pan•dit

PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF02278
PID  Lyase_8
DES  Polysaccharide lyase family 8, super-sandwich domain
IPR  IPR003159
ANO  5
ALN  295
AID  0.330168
APH  ((HYSA_STAAU/435-699:0.42109,(HYSA_STRA3/617-905:0.33306,HYSA_STRPN/656-924:0.28495):0.32804):0.71512,CSLA_PEDHE/336-592:1.10781,O86516_STRCO/402-656:0.67157);
ATP  ((HYSA_STAAU/435-699,(HYSA_STRA3/617-905,HYSA_STRPN/656-924)),CSLA_PEDHE/336-592,O86516_STRCO/402-656);
ATL  3.86164
DNO  4
DLN  885
DID  0.404673
DPH  ((HYSA_STAAU/435-699:7.64845,HYSA_STRPN/656-924:10.63117):8.61729,CSLA_PEDHE/336-592:15.14306,O86516_STRCO/402-656:11.33153);
DTP  ((HYSA_STAAU/435-699,HYSA_STRPN/656-924),CSLA_PEDHE/336-592,O86516_STRCO/402-656);
DTL  53.5164
RID  0.296386
RPH  ((O86516_STRCO/402-656:0.66775,CSLA_PEDHE/336-592:1.08784):0.71746,HYSA_STRPN/656-924:0.61288,HYSA_STAAU/435-699:0.36171);
RTP  ((O86516_STRCO/402-656,CSLA_PEDHE/336-592),HYSA_STRPN/656-924,HYSA_STAAU/435-699);
RTL  3.44762
LNK  CSLA_PEDHE/336-592:Q59288:U27583
LNK  HYSA_STAAU/435-699:Q59801:U21221
LNK  HYSA_STRA3/617-905:Q53591:
LNK  HYSA_STRPN/656-924:Q54873:AE007344
LNK  O86516_STRCO/402-656:O86516:AL939124
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  O86516_STRCO/402-656
ASQ  AAPEPVGHHLFAAMDRAVHR--RPAFTAGLAMASDRIAHYECGNGENPRGWHTGAGMLTWWANGTRADQYTDWFWPTVDWYRLPGTTVSTKRLADRAGGE-------------WGAPKPDVRWVGG-ATDGEYAAVGQHLKGLGSTLEARKSWFFLDDAVVCLGAGITCAD-GVPVETVVDNRN----LGEGGTQAL-----VRGR-------------HWAHLEGHGGWIVPGGALRTLREDRTGAWSDIN-TTSTTERRTRRWQTLWLDHGTDPAGADYVYTVMPGASRAALA
DSQ  GCCGCCCCCGAACCCGTCGGACACCACCTCTTCGCGGCCATGGACCGCGCCGTGCACCGC------CGCCCCGCCTTCACCGCGGGCCTCGCCATGGCCAGTGACCGCATCGCCCACTACGAGTGCGGCAACGGCGAGAACCCGCGCGGCTGGCACACCGGCGCGGGCATGCTCACCTGGTGGGCGAACGGGACGAGGGCGGATCAGTACACCGACTGGTTCTGGCCGACCGTCGACTGGTACCGGCTGCCCGGCACCACCGTCTCCACCAAGCGCCTGGCCGACCGGGCGGGCGGCGAG---------------------------------------TGGGGCGCACCCAAACCGGACGTGCGATGGGTCGGCGGC---GCGACCGACGGCGAGTACGCGGCCGTGGGCCAGCACCTCAAGGGGCTCGGCTCCACACTGGAGGCCCGCAAGTCCTGGTTCTTCCTCGACGACGCCGTGGTCTGCCTGGGCGCGGGCATCACGTGCGCGGAC---GGCGTACCGGTCGAGACGGTCGTGGACAACCGCAAC------------CTGGGGGAGGGCGGCACCCAGGCCCTG---------------GTGCGCGGCCGG---------------------------------------CACTGGGCCCACCTGGAGGGACACGGCGGCTGGATCGTGCCCGGGGGCGCCCTGCGGACCCTGCGCGAGGACCGCACCGGTGCCTGGTCCGACATCAAC---ACCACCAGCACGACCGAGCGCCGCACCCGCCGCTGGCAGACCCTCTGGCTCGACCACGGCACCGATCCGGCCGGCGCCGACTACGTCTACACCGTCATGCCGGGCGCCTCCCGGGCGGCCCTCGCC
