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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF02921 - UCR_TM)
FAM  PF02921
PID  UCR_TM
DES  Ubiquinol cytochrome reductase transmembrane region
IPR  IPR004192
ANO  5
ALN  75
AID  0.354793
APH  (((O44512_CAEEL/79-146:0.71957,UCRI_SCHPO/43-100:0.70342):0.18931,Q9VQ28_DROME/36-101:0.16875):0.22099,UCRI_HUMAN/79-145:0.26577,Q9SMH6_CYAPA/27-96:1.21414);
ATP  (((O44512_CAEEL/79-146,UCRI_SCHPO/43-100),Q9VQ28_DROME/36-101),UCRI_HUMAN/79-145,Q9SMH6_CYAPA/27-96);
ATL  3.42363
DNO  5
DLN  225
DID  0.439897
DPH  ((UCRI_SCHPO/43-100:0.42979,O44512_CAEEL/79-146:0.58943):0.18859,(Q9VQ28_DROME/36-101:0.14910,Q9SMH6_CYAPA/27-96:0.76084):0.13098,UCRI_HUMAN/79-145:0.40379);
DTP  ((UCRI_SCHPO/43-100,O44512_CAEEL/79-146),(Q9VQ28_DROME/36-101,Q9SMH6_CYAPA/27-96),UCRI_HUMAN/79-145);
DTL  2.65252
RID  0.354793
RPH  (((O44512_CAEEL/79-146:0.71957,UCRI_SCHPO/43-100:0.70342):0.18931,Q9VQ28_DROME/36-101:0.16875):0.22099,UCRI_HUMAN/79-145:0.26577,Q9SMH6_CYAPA/27-96:1.21414);
RTP  (((O44512_CAEEL/79-146,UCRI_SCHPO/43-100),Q9VQ28_DROME/36-101),UCRI_HUMAN/79-145,Q9SMH6_CYAPA/27-96);
RTL  3.42363
LNK  O44512_CAEEL/79-146:O44512:AF038618
LNK  Q9SMH6_CYAPA/27-96:Q9SMH6:AJ250370
LNK  Q9VQ28_DROME/36-101:Q9VQ28:AE003585
LNK  UCRI_HUMAN/79-145:P47985:L32977
LNK  UCRI_SCHPO/43-100:Q09154:U40480
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9SMH6_CYAPA/27-96
ASQ  ATNAV-ATPAYSELSSVPLYQQEKKIERFTPG---DENRRPF-AYLVIGSARFAYMAWTRVAVLKVISTMSASAD
DSQ  GCGACGAACGCCGTG---GCCACCCCTGCCTACAGTGAGCTCAGCTCCGTGCCCCTGTACCAGCAGGAGAAGAAGATCGAGCGCTTCACTCCCGGC---------GATGAGAACCGTCGTCCTTTC---GCCTACCTGGTGATCGGCAGCGCCCGCTTCGCCTACATGGCGTGGACTCGTGTGGCGGTCCTGAAGGTCATCAGCACCATGAGCGCCTCGGCGGAC
TRN  11011111101111111
NAM  O44512_CAEEL/79-146
ASQ  AHTDV-TFPDMSN------YRRDSTKNTQVPARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQTLVSYKAMAAD
DSQ  GCTCACACTGATGTG---ACATTCCCCGATATGTCAAAC------------------TATCGTCGTGATTCTACAAAGAACACTCAAGTGCCAGCCCGTGACACCGAGGATCAACGTCGTGCTCTTCCAACTGCTCTGTATTATGGAGCTGGAGGAGTTCTATCTTTGTGGGCCGGAAAGGAAGTTGTACAGACTCTTGTTTCTTACAAAGCTATGGCAGCTGAT
TRN  11011101101011001
NAM  UCRI_SCHPO/43-100
ASQ  TYTDSPEMPDFSE------Y---QTKSTGDRS-------RVI-SYAMVGTMGALTAAGAQATVHDFLASWSASAD
DSQ  ACATATACTGACTCTCCGGAAATGCCAGACTTTTCGGAG------------------TAT---------CAAACAAAGAGCACTGGTGATCGTTCT---------------------CGTGTTATA---TCTTATGCCATGGTAGGCACAATGGGTGCTCTTACAGCCGCTGGAGCTCAAGCTACTGTTCATGATTTCTTGGCGAGTTGGTCTGCATCTGCTGAT
TRN  10010111110111011
NAM  Q9VQ28_DROME/36-101
ASQ  AHTDL-QVPDFSA------YRRESVKDSRRRN-DTAEERKAF-SYLMVGAGAVGGAYAAKGLVNTFIGSMSASAE
DSQ  GCACACACCGACCTG---CAGGTGCCAGACTTCTCGGCA------------------TACCGCCGGGAGTCCGTGAAGGACAGTCGTCGTCGCAAC---GACACCGCCGAGGAGCGCAAGGCCTTC---TCCTACTTGATGGTCGGCGCCGGAGCCGTGGGCGGTGCCTATGCGGCCAAGGGCCTGGTTAACACCTTCATCGGATCGATGAGCGCCTCCGCCGAA
TRN  11011111101111111
NAM  UCRI_HUMAN/79-145
ASQ  SHTDI-KVPDFSE------YRRLEVLDSTKSSRESSEARKGF-SYLVTGVTTVGVAYAAKNAVTQFVSSMSASAD
DSQ  TCCCACACAGACATC---AAGGTGCCTGACTTCTCTGAA------------------TACCGCCGCCTTGAAGTTTTAGATAGTACGAAGTCTTCAAGAGAAAGCAGCGAGGCTAGGAAAGGTTTC---TCCTATTTGGTAACTGGAGTAACTACTGTGGGTGTCGCATATGCTGCCAAGAATGCCGTCACCCAGTTCGTTTCCAGCATGAGTGCTTCTGCTGAT
TRN  10010101110011000
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