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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF02318 - RPH3A_effector)
FAM  PF02318
PID  RPH3A_effector
DES  Rabphilin-3A effector domain
IPR  IPR003315
ANO  3
ALN  310
AID  0.443708
APH  (O54880_RAT/1-290:0.49855,RP3A_RAT/1-275:0.45543,RBF1_CAEEL/154-415:0.67282);
ATP  (O54880_RAT/1-290,RP3A_RAT/1-275,RBF1_CAEEL/154-415);
ATL  1.6268
DNO  3
DLN  930
DID  0.492824
DPH  (O54880_RAT/1-290:0.37527,RP3A_RAT/1-275:0.34081,RBF1_CAEEL/154-415:0.60401);
DTP  (O54880_RAT/1-290,RP3A_RAT/1-275,RBF1_CAEEL/154-415);
DTL  1.32009
RID  0.443708
RPH  (O54880_RAT/1-290:0.49855,RP3A_RAT/1-275:0.45543,RBF1_CAEEL/154-415:0.67282);
RTP  (O54880_RAT/1-290,RP3A_RAT/1-275,RBF1_CAEEL/154-415);
RTL  1.6268
LNK  O54880_RAT/1-290:O54880:AF022774
LNK  RBF1_CAEEL/154-415:P41885:U00032
LNK  RP3A_RAT/1-275:P47709:U12571
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  O54880_RAT/1-290
ASQ  MADTIFSSGNDQWVCPNDR--QLALRAKLQTGWSVHT-YQ----TEKQRRTQCLSPGEVEVILQVIQRAERLDILEQQRIGRLVERLETMQKNVMGNGVSQCLLCGEMLGFLGSSS--VFCKDCRKKVCTK-CGIEASP-----GQKRPLWLCKICSEQREV-WKRSGAWFYKGLPKYILPLKTPGRADDPHFRPLPVEPTEPQPQSAEVSRVYTWARGRVVSSDSDSDSDLSSSSLEDRPMPSGIKGTKYDKPRGDSGGSMESPR-MGPARPPSHLSGSQS-SLGSETGAGATD--PQGGTLPRPEPRV
DSQ  ATGGCTGACACCATCTTCAGCAGTGGAAATGATCAGTGGGTGTGCCCCAACGATCGG------CAGCTTGCTCTGAGAGCCAAGCTGCAGACAGGCTGGTCTGTGCACACA---TACCAG------------ACGGAGAAGCAGAGGAGGACTCAATGCCTGAGCCCTGGAGAGGTGGAGGTCATCCTTCAGGTCATCCAGAGAGCAGAGCGGCTGGACATCCTGGAGCAGCAGAGGATTGGGCGGCTGGTGGAGCGGCTGGAGACGATGCAGAAGAACGTGATGGGCAATGGTGTCTCCCAGTGTCTGCTCTGCGGGGAGATGTTGGGATTCCTGGGCAGCTCCTCT------GTATTCTGCAAAGACTGCCGGAAGAAAGTCTGCACCAAG---TGTGGGATCGAGGCTTCCCCC---------------GGCCAGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGAGCAGAGAGAGGTC---TGGAAGAGGTCAGGGGCCTGGTTCTACAAAGGGCTCCCCAAGTACATCTTGCCCCTGAAAACCCCTGGCCGGGCTGATGATCCCCACTTCCGACCTCTGCCTGTGGAGCCCACAGAACCACAGCCTCAGAGTGCTGAAGTCAGCCGTGTCTACACATGGGCCCGAGGGAGAGTGGTTTCTAGTGACAGTGACAGTGACTCAGATCTCAGCTCCTCCAGCCTGGAGGACAGACCTATGCCCTCTGGGATCAAGGGCACAAAATATGACAAGCCTAGAGGGGACTCAGGTGGCAGCATGGAGTCACCCAGG---ATGGGGCCTGCCCGACCGCCCAGCCATCTTTCTGGCAGCCAGAGC---AGCCTGGGCAGTGAGACGGGGGCAGGTGCTACAGAT------CCACAGGGAGGCACCCTACCCCGGCCTGAGCCCAGGGTA
TRN  10010101100011001
NAM  RP3A_RAT/1-275
ASQ  MTDTVVN----RWMYPGDGPLQSNDKEQLQAGWSVHPGAQ----TDRQRKQEELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSAC--VVCEDCKKNVCTK-CGVETSN-----NRPHPVWLCKICLEQREV-WKRSGAWFFKGFPKQVLPQPMPIKKTKPQ-QPAGEPATQEQPTPESRHPARAPARG----------------DMEDRRAPGQKPGPDLTSAPGRGSHGPPTRR-ASEARMSTTTRDSEGWDHGHGGGAGDTSRSPGGEQGLRRANSV