TRN  10010101100011011
NAM  CSLA_PEDHE/336-592
ASQ  IEP---YHHQFWNGDYVQHLR--PAYSFNVRMVSKRTRRSESGNKENLLGRYLSDGATNIQL---RGPEYYN-IMPVWEWDKIPGITSRDYLTDRPLTKL-------------WGEQG-SNDFAGG-VSDGVYGASAYALD--YDSLQAKKAWFFFDKEIVCLGAGINSNAPENITTTLNQSWLNGPVISTAGKTGRGKITTFKAQG-----------QFWLLHDAIGYYFPEGANLSLSTQSQKGNWFHIN-NSHSKDEVSGDVFKLWINHGARPENAQYAYIVLPGINKPEEI
DSQ  ATTGAGCCC---------TATCACCATCAGTTCTGGAATGGTGATTATGTGCAACATTTAAGA------CCTGCCTATTCTTTTAATGTTCGTATGGTGAGTAAGCGGACCCGACGCAGTGAATCCGGCAATAAAGAAAACCTGCTGGGCAGGTATTTATCTGATGGGGCTACTAACATACAATTG---------CGCGGACCAGAATACTATAAC---ATTATGCCGGTATGGGAATGGGACAAGATTCCTGGCATAACCAGCCGTGATTATTTAACCGACAGACCTTTGACGAAGCTT---------------------------------------TGGGGAGAGCAGGGG---AGCAATGACTTTGCAGGAGGG---GTGTCTGATGGTGTATACGGGGCCAGTGCCTACGCATTGGAT------TACGATAGCTTACAGGCAAAGAAAGCCTGGTTCTTTTTTGACAAAGAGATTGTATGTCTTGGTGCCGGTATCAACAGCAATGCCCCTGAAAACATTACCACTACCCTTAACCAGAGCTGGTTAAATGGCCCGGTTATAAGTACTGCAGGTAAAACCGGCCGGGGTAAAATAACAACGTTTAAAGCACAGGGA---------------------------------CAGTTCTGGTTGTTGCACGATGCGATTGGTTATTACTTTCCTGAAGGGGCCAACCTTAGTCTGAGTACCCAGTCGCAAAAAGGCAATTGGTTCCACATCAAC---AATTCACATTCAAAAGATGAAGTTTCTGGTGATGTATTTAAGCTTTGGATCAACCATGGTGCCAGGCCAGAAAATGCGCAGTATGCTTATATCGTTTTGCCGGGAATAAACAAGCCGGAAGAAATT
TRN  10010101100011000
NAM  HYSA_STAAU/435-699
ASQ  KNGLTQQLKIYNDMDRVTYHNKDLDFAFGLSMTSKNVARYESINGENLKGWHTGAGMSYLYN--SDVKHYHDNFWVTADMKRLSGTTTLDNEILKD-TDD-------------KKSSK--TFVGGT-KVDDQHASIGMDFENQDKTLTAKKSYFILNDKIVFLGTGIKSTDSSKNPVTTIENRK---ANGYTLYTDDKQTTNSDNQ-----ENNSVFLESTDTKKNIGYHFLNKPKITVKKESHTGKWKEIN-KSQKDTQKTDEYYEVTQKHSNS--DNKYGYVLYPGLSKDVFK
DSQ  AAAAACGGATTAACACAACAACTTAAAATATATAATGACATGGATCGTGTCACCTATCATAACAAAGACTTAGACTTTGCATTTGGTTTAAGTATGACGTCGAAAAACGTAGCACGCTATGAAAGTATCAACGGAGAGAATTTAAAAGGTTGGCACACTGGTGCTGGAATGTCTTATTTATATAAC------AGCGATGTCAAACACTATCATGATAACTTCTGGGTGACAGCCGATATGAAACGTTTATCAGGTACAACAACTTTAGACAATGAAATATTAAAAGAT---ACGGATGAT---------------------------------------AAAAAGTCGAGTAAA------ACTTTTGTTGGCGGAACA---AAAGTTGATGACCAACATGCTAGTATCGGAATGGATTTTGAAAATCAGGACAAAACTTTAACTGCCAAAAAATCATATTTCATATTAAACGATAAAATTGTCTTCTTAGGAACTGGCATTAAAAGTACTGATTCATCAAAGAATCCAGTTACAACGATTGAAAATCGCAAA---------GCGAATGGGTATACGTTATATACAGACGATAAACAAACAACCAATTCTGATAATCAG---------------GAAAACAATTCAGTCTTTTTAGAGTCCACAGATACCAAAAAGAACATCGGTTATCATTTTTTAAACAAACCGAAAATAACTGTAAAAAAAGAAAGTCATACTGGTAAGTGGAAAGAAATAAAT---AAAAGTCAAAAGGATACACAAAAAACTGATGAGTATTATGAAGTAACTCAAAAGCATTCTAATTCT------GACAATAAATATGGATATGTGTTGTATCCAGGCTTATCTAAAGATGTCTTTAAG
TRN  10010101110011000
NAM  HYSA_STRPN/656-924
ASQ  PRP--SYLSAFNKMDKTAMYNAEKGFGFGLSLFSSRTLNYEHMNKENKRGWYTSDGMFYLYN--GDLSHYSDGYWPTVNPYKMPGTTETDAKRADS--DT-------------GKVLP-SAFVGTS-KLDDANATATMDFTNWNQTLTAHKSWFMLKDKIAFLGSNIQNTS-TDTAATTIDQRKLESGNPYKVYVNDKEASLTEQE-KDYPETQSVFLESFDSKKNIGYFFFKKSSISMSKALQKGAWKDIN-EGQSDKEVENEFLTISQAHKQN--RDSYGYMLIPNVDRATFN
DSQ  CCAAGACCA------AGTTACCTATCTGCCTTTAACAAGATGGATAAAACAGCCATGTACAATGCAGAGAAAGGGTTTGGATTTGGCTTGTCACTCTTTTCCAGTCGTACCTTGAATTACGAACACATGAACAAGGAAAATAAACGTGGTTGGTATACGAGTGATGGGATGTTCTATCTTTACAAT------GGCGATTTGAGTCACTATAGCGATGGCTACTGGCCAACAGTTAATCCATATAAGATGCCTGGTACAACAGAGACGGATGCTAAGAGAGCGGATAGC------GATACA---------------------------------------GGTAAAGTTTTACCG---TCTGCTTTCGTTGGAACGAGC---AAACTAGATGATGCCAATGCGACAGCAACCATGGATTTCACCAACTGGAATCAAACATTGACTGCTCATAAGAGCTGGTTTATGCTAAAGGATAAGATCGCCTTTTTAGGAAGCAATATCCAAAACACTTCA---ACAGATACTGCTGCAACTACAATTGACCAGAGAAAACTGGAATCAGGTAATCCATATAAAGTCTATGTCAATGATAAAGAAGCCTCCCTTACAGAACAAGAA---AAGGATTATCCTGAAACCCAAAGTGTCTTTTTAGAATCGTTCGATTCGAAAAAGAATATTGGTTACTTTTTCTTTAAGAAGAGTTCAATCAGTATGAGTAAGGCTTTGCAAAAGGGAGCCTGGAAGGATATCAAT---GAAGGACAGTCAGACAAGGAAGTTGAAAATGAATTTCTTACGATTAGTCAGGCTCATAAGCAAAAT------AGAGATTCTTATGGCTATATGCTCATTCCTAACGTGGATCGTGCCACCTTCAAT
TRN  10010101100011000
NAM  HYSA_STRA3/617-905
ASQ  TKPLKSNLSTFNSMDRLAYYNAEKDFGFALSLHSKRTLNYEGMNDENTRDWYTGDGMFYLYN--SDQSHYSNHFWPTVNPYKMAGTTEKDAKREDT-TKEFMSKHSKDAKEKTGQVTG-TSDFVGSVKLNDHFALAAMDFTNWDRTLTAQKGWVILNDKIVFLGSNIKNTNGIGNVSTTIDQRKDDSKTPYTTYVNGKTIDLKQASSQQFTDTKSVFLESKEPGRNIGYIFFKNSTIDIERKEQTGTWNSINRTSKNTSIVSNPFITISQKHDNK--GDSYGYMMVPNIDRTSFD
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