTACTAGTGGGGAAGAAGAAGAAGAAGATGAA
TRN  10010101100011000
NAM  NUPL_XENLA/13-200
ASQ  KPVSLIWGCELN---------EQDKTFEFKVEDDEEKCEHQLALRTVCLGDKAKD-EFNIVEIVTQE----EGAEKSVPIATLKPSILPMATMVGIELTPPVTFRLKAGSGPLYISGQHVAMEEDYSWAE------------EEDEGEAEG-------------------------------------EEEEEEEEDQESPPK----------------------------AVKRPAATKKAGQAkKKKLDKEDESSEEDSPTK---KGKGAGRGRKPAAKK
DSQ  AAACCTGTGTCCCTTATATGGGGGTGTGAACTGAAT---------------------------GAGCAAGACAAGACGTTTGAGTTTAAGGTAGAAGATGATGAGGAAAAATGTGAGCATCAGTTGGCGTTGCGCACGGTGTGTCTGGGGGACAAGGCAAAGGAT---GAGTTCAACATTGTAGAAATCGTTACACAAGAG------------GAGGGAGCGGAAAAATCTGTTCCAATTGCCACTCTAAAGCCTTCTATTCTACCCATGGCAACTATGGTGGGCATTGAGCTGACTCCTCCAGTTACTTTCCGGTTAAAAGCTGGTTCCGGCCCACTGTACATCAGTGGTCAACACGTAGCGATGGAGGAAGATTACTCATGGGCAGAA------------------------------------GAGGAAGATGAAGGGGAAGCTGAAGGA---------------------------------------------------------------------------------------------------------------GAAGAGGAGGAAGAAGAGGAAGAAGATCAAGAATCTCCACCCAAA------------------------------------------------------------------------------------GCTGTAAAGAGGCCTGCGGCTACCAAAAAAGCAGGCCAGGCAaagAAGAAGAAACTTGACAAAGAGGACGAGAGCTCCGAGGAAGACAGTCCAACCAAA---------AAGGGCAAAGGAGCCGGAAGAGGAAGAAAGCCGGCTGCTAAGAAG
TRN  10010101100011000
NAM  NPM_CHICK/15-205
ASQ  RPQTFLFGCELK----------AEKEYQFKVDDEENE--HQLSLRTVTLGAGAKD-ELHVVEAEALD---YEGNPTKVVLASLKMSVQPTVSLGGFEITPPFVLRLKCGSGPVYVSGQHLVALEEEPES----------EDEEEDTKIGNASTKRPASGGGAKTPQKK----------------PKLSEDDEDDDEDE---DD---------------------------------------DED.DEDDLDDDEEEIKTPMK------KPAREPAGKNMQK
DSQ  CGCCCGCAGACCTTCCTCTTCGGCTGCGAGCTTAAA------------------------------GCAGAGAAGGAATATCAGTTCAAAGTAGATGATGAGGAAAACGAA------CATCAGCTGTCCTTGAGAACGGTTACATTAGGGGCTGGAGCCAAAGAC---GAATTACATGTTGTAGAAGCAGAAGCACTGGAC---------TACGAAGGCAACCCAACTAAAGTAGTACTGGCATCTCTGAAAATGTCTGTGCAGCCTACAGTTTCACTAGGTGGATTTGAGATCACACCACCATTTGTCTTGAGGTTAAAATGTGGTTCGGGGCCTGTTTATGTCAGTGGTCAGCATCTTGTAGCATTAGAGGAAGAGCCAGAATCA------------------------------GAGGATGAGGAGGAGGATACAAAAATAGGGAATGCTTCAACAAAGAGACCAGCAAGTGGAGGAGGAGCTAAAACACCACAGAAAAAA------------------------------------------------CCAAAATTATCAGAAGATGATGAGGACGATGATGAAGATGAG---------GATGAT---------------------------------------------------------------------------------------------------------------------GATGAGGAT...GATGAAGACGACTTGGATGATGATGAGGAGGAGATTAAAACACCAATGAAG------------------AAACCTGCCCGCGAGCCTGCAGGAAAAAATATGCAGAAA
TRN  10010101100011000
NAM  NO29_XENLA/17-182
ASQ  AIESYLFGCELS---------SKTKQYTFEVNEEDDA-VHLVCLQTISLGAGAKD-EHNVVEVTAPN---YQNKEVTVPLANLKLSCQPMVNVGYFEIEAPVTFRLTSGSGPVFISGRHYVVASDDE-----------------DLSG----------------------------------------SEEEMEDEEEEEDDD---------------------------------------DDDdDDDDDDDDDDEEEITPI------KPAKKPLKTLSRT
DSQ  GCAATTGAGTCCTATTTATTTGGCTGTGAATTGTCA---------------------------TCAAAAACAAAACAATACACTTTTGAGGTAAATGAAGAGGATGATGCT---GTGCACCTTGTGTGCTTACAGACTATTAGTCTTGGGGCAGGAGCTAAGGAT---GAACACAATGTAGTGGAAGTGACTGCGCCTAAT---------TATCAAAATAAGGAAGTTACAGTTCCTTTGGCGAACCTTAAACTTTCATGTCAGCCAATGGTAAATGTGGGATATTTTGAGATTGAGGCACCCGTGACTTTTCGTTTAACATCTGGTTCTGGTCCAGTTTTTATCTCCGGTCGTCATTACGTTGTAGCCAGTGATGATGAA---------------------------------------------------GACCTGTCTGGT------------------------------------------------------------------------------------------------------------------------TCAGAGGAAGAGATGGAAGATGAGGAGGAGGAGGAGGATGATGAT---------------------------------------------------------------------------------------------------------------------GATGATGATgacGACGATGATGACGATGATGATGATGATGATGAAGAAGAAATTACTCCAATA------------------AAACCAGCTAAGAAACCCCTCAAAACTCTATCCCGTACC
TRN  10010101100011000
NAM  NPM3_HUMAN/33-178
ASQ  TMDSFFFGCELS---------GHTRSFTFKVEEEDDA-EHVLALTMLCLTEGAKD-ECNVVEVVARN---HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGPVRITGRHQIVTMSN------------------DVS------------------------------------------EEESEEEEE-----------------------------------------------.-----DSDEEEVELCPI------LPAKK---QGGRP
DSQ  ACTATGGACAGTTTTTTCTTCGGCTGTGAGCTCTCC---------------------------GGCCACACCCGCTCCTTCACCTTTAAGGTAGAGGAAGAGGATGATGCG---GAGCACGTGCTGGCACTAACCATGCTCTGCCTCACCGAGGGAGCCAAAGAC---GAGTGTAATGTGGTAGAAGTTGTGGCCCGGAAC---------CATGACCATCAGGAGATCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCTGTGCGGATCACTGGGCGGCACCAGATTGTTACGATGAGCAAT------------------------------------------------------GATGTTTCT------------------------------------------------------------------------------------------------------------------------------GAGGAGGAGAGCGAGGAAGAGGAAGAG---------------------------------------------------------------------------------------------------------------------------------------------...---------------GACAGTGATGAGGAAGAAGTTGAGCTGTGCCCCATC------------------CTTCCTGCCAAAAAG---------CAGGGGGGCAGGCCC
TRN  10010101100011011
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