pan•dit

PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF02269
PID  TFIID-18kDa
DES  Transcription initiation factor IID, 18kD subunit
IPR  IPR003195
ANO  7
ALN  93
AID  0.333418
APH  (((SUPT3_HUMAN/106-198:0.49365,(SPT3_SCHPO/8-99:0.18278,SPT3_YEAST/5-96:0.21151):0.46664):0.82832,(O60076_SCHPO/16-105:0.41613,TAF13_YEAST/9-101:0.69781):0.27242):0.22458,Q17957_CAEEL/27-116:0.45161,TAF13_HUMAN/30-119:0.28172);
ATP  (((SUPT3_HUMAN/106-198,(SPT3_SCHPO/8-99,SPT3_YEAST/5-96)),(O60076_SCHPO/16-105,TAF13_YEAST/9-101)),Q17957_CAEEL/27-116,TAF13_HUMAN/30-119);
ATL  4.52717
DNO  6
DLN  279
DID  0.464669
DPH  (TAF13_YEAST/9-101:0.44856,O60076_SCHPO/16-105:0.35526,((SPT3_SCHPO/8-99:0.20580,SPT3_YEAST/5-96:0.31410):0.53391,(Q17957_CAEEL/27-116:0.35681,TAF13_HUMAN/30-119:0.25027):0.18050):0.13468);
DTP  (TAF13_YEAST/9-101,O60076_SCHPO/16-105,((SPT3_SCHPO/8-99,SPT3_YEAST/5-96),(Q17957_CAEEL/27-116,TAF13_HUMAN/30-119)));
DTL  2.77989
RID  0.337706
RPH  (TAF13_HUMAN/30-119:0.27071,Q17957_CAEEL/27-116:0.46457,((SPT3_SCHPO/8-99:0.10274,SPT3_YEAST/5-96:0.29081):1.19712,(O60076_SCHPO/16-105:0.41864,TAF13_YEAST/9-101:0.69936):0.26278):0.23422);
RTP  (TAF13_HUMAN/30-119,Q17957_CAEEL/27-116,((SPT3_SCHPO/8-99,SPT3_YEAST/5-96),(O60076_SCHPO/16-105,TAF13_YEAST/9-101)));
RTL  3.94095
LNK  O60076_SCHPO/16-105:O60076:AL023776
LNK  Q17957_CAEEL/27-116:Q17957:Z49909
LNK  SPT3_SCHPO/8-99:O14311:AF005931
LNK  SPT3_YEAST/5-96:P06844:X04383
LNK  SUPT3_HUMAN/106-198:O75486:
LNK  TAF13_HUMAN/30-119:Q15543:X84003
LNK  TAF13_YEAST/9-101:P11747:M17512
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  TAF13_YEAST/9-101
ASQ  NLFNKDVSSLLYAYGDVPQPLQATVQCLDELVSGYLVDVCTNAFHTAQNSQRNKLRLEDFKFALRKDPIKLGRAEELIATNKLITEAKKQFNE
DSQ  AATCTGTTTAACAAGGATGTAAGTTCCTTGCTTTACGCTTACGGCGATGTGCCGCAGCCACTACAAGCTACTGTGCAGTGTTTGGATGAATTGGTATCTGGATATTTGGTGGATGTTTGTACTAACGCATTCCATACAGCCCAGAATTCTCAGCGCAATAAGCTCCGATTGGAAGATTTCAAGTTTGCCCTTCGTAAAGACCCGATAAAGCTTGGGAGAGCAGAAGAACTGATAGCTACTAATAAGTTGATTACGGAAGCTAAGAAGCAGTTCAATGAG
TRN  10010101100011011
NAM  O60076_SCHPO/16-105
ASQ  HLFTKDLKSLMYAFGDDVNPAPDSINVLEEIVVDYINEMCLEAARIAGNR--NKVKVDDFKFALRDDPKKLGRVEELLRSSNFSVAGHP-FQG
