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PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF02203
PID  TarH
DES  Tar ligand binding domain homologue
IPR  IPR003122
ANO  10
ALN  141
AID  0.191348
APH  (MCPS_ENTAE/44-183:0.43469,MCP1_ECOLI/44-181:0.14013,((((((O05244_BACSU/36-154:0.44227,(TLPB_BACSU/33-150:0.59501,MCPA_BACSU/33-150:0.47149):0.23227):2.70325,MCP3_ECOLI/47-185:2.33995):0.00000,MCP4_ECOLI/44-177:1.18573):0.04708,MCPC_SALTY/43-180:0.99297):0.22397,MCP2_SALTY/44-179:0.73419):0.19878,MCPD_ENTAE/43-174:1.21805):0.19864);
ATP  (MCPS_ENTAE/44-183,MCP1_ECOLI/44-181,((((((O05244_BACSU/36-154,(TLPB_BACSU/33-150,MCPA_BACSU/33-150)),MCP3_ECOLI/47-185),MCP4_ECOLI/44-177),MCPC_SALTY/43-180),MCP2_SALTY/44-179),MCPD_ENTAE/43-174));
ATL  12.1585
DNO  10
DLN  423
DID  0.362814
DPH  (((MCP4_ECOLI/44-177:0.47443,(MCPD_ENTAE/43-174:0.59495,(((MCP2_SALTY/44-179:0.55599,(MCP1_ECOLI/44-181:0.20828,MCPS_ENTAE/44-183:0.23658):0.14414):0.08551,MCPC_SALTY/43-180:0.69357):0.00000,MCP3_ECOLI/47-185:1.28787):0.13063):0.22276):0.97486,O05244_BACSU/36-154:0.10380):0.41691,TLPB_BACSU/33-150:0.32358,MCPA_BACSU/33-150:0.38441);
DTP  (((MCP4_ECOLI/44-177,(MCPD_ENTAE/43-174,(((MCP2_SALTY/44-179,(MCP1_ECOLI/44-181,MCPS_ENTAE/44-183)),MCPC_SALTY/43-180),MCP3_ECOLI/47-185))),O05244_BACSU/36-154),TLPB_BACSU/33-150,MCPA_BACSU/33-150);
DTL  6.83792
RID  0.191348
RPH  (MCPS_ENTAE/44-183:0.43469,MCP1_ECOLI/44-181:0.14013,((((((O05244_BACSU/36-154:0.44227,(TLPB_BACSU/33-150:0.59501,MCPA_BACSU/33-150:0.47149):0.23227):2.70325,MCP3_ECOLI/47-185:2.33995):0.00000,MCP4_ECOLI/44-177:1.18573):0.04708,MCPC_SALTY/43-180:0.99297):0.22397,MCP2_SALTY/44-179:0.73419):0.19878,MCPD_ENTAE/43-174:1.21805):0.19864);
RTP  (MCPS_ENTAE/44-183,MCP1_ECOLI/44-181,((((((O05244_BACSU/36-154,(TLPB_BACSU/33-150,MCPA_BACSU/33-150)),MCP3_ECOLI/47-185),MCP4_ECOLI/44-177),MCPC_SALTY/43-180),MCP2_SALTY/44-179),MCPD_ENTAE/43-174));
RTL  12.1585
LNK  MCP1_ECOLI/44-181:P02942:U14003
LNK  MCP2_SALTY/44-179:P02941:AE008785
LNK  MCP3_ECOLI/47-185:P05704:K02073
LNK  MCP4_ECOLI/44-177:P07018:J01705
LNK  MCPA_BACSU/33-150:P39214:L29189
LNK  MCPC_SALTY/43-180:Q02755:L06029
LNK  MCPD_ENTAE/43-174:P21823:M26411
LNK  MCPS_ENTAE/44-183:P21822:M26411
LNK  O05244_BACSU/36-154:O05244:Z93935
LNK  TLPB_BACSU/33-150:P39217:L29189
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  MCP3_ECOLI/47-185
ASQ  DRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESEIKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKNG-MFEAIINHE-SEQIRPLDNAYTDILNKAVKIRSTR
DSQ  GATCGCGATCAGCGTGATGTTACTGCGGAGATTGAGATTCGGACCGGGTTAGCGAACAGTTCAGATTTTTTGCGTTCAGCCCGGATCAATATGATTCAGGCCGGGGCTGCGAGTCGTATTGCGGAAATGGAAGCAATGAAGCGAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGC---ATGTTTGAAGCGATTATCAATCATGAA---AGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATATTTTGAACAAAGCCGTTAAGATACGTAGCACCAGA