DSQ  ATGACTGACACTGTGGTGAAC------------CGTTGGATGTACCCTGGTGATGGCCCACTGCAGTCAAATGACAAGGAACAGCTGCAGGCAGGATGGTCCGTCCATCCTGGAGCACAG------------ACGGACAGGCAGAGGAAGCAGGAAGAACTGACAGACGAGGAGAAGGAGATAATCAACCGGGTGATAGCTCGGGCAGAGAAGATGGAAACCATGGAGCAGGAGCGCATCGGGCGCCTGGTGGACCGTCTGGAGACCATGAGGAAGAATGTAGCTGGAGATGGTGTGAACCGTTGCATCCTGTGCGGGGAACAGCTGGGCATGCTGGGCTCTGCGTGT------GTCGTGTGTGAAGACTGTAAGAAGAATGTCTGCACCAAG---TGTGGGGTGGAGACCTCCAAC---------------AACCGTCCGCATCCAGTATGGCTCTGTAAGATCTGCCTTGAGCAGAGAGAGGTC---TGGAAGCGCTCGGGAGCATGGTTCTTCAAGGGTTTCCCAAAACAGGTCCTTCCACAGCCCATGCCTATAAAGAAGACCAAGCCCCAG---CAGCCTGCTGGTGAGCCGGCCACCCAGGAGCAGCCTACACCCGAGTCCAGGCATCCAGCCAGAGCTCCAGCTCGAGGT------------------------------------------------GACATGGAGGACAGGAGGGCCCCAGGACAGAAGCCAGGCCCTGACCTCACCTCTGCTCCTGGACGAGGAAGCCATGGGCCTCCCACACGCAGG---GCCTCTGAGGCCCGGATGAGTACAACCACCCGTGATTCTGAGGGCTGGGACCATGGTCATGGTGGGGGTGCTGGAGACACCAGCCGGAGCCCAGGAGGTGAGCAAGGTTTGAGGCGAGCTAACTCAGTC
TRN  10010101100011001
NAM  RBF1_CAEEL/154-415
ASQ  MNDWEIGGTQNKWVCPSDR--HLHLRAQLKSGWSVRT-ATARSPTNSKAQTGSITAAEQEHIQKVLAKAEESKSKEQQRIGKMVDRLEKMRRRATGNGVTHCLLCHTEFGLLASKSYAAMCVDCRKYVCQRNCGVETTDVNQTTGKVETVFLCKICSEAREVLWKKSGAWFYKEMPEF-------QRPDDRL--PYYVPVTTNGTLPNASSAA-TPLSG----------------------TPGGA-GPQPMTMPSTSSCQMTTPKWASPGVCNSPGLQMNG---------GPTSPLPNG---TRRNTGH
DSQ  ATGAATGATTGGGAAATCGGTGGAACACAGAATAAATGGGTCTGTCCAAGTGATCGG------CATTTGCATTTAAGAGCACAATTAAAATCAGGATGGTCCGTACGGACG---GCAACAGCGCGATCCCCAACCAACTCAAAAGCTCAAACTGGATCGATTACTGCCGCCGAGCAAGAACACATTCAGAAGGTCCTTGCAAAAGCGGAAGAGAGCAAATCAAAAGAACAACAGAGGATTGGAAAAATGGTGGATCGTCTAGAAAAAATGAGGAGGCGGGCGACAGGAAATGGTGTAACACACTGTTTGTTATGTCATACCGAGTTCGGACTACTCGCATCGAAAAGCTATGCAGCAATGTGTGTGGATTGTAGAAAGTACGTGTGCCAACGAAACTGCGGAGTCGAGACAACTGATGTGAATCAAACGACTGGAAAAGTGGAGACAGTATTCCTTTGCAAAATTTGCTCAGAAGCCAGAGAGGTGCTATGGAAGAAGTCTGGCGCCTGGTTCTACAAAGAGATGCCAGAATTC---------------------CAACGTCCAGATGACCGACTA------CCCTATTACGTTCCAGTCACTACAAACGGAACTCTTCCGAATGCTTCTTCTGCAGCT---ACTCCACTTTCTGGA------------------------------------------------------------------ACACCCGGTGGTGCT---GGACCACAGCCAATGACAATGCCATCCACATCATCTTGTCAGATGACAACACCAAAATGGGCATCGCCGGGAGTATGTAACTCACCAGGACTTCAGATGAATGGA---------------------------GGACCCACTTCACCTCTTCCAAATGGA---------ACTCGAAGAAATACTGGACAT
TRN  10010101110011000
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