pan•dit

PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF02840
PID  Prp18
DES  Prp18 domain
IPR  IPR004098
ANO  6
ALN  148
AID  0.401831
APH  ((((O45431_CAEEL/195-340:0.64885,Q9V437_DROME/182-326:0.29734):0.09236,PRP18_HUMAN/188-332:0.16672):0.28983,Q9SA55_ARATH/229-373:0.34806):0.41515,PRP18_SCHPO/194-338:0.53665,PRP18_YEAST/100-247:0.87119);
ATP  ((((O45431_CAEEL/195-340,Q9V437_DROME/182-326),PRP18_HUMAN/188-332),Q9SA55_ARATH/229-373),PRP18_SCHPO/194-338,PRP18_YEAST/100-247);
ATL  3.67716
DNO  6
DLN  444
DID  0.480423
DPH  ((Q9SA55_ARATH/229-373:0.32284,(O45431_CAEEL/195-340:0.41372,(PRP18_HUMAN/188-332:0.29371,Q9V437_DROME/182-326:0.31926):0.07299):0.09087):0.25054,PRP18_SCHPO/194-338:0.43975,PRP18_YEAST/100-247:0.60503);
DTP  ((Q9SA55_ARATH/229-373,(O45431_CAEEL/195-340,(PRP18_HUMAN/188-332,Q9V437_DROME/182-326))),PRP18_SCHPO/194-338,PRP18_YEAST/100-247);
DTL  2.80871
RID  0.401831
RPH  ((((O45431_CAEEL/195-340:0.64885,Q9V437_DROME/182-326:0.29734):0.09236,PRP18_HUMAN/188-332:0.16672):0.28983,Q9SA55_ARATH/229-373:0.34806):0.41515,PRP18_SCHPO/194-338:0.53665,PRP18_YEAST/100-247:0.87119);
RTP  ((((O45431_CAEEL/195-340,Q9V437_DROME/182-326),PRP18_HUMAN/188-332),Q9SA55_ARATH/229-373),PRP18_SCHPO/194-338,PRP18_YEAST/100-247);
RTL  3.67716
LNK  O45431_CAEEL/195-340:O45431:Z81074
LNK  PRP18_HUMAN/188-332:Q99633:U51990
LNK  PRP18_SCHPO/194-338:O94406:AL034490
LNK  PRP18_YEAST/100-247:P33411:L03536
LNK  Q9SA55_ARATH/229-373:Q9SA55:AC006550
LNK  Q9V437_DROME/182-326:Q9V437:AE003724
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  PRP18_YEAST/100-247
ASQ  IGSTEGKPLLSMKCNLYIHEILSRWKASLEAYHPELFLDTKKALFPLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAWPIGVTSVGIHARSAHSKIQGGRNAANIMIDERTRLWITSIKRLITFEEWYTSNH
DSQ  ATTGGTTCTACTGAAGGAAAACCTCTTTTGTCAATGAAATGTAATTTATATATTCACGAAATATTATCTCGTTGGAAGGCGTCTTTGGAAGCTTATCATCCGGAGCTGTTCTTAGACACTAAAAAAGCACTCTTTCCACTCCTACTGCAACTACGAAGGAACCAGCTTGCCCCGGATTTACTTATTTCCCTTGCGACCGTTCTCTATCATTTACAACAACCTAAAGAAATAAATTTAGCCGTTCAGTCCTATATGAAACTCAGTATCGGCAATGTGGCCTGGCCTATTGGTGTTACTAGCGTAGGCATTCATGCTCGTAGTGCACATTCGAAAATTCAAGGAGGCCGGAATGCTGCTAACATAATGATTGATGAAAGAACGCGATTATGGATTACCAGTATTAAAAGATTAATAACTTTTGAAGAATGGTATACCAGCAACCAC
TRN  10010101100011000
NAM  PRP18_SCHPO/194-338
ASQ  VVAFLQHGIRIWDNFLSSKSINSF-ESSESQMQLKIFRQAKQDLDVLIQLIVDEALNDDIFKSIAEICYRCQK-HEFVKANDMYLRLTIGNAPWPIGVTMVGIHERSAHQRLQAN-PSSNILKDEKKRKCLQALKRFITFQERESSNL
DSQ  GTAGTTGCTTTTCTTCAACATGGAATCCGCATTTGGGACAACTTTTTGTCTTCAAAATCCATCAACTCTTTC---GAAAGTTCTGAGAGTCAGATGCAATTAAAAATATTTCGTCAAGCTAAGCAAGATCTTGATGTACTTATACAACTGATAGTCGATGAAGCTTTAAACGACGATATTTTTAAAAGCATAGCTGAAATTTGTTACAGATGCCAAAAA---CACGAATTTGTCAAAGCCAATGATATGTATTTACGTCTGACAATTGGAAATGCACCTTGGCCTATTGGAGTTACTATGGTTGGTATTCATGAAAGAAGTGCACATCAACGATTACAAGCAAAT---CCAAGTTCAAATATACTTAAAGACGAAAAGAAGAGAAAGTGTTTGCAAGCTTTAAAGCGATTTATTACTTTTCAGGAAAGAGAGTCATCAAACTTA