DSQ  CATCTCTTTACGAAGGATTTGAAATCTCTAATGTACGCATTTGGAGATGATGTGAATCCTGCTCCAGATAGCATAAATGTATTGGAAGAAATTGTTGTTGACTATATCAATGAAATGTGCCTGGAAGCTGCTAGGATAGCTGGAAATAGA------AATAAGGTCAAAGTAGATGACTTTAAATTTGCTTTGCGTGATGATCCTAAGAAACTTGGTCGTGTTGAGGAATTGTTGAGATCATCAAATTTTAGTGTCGCAGGTCACCCA---TTTCAGGGC
TRN  10010101100011001
NAM  TAF13_HUMAN/30-119
ASQ  RLFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQG---RVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFDE
DSQ  AGACTTTTTTCTAAAGAATTGCGATGTATGATGTATGGCTTTGGGGATGACCAGAATCCTTATACTGAGTCAGTGGATATTCTTGAAGATCTTGTCATAGAGTTTATCACTGAAATGACTCACAAGGCAATGTCAATTGGAAGACAAGGT---------CGAGTACAAGTTGAAGATATCGTCTTCTTGATTCGAAAGGACCCAAGGAAGTTTGCCAGGGTTAAAGACTTGCTTACTATGAATGAAGAATTGAAACGAGCTAGAAAAGCATTTGATGAA
TRN  10010101110011001
NAM  Q17957_CAEEL/27-116
ASQ  HVLRRDLRSMVYGFGDDKEPYDKTLDTLEAIVLNYIKELCQLAMKVGKPD---KMALEDIHYLIRRDPKKFSRVKDLLSMSEELKKARKQFED
DSQ  CACGTGCTGAGACGAGATTTGAGATCAATGGTCTATGGCTTTGGAGATGATAAGGAGCCATACGACAAGACCCTGGACACTCTTGAGGCCATTGTCCTAAACTACATCAAAGAGTTATGCCAACTGGCGATGAAAGTTGGAAAACCGGAT---------AAAATGGCACTTGAGGACATTCACTATCTGATTCGTCGTGATCCGAAGAAGTTCTCGAGAGTCAAGGATCTGTTGTCAATGTCGGAAGAGTTGAAGAAGGCAAGAAAGCAGTTCGAAGAT
TRN  10010101100011000
NAM  SPT3_YEAST/5-96
ASQ  HKYRVEIQQMMFVSGEINDPPVETTSLIEDIVRGQVIEILLQSNKTAHLRGSRSILPEDVIFLIRHDKAKVNRLRTYLSWKDLR-KNAKDQDA
DSQ  CATAAGTATCGTGTGGAGATTCAACAGATGATGTTTGTCTCTGGTGAAATTAACGACCCACCCGTAGAAACCACATCACTGATAGAAGATATAGTGAGGGGTCAAGTGATAGAAATTCTTTTACAGTCAAACAAAACGGCGCATCTTAGGGGAAGTAGGAGCATTCTCCCTGAAGACGTCATTTTCTTGATCAGACACGACAAGGCCAAAGTCAATCGTTTGAGAACATATCTGTCATGGAAGGATTTGCGT---AAAAACGCCAAGGACCAAGATGCT
TRN  10010101100011000
NAM  SPT3_SCHPO/8-99
ASQ  SKYRVEIQQMMFILGEVQDPLPETTQLVEELIRGQVMEMLIQANELALRRGSRSITVEDLFFLIRHDRAKVNRLKTYLSWKEVR-KKAKEQDA
DSQ  AGTAAATATCGTGTTGAAATTCAACAAATGATGTTCATTCTAGGGGAGGTGCAGGATCCTCTCCCAGAAACCACACAATTAGTCGAAGAGCTAATACGTGGACAAGTGATGGAGATGTTAATTCAGGCAAATGAGCTAGCTTTACGACGTGGCTCAAGATCTATTACTGTGGAAGATTTATTTTTCTTAATTCGCCATGATCGTGCAAAGGTGAATCGACTAAAGACATACCTGTCATGGAAGGAAGTGCGC---AAGAAAGCGAAGGAGCAGGATGCC
TRN  10010101100011000
NAM  SUPT3_HUMAN/106-198
ASQ  ISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDE
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