TRN  10010101100011000
NAM  MCP4_ECOLI/44-177
ASQ  EQSNQQRAALAQTRAVMLQASTALNKAGTLTA---LSYPADDIK--TLMTTARAS-LTQSTTLFKSFMAMTAGNEHVRGLQKETEKSFARWHNDLEHQATWLESN-QLSDFLTAPVQGSQNAFDVNFEAWQLEINHVLEAA
DSQ  GAGCAGAGCAATCAGCAACGTGCGGCATTAGCGCAAACTCGGGCGGTAATGTTACAGGCCAGTACCGCGCTGAACAAAGCGGGCACTCTGACGGCA---------CTTAGCTATCCGGCGGATGACATTAAA------ACGTTGATGACGACGGCGCGCGCCAGT---CTGACGCAATCCACCACGCTGTTTAAAAGTTTTATGGCGATGACTGCGGGCAACGAGCACGTCAGGGGATTGCAAAAAGAGACGGAGAAAAGTTTTGCCCGCTGGCACAACGATCTCGAACATCAGGCGACCTGGCTTGAAAGTAAT---CAACTTTCGGATTTCCTCACTGCGCCGGTGCAGGGATCACAGAATGCGTTTGACGTTAACTTTGAGGCCTGGCAGCTGGAGATCAACCATGTGCTGGAAGCCGCC
TRN  10010101100011000
NAM  MCPC_SALTY/43-180
ASQ  SALSYQQQELGGSFQTLIETRVTINRVAIRML-KNQRDPASLDAMNTLLTNAGAS-LNEAEKHFNNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKAD-NYAAYGNLDAQKAQDDMEQVYDQWLSQNAQLIKLA
DSQ  AGCGCACTGAGTTACCAACAACAGGAACTGGGCGGCAGTTTTCAGACATTGATCGAAACCCGCGTCACCATTAACCGCGTGGCGATACGCATGTTA---AAAAATCAGCGCGATCCCGCCTCACTGGACGCCATGAACACGCTGTTAACCAACGCTGGCGCGTCG---CTCAACGAAGCGGAAAAACATTTCAACAACTACGTGAACTCCGAAGCGATCGCGGGCAAAGATCCGGCGTTGGATGCCCAGGCCGAAGCCAGCTTTAAGCAGATGTATGACGTTTTGCAGCAGTCTATCCACTATCTTAAAGCCGAT---AATTACGCCGCCTATGGCAACCTTGACGCGCAAAAAGCGCAGGATGACATGGAGCAGGTATATGACCAGTGGCTCTCTCAAAATGCGCAATTAATAAAATTAGCC
TRN  10010101100011000
NAM  MCPD_ENTAE/43-174
ASQ  LPSVASTDALSLSWVSLLQARNTLNRAGTRGA---EGAAGAGGS--ALMAAPAAR-CKKPISILTSS--STRLARMSRNSSWPMPRVIATRIYALRELIVFLENR-NLQAFMDQPTQKIQDRFEADFVQYLQLAKATTDEA
DSQ  TTACCGTCAGTAGCCAGCACGGATGCGCTTAGCCTGAGCTGGGTATCGCTGTTACAGGCGAGAAATACCCTTAACCGCGCCGGTACCCGCGGCGCT---------GAAGGTGCCGCAGGAGCAGGTGGAAGT------GCGCTGATGGCGGCGCCCGCAGCTCGC---TGCAAAAAGCCGATCTCTATTTTAACCAGTTCC------TCGACACGCCTCGCGCGGATGAGCAGGAACAGCAGTTGGCCGATGCCACGCGTGATAGCTACGAGAATCTACGCGCTGCGCGAACTGATCGTGTTCCTCGAAAATCGC---AACCTGCAGGCCTTTATGGACCAGCCGACGCAGAAAATACAGGACCGCTTTGAGGCCGACTTTGTGCAATATCTGCAGCTGGCGAAGGCGACGACCGATGAAGCC
TRN  10010101100011000
NAM  MCPS_ENTAE/44-183
ASQ  QTIRQQQLLLSESRVDLLQARNSLNRAGIRYM-MDTNKIGSGATIDELLAKAEKEKLARAERNYTAYEKIPQDPRQDPQATEKLKQQYGILYGALSELIQLLGGGCKINAFFDQPTQKYQDDFEQTYNAYLQQNGKLYQIA
DSQ  CAAACCATCCGTCAGCAGCAGTTGCTGCTGAGTGAAAGTCGGGTCGATCTGCTGCAGGCGCGTAACTCCCTGAACCGCGCAGGGATCCGCTACATG---ATGGATACCAACAAAATCGGCAGCGGCGCGACTATCGACGAGCTGCTGGCGAAAGCGGAAAAAGAAAAGCTGGCGCGCGCCGAGCGCAACTACACCGCCTATGAAAAAATCCCGCAGGACCCGCGTCAGGATCCTCAGGCGACGGAAAAGCTTAAGCAGCAGTATGGCATCCTGTACGGCGCGCTGTCGGAGCTGATCCAGCTGCTGGGCGGAGGGTGTAAAATCAACGCCTTCTTCGACCAGCCGACGCAAAAATACCAGGACGATTTCGAGCAGACCTATAACGCCTATCTGCAGCAAAACGGCAAGCTGTATCAAATCGCC
TRN  11011101101011011
NAM  MCP1_ECOLI/44-181
ASQ  QTIRQQQSTLNGSWVALLQTRNTLNRAGIRYM-MDQNNIGSGSTVAELMESASIS-LKQAEKNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAG-KINEFFDQPTQGYQDGFEKQYVAYMEQNDRLHDIA