TRN  10010101100011000
NAM  Q9SA55_ARATH/229-373
ASQ  ILVFYKKLLIEWKQELDAMENTER-RTAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVNHCIK-RDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTN-SVAHIMNDETTRKYLQSVKRLMTFCQRRYPTM
DSQ  ATCCTTGTGTTTTATAAGAAGCTGTTGATTGAATGGAAACAGGAGCTTGATGCGATGGAGAACACTGAGAGG---AGAACTGCAAAAGGGAAACAGATGGTAGCCACTTTTAAGCAGTGTGCTAGGTATCTAGTTCCTCTCTTCAACTTATGCAGGAAGAAGGGTTTACCAGCTGACATTCGTCAAGCTTTAATGGTGATGGTTAACCACTGCATAAAG---CGAGACTACCTTGCTGCAATGGACCACTACATCAAACTAGCTATCGGGAACGCGCCATGGCCTATTGGAGTGACTATGGTTGGTATTCACGAACGTTCAGCTCGAGAGAAGATTTACACCAAC---AGTGTTGCTCACATCATGAACGATGAAACCACTCGCAAGTATCTTCAGTCAGTTAAAAGACTGATGACTTTCTGTCAAAGACGTTATCCAACTATG
TRN  10010101100011000
NAM  Q9V437_DROME/182-326
ASQ  IITLLTFLLKLWNDQIANYSKHEK-MSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKHLLN-RNYITASDAYLEMAIGNAPWPIGVTMVGIHARTGREKIFSK-NVAHVMNDETQRKYIQGLKRLMTKCQEYFPTD
DSQ  ATCATCACGCTGCTCACCTTCCTGCTCAAGCTGTGGAACGACCAGATCGCCAACTACAGCAAGCACGAAAAG---ATGTCCACAAAGGTGAAAATGACCCGCGTCATTTACACGCAGACTAAGGAATACGTTAAGCCGCTGTTTCGCAAGTTAAAGCATCACACCCTGCCAGAGGACATTCTGGACAGTCTGCGAGACATCTGCAAGCACCTGCTCAAC---CGCAACTATATCACAGCAAGCGATGCCTACCTAGAAATGGCCATCGGAAACGCGCCTTGGCCCATTGGTGTCACTATGGTGGGTATCCACGCTCGTACGGGTCGCGAAAAGATTTTCTCCAAA---AACGTAGCCCACGTAATGAACGATGAAACACAACGGAAGTACATCCAGGGTCTCAAACGACTGATGACCAAGTGCCAAGAGTACTTTCCCACCGAT
TRN  11011101101011010
NAM  PRP18_HUMAN/188-332
ASQ  ITKFLKFLLGVWAKELNAREDYVK-RSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQ-REYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK-HVAHVLNDETQRKYIQGLKRLMTICQKHFPTD
DSQ  ATCACCAAATTCCTGAAGTTTCTTCTTGGCGTTTGGGCTAAAGAATTGAATGCCAGAGAAGATTATGTGAAA---CGCAGTGTGCAGGGTAAACTGAACAGTGCGACCCAGAAACAGACCGAGTCCTACCTAAGACCACTTTTTAGAAAGCTACGGAAAAGGAATCTTCCTGCTGATATTAAAGAATCAATAACGGATATTATTAAATTCATGTTGCAG---AGAGAATACGTGAAGGCAAATGATGCTTATCTTCAGATGGCCATTGGAAATGCGCCTTGGCCCATCGGTGTCACTATGGTTGGTATCCATGCCAGAACTGGCAGAGAAAAGATTTTTTCCAAG---CATGTTGCACATGTTTTAAATGACGAAACTCAGCGGAAATATATTCAGGGATTGAAGAGGTTAATGACCATTTGCCAGAAACACTTTCCTACAGAC
TRN  10010101100011000
NAM  O45431_CAEEL/195-340
ASQ  ILSICRYILARWAKDLNDRPLDVK-KTAQGMHEAAHHKQTMMHLKSLMTSMERYNCNNDIRHHLAKICRLLVIDRNYLEANNAYMEMAIGNAPWPVGVTRSGIHQRPGSAKSYVS-NIAHVLNDETQRKYIQAFKRLMTKMQEYFPTD
DSQ  ATTCTTTCAATTTGCCGTTATATACTCGCAAGATGGGCTAAGGATCTGAACGATAGGCCACTGGATGTAAAA---AAGACAGCACAAGGTATGCATGAAGCAGCCCATCACAAGCAAACAATGATGCATCTTAAAAGTTTAATGACTTCAATGGAAAGATACAACTGTAATAATGATATTCGGCATCATTTGGCCAAGATTTGTAGATTGCTAGTAATTGATAGAAATTATTTGGAAGCAAATAATGCCTATATGGAAATGGCCATCGGAAATGCACCTTGGCCAGTTGGAGTAACTCGTTCTGGTATTCATCAACGTCCTGGATCTGCAAAATCATATGTCAGT---AATATTGCTCACGTACTGAATGATGAAACTCAGAGAAAGTACATTCAGGCGTTCAAACGACTGATGACCAAAATGCAAGAATATTTTCCAACGGAT
TRN  10010101100011000
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