DSQ  CAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATG---ATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCG---CTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGC---AAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCC
TRN  11011101101011000
NAM  MCP2_SALTY/44-179
ASQ  NELRQQQSELTSTWDLMLQTRINLSRSAARMM-MDASNQQSSAKT-DLLQNAKTT-LAQAAAHYANFKNMTPLP-AMAEASANVDEKYQRYQAALAELIQFLDNG-NMDAYFAQPTQGMQNALGEALGNYARVSENLYRQT
DSQ  AACGAATTACGTCAGCAACAAAGCGAACTCACGTCGACATGGGACTTAATGCTGCAAACGCGCATTAACCTGAGCCGCTCCGCCGCACGCATGATG---ATGGACGCTTCTAACCAGCAGAGCAGCGCCAAAACG---GATTTACTCCAGAATGCAAAAACGACT---CTCGCACAGGCGGCGGCGCACTACGCCAATTTCAAAAATATGACGCCATTGCCA---GCGATGGCGGAGGCCAGCGCGAACGTCGATGAAAAATATCAGCGCTATCAGGCCGCATTAGCCGAACTTATTCAGTTTCTGGACAATGGC---AATATGGATGCCTACTTCGCCCAGCCAACCCAGGGAATGCAAAACGCGTTGGGCGAGGCGCTGGGCAATTACGCCCGGGTGAGCGAAAACCTGTACCGCCAGACA
TRN  11011101101011010
NAM  MCPA_BACSU/33-150
ASQ  AIFAYQSASSSLDRQMMGSALENVQQLNEIIN----TSIGEKE---NSADYFSEW-LTKEKYNAKSN--------------ASIREKFSQYISINKDVESIYTSD-TKGHFTRYPDLPMPSGYNPVERDWYKKAVANKGKV
DSQ  GCGATCTTTGCGTATCAATCGGCTAGCAGCTCACTCGACAGACAGATGATGGGGAGCGCATTGGAAAATGTACAGCAATTAAACGAAATCATTAAC------------ACCAGCATCGGCGAAAAAGAA---------AACAGTGCTGATTATTTCAGCGAATGG---CTGACAAAAGAGAAATACAATGCAAAAAGCAAT------------------------------------------GCAAGCATTCGAGAGAAATTCTCACAATATATCAGCATTAACAAGGATGTAGAATCCATTTATACAAGTGAC---ACAAAAGGGCACTTTACCCGCTATCCGGATCTTCCGATGCCAAGCGGCTATAATCCGGTTGAACGCGACTGGTACAAAAAAGCGGTTGCAAATAAAGGGAAAGTC
TRN  10010101100011000
NAM  TLPB_BACSU/33-150
ASQ  AYFSYQSAWNALDRELISSAKGNVEELNSTLQ----NKLEDKV---KAIDYYSET-VDKDILLGKNK--------------TLLKEKFKQYTTLNDDVGAIYAAS-EDKKLYKYPDSGVPKGFDPTGRDWYKQAVAEKGQA
DSQ  GCATATTTCAGTTATCAATCAGCTTGGAACGCGTTAGACAGAGAGCTCATAAGCAGTGCGAAGGGAAATGTTGAAGAACTAAACAGTACGCTGCAA------------AATAAATTAGAAGATAAAGTA---------AAAGCAATAGATTATTATAGTGAGACA---GTCGATAAAGACATATTGTTAGGCAAAAACAAA------------------------------------------ACATTACTGAAAGAGAAATTTAAGCAGTACACGACACTTAACGACGATGTAGGCGCAATCTATGCTGCCTCA---GAAGATAAGAAGCTTTATAAATATCCGGATAGCGGTGTTCCGAAAGGTTTCGATCCGACAGGACGTGACTGGTACAAACAGGCGGTTGCGGAAAAAGGACAAGCT
TRN  10010101100011000
NAM  O05244_BACSU/36-154
ASQ  EFSSYRSASGKLDQEIMGNAKNSVDTFNTTVT----NDLGEKA---KAVTFFSES-LKRSAFKGKSN-------------QEEIKAKFSQYVSINQGVARIYGGA-DNGTYVQAPKEKLPEGYDPRQRPWYQDAMKAGGEI
DSQ  GAATTTAGCTCTTACCGAAGCGCCAGCGGAAAGCTGGATCAGGAAATTATGGGAAATGCGAAAAACAGTGTCGATACATTTAATACAACTGTTACA------------AATGATCTGGGAGAAAAAGCG---------AAAGCAGTCACCTTTTTCAGTGAATCT---CTTAAAAGATCCGCATTCAAAGGGAAATCAAAT---------------------------------------CAAGAAGAGATCAAAGCTAAATTTTCACAATATGTATCTATTAATCAAGGAGTAGCCAGAATTTATGGGGGCGCA---GATAACGGCACTTATGTACAAGCGCCAAAAGAAAAATTGCCGGAAGGATACGACCCGAGACAACGGCCTTGGTACCAGGATGCGATGAAGGCCGGCGGTGAAATT
TRN  10010101100011001